| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007O03 | Sequence | 575 | 012831 (3) | ref|XP_006342512.1| | 2e-107 | PREDICTED: 6-phosphofructokinase 3-like [Solanum tuberosum] | 776 | 001043 (4) | emb|CDP08198.1| | 2e-67 | unnamed protein product [Coffea canephora] |
| JMSF003O08 | Sequence | 214 | 012831 (3) | ref|XP_006342512.1| | 6e-25 | PREDICTED: 6-phosphofructokinase 3-like [Solanum tuberosum] | 696 | 001043 (4) | emb|CDP08198.1| | 6e-68 | unnamed protein product [Coffea canephora] |
| JMSF018F22 | Sequence | 237 | 012831 (3) | ref|XP_006342512.1| | 1e-25 | PREDICTED: 6-phosphofructokinase 3-like [Solanum tuberosum] | 795 | 001043 (4) | ref|XP_009757482.1| | 3e-71 | PREDICTED: ATP-dependent 6-phosphofructokinase 3, partial [Nicotiana sylvestris |
This contig is upended
. : . : . : . : . : . :
JMFF007O03+ TTGTAGTGTCATGACCCCCTCGAGATGTTCCAAGG
____________________________________________________________
consensus TTGTAGTGTCATGACCCCCTCGAGATGTTCCAAGG
. : . : . : . : . : . :
JMFF007O03+ ATTGTACCACCACGTTTATGTATGTCATTTACAAGCTTTGGGGTTAAATTGATGGTATTC
____________________________________________________________
consensus ATTGTACCACCACGTTTATGTATGTCATTTACAAGCTTTGGGGTTAAATTGATGGTATTC
. : . : . : . : . : . :
JMFF007O03+ TTGGCATAGAAACCCCTATAGCCTCCATCAATCCCAAGGACTTTGTTGACACCATACATG
____________________________________________________________
consensus TTGGCATAGAAACCCCTATAGCCTCCATCAATCCCAAGGACTTTGTTGACACCATACATG
. : . : . : . : . : . :
JMFF007O03+ TAATCAAGGCTGTGAACAATTTCCCTGATGACAGTATTTAGGCCAGGGCATAAACCACCA
____________________________________________________________
consensus TAATCAAGGCTGTGAACAATTTCCCTGATGACAGTATTTAGGCCAGGGCATAAACCACCA
. : . : . : . : . : . :
JMFF007O03+ CATGTTACAATGCAGGCATGCACATCATCTGAATTAAAATAAACCTTCTGACGAGGACCA
____________________________________________________________
consensus CATGTTACAATGCAGGCATGCACATCATCTGAATTAAAATAAACCTTCTGACGAGGACCA
. : . : . : . : . : . :
JMFF007O03+ GCACGCCTAAAATGCACCCCTCTTGGACTATCAAGGTGAACAACAACCTTCTGGGGAACT
____________________________________________________________
consensus GCACGCCTAAAATGCACCCCTCTTGGACTATCAAGGTGAACAACAACCTTCTGGGGAACT
. : . : . : . : . : . :
JMSF018F22+ TATCCTCCATGTNTACAAAGTACTGCTTCACAACGGAATATGCAGGATTGGACCGGAGT
JMSF003O08+ TACAAAGTACTGCTTCACAACGGAATATGCAGGATTGGACCGGAGT
JMFF007O03+ GTATCCTCCATGTCTACAAAGTACTGCTTCACAACGGAATATGCAGGATTGGACCGGAGT
____________________________________________________________
consensus GTATCCTCCATGTCTACAAAGTACTGCTTCACAACGGAATATGCAGGATTGGACCGGAGT
. : . : . : . : . : . :
JMSF018F22+ GGGTTTGGATAAGTTGGAAGATCAGGGATGTAATCGGTGAGGTGAGGAACATCTTCAAGC
JMSF003O08+ GGGTTTGGATAAGTTGGAAGATCAGGGATGTAATCGGTGAGGTGAGGAACATCTTCAAGC
JMFF007O03+ GGGTTTGGATAAGTTGGAAGATCAGGGATGTAATCGGTGAGGTGAGGAACATCTTCAAGC
____________________________________________________________
consensus GGGTTTGGATAAGTTGGAAGATCAGGGATGTAATCGGTGAGGTGAGGAACATCTTCAAGC
. : . : . : . : . : . :
JMSF018F22+ ACATAGCCAAAGTCTCCTTTGACGATCTTCATCTGACAATTGCTTTCTCCTCCTCCTGCG
JMSF003O08+ ACATAGCCAAAGTCTCCTTTGACGATCTTCATCTGACAATTGCTTTCTCCTCCTCCTGCG
JMFF007O03+ ACATAGCCAAAGTCTCCTTTGACGATCTTCATCTGACAATTGCTTTCTCCTCCTCCTGCG
____________________________________________________________
consensus ACATAGCCAAAGTCTCCTTTGACGATCTTCATCTGACAATTGCTTTCTCCTCCTCCTGCG
. : . : . : . : . : . :
JMSF018F22+ GCCATCTTCTTCTTCTTTTCCGGATTGTTCTTCAATTTTCGTCTGGGTTTCTTCTCT
JMSF003O08+ GCCATCTTCTTCTTCTTTTCCGGATTGTTCTTCAATTTTCGTC
JMFF007O03+ GCCATCTTCTTCTTCTTTTCCGGATTGTTCTTCAATTTTCGTCTGGGTTTCTTCTCTGCC
____________________________________________________________
consensus GCCATCTTCTTCTTCTTTTCCGGATTGTTCTTCAATTTTCGTCTGGGTTTCTTCTCTGCC