Contig 012819:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005B23Sequence554012819 (3)gb|ACD62902.1|6e-53fruitfull-like protein [Ipomoea nil]768012819 (3)gb|ACD62902.1|2e-111fruitfull-like protein [Ipomoea nil]
JMFN039P18Sequence635012819 (3)gb|ACD62902.1|3e-126fruitfull-like protein [Ipomoea nil]

Alignment

This contig is upended


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rJMFF005B23-                                                             CTACTTAGA
                      ____________________________________________________________
consensus                                                                CTACTTAGA
 
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rJMFF005B23-          TATACATATATATTTTAAAAGATTATATATAGAACAAAAGGTAACTACACTACTTGCTCC
                      ____________________________________________________________
consensus             TATACATATATATTTTAAAAGATTATATATAGAACAAAAGGTAACTACACTACTTGCTCC
 
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rJMFF005B23-          CTATATATGCACCAGCAGTGACAGTGTTATACATATAACCCTTCAAACTATATGTGTATA
                      ____________________________________________________________
consensus             CTATATATGCACCAGCAGTGACAGTGTTATACATATAACCCTTCAAACTATATGTGTATA
 
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rJMFF005B23-          TATATGTATATATATATATAATTACATATATAGTTAGCCTTGTAGGTGGCTAAGCATCCA
                      ____________________________________________________________
consensus             TATATGTATATATATATATAATTACATATATAGTTAGCCTTGTAGGTGGCTAAGCATCCA
 
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rJMFF005B23-          CTGGGGCATGGCACTGGTGTTGTTCTGCTGCTGACGCTGAGTTCCTTCTGTTTCTCCATA
                      ____________________________________________________________
consensus             CTGGGGCATGGCACTGGTGTTGTTCTGCTGCTGACGCTGAGTTCCTTCTGTTTCTCCATA
 
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rJMFF005B23-          CTCTCCTTCACCCTGATATTCTCCTTCACTGCTGAGGTGCACGAGTGGCGGCGGCACAAC
                      ____________________________________________________________
consensus             CTCTCCTTCACCCTGATATTCTCCTTCACTGCTGAGGTGCACGAGTGGCGGCGGCACAAC
 
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rJMFF005B23-          ATAGGAGGAATTTATGTCGTCGTTAGGCTGCTCCCACTGAACCTCCTGCTGCTGCTGCTG
JMFN039P18+                      TTATGTCGTCGTTAGGCTGCTCCCACTGAACCTCCTGCTGCTGCTGCTG
                      ____________________________________________________________
consensus             ATAGGAGGAATTTATGTCGTCGTTAGGCTGCTCCCACTGAACCTCCTGCTGCTGCTGCTG
 
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rJMFF005B23-          CTGAGTAGCCATCTCTTTCTCCCTCTCCTTGATCTTCTTAGAAAGCTGATTATTTTGGTC
JMFN039P18+           CTGAGTAGCCATCTCTTTCTCCCTCTCCTGATTCTTCTTAGAAAGCTGATTATTTTGGTC
                      ____________________________________________________________
consensus             CTGAGTAGCCATCTCTTTCTCCCTCTCCTTGTTCTTCTTAGAAAGCTGATTATTTTGGTC
 
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rJMFF005B23-          CTGCAATGCTTTGTCCTTTTTCTGGAGCACAGAAATGGATTCATACATGAGTTGATTCTT
JMFN039P18+           CTGCAATGCTTTGTCCTTTTTCTGGAGCACAGAAATGGATTCATACATGAGTTGATTCTT
                      ____________________________________________________________
consensus             CTGCAATGCTTTGTCCTTTTTCTGGAGCACAGAAATGGATTCATACATGAGTTGATTCTT
 
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rJMFF005B23-          TTTTGACCGAATATTTTTGAGTGCTGAATCAAGTTGGCGCTCCAGATTCTGAAGCTCTTT
JMFN039P18+           TTTTGACCGAATATTTTTGAGTGCTGAATCAAGTTGGCGCTCCAGATTCTGAAGCTCTTT
                      ____________________________________________________________
consensus             TTTTGACCGAATATTTTTGAGTGCTGAATCAAGTTGGCGCTCCAGATTCTGAAGCTCTTT
 
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rJMFF005B23-          GAGGCTTAAAGAATCTAGGTCTTCTCCCTCATAATGCCTTTGGTTTCTTTGTAGAACCTC
JMFN039P18+           GAGGCTTAAAGAATCTAGGTCTTCTCCCTCATAATGCCTTTGGTTTCTTTGTAGAACCTC
                      ____________________________________________________________
consensus             GAGGCTTAAAGAATCTAGGTCTTCTCCCTCATAATGCCTTTGGTTTCTTTGTAGAACCTC
 
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rJMFF005B23-          CATCCTAGCCTTGAGCTTTGCATGCTCCAGAGTCCAACTTCCTTGTGAGTTTTGATCTGT
JMFN039P18+           CATCCTAGCCTTGAGCTTTGCATGCTCCAGAGTCCAACTTCCTTGTGAGTTTTGATCTGT
JMFF005B23+                                                         GAGTTTTGATCTGT
                      ____________________________________________________________
consensus             CATCCTAGCCTTGAGCTTTGCATGCTCCAGAGTCCAACTTCCTTGTGAGTTTTGATCTGT
 
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rJMFF005B23-          AGAATTCAGTTGCCTCTCTGCATACGAGTATCTTTCATATCGTTCAAGAATCTTTTCCAT
JMFN039P18+           AGAATTCAGTTGCCTCTCTGCATACGAGTATCTTTCATATCGTTCAAGAATCTTTTCCAT
JMFF005B23+           AGAATTCAGTTGCCTCTCTGCATACGAGTATCTTTCATATCGTTCAAGAATCTTTTCCAT
                      ____________________________________________________________
consensus             AGAATTCAGTTGCCTCTCTGCATACGAGTATCTTTCATATCGTTCAAGAATCTTTTCCAT
 
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rJMFF005B23-          GCAAGATTCAGTGGCGTACTCGAAGAGCTTTCCTTTGGT                     
JMFN039P18+           GCAAGATTCAGTGGCGTACTCGAAGAGCTTTCCTTTGGTGGAGAAGACGATGAGTGCAAC
JMFF005B23+           GCAAGATTCAGTGGCGTACTCGAAGAGCTTTCCTTTGGTGGAGAAGACGATGAGTGCAAC
                      ____________________________________________________________
consensus             GCAAGATTCAGTGGCGTACTCGAAGAGCTTTCCTTTGGTGGAGAAGACGATGAGTGCAAC
 
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JMFN039P18+           CTCGGCATCGCAGAGGACGGAAATCTCGTGGGCTTTCTTGAGCAAGCCAGTACGGCGTTT
JMFF005B23+           CTCGGCATCGCAGAGGACGGAAATCTCGTGGGCTTTCTTGAGCAAGCCAGTACGGCGTTT
                      ____________________________________________________________
consensus             CTCGGCATCGCAGAGGACGGAAATCTCGTGGGCTTTCTTGAGCAAGCCAGTACGGCGTTT
 
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JMFN039P18+           GGAGAAGGTGACTTGCCGGTTTATCTTGTTCTCTATTCTCTTCAGTTGCACCCTCCCTCT
JMFF005B23+           GGAGAAGGTGACTTGCCGGTTTATCTTGTTCTCTATTCTCTTCAGTTGCACCCTCCCTCT
                      ____________________________________________________________
consensus             GGAGAAGGTGACTTGCCGGTTTATCTTGTTCTCTATTCTCTTCAGTTGCACCCTCCCTCT
 
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JMFN039P18+           CCCCATTCTTTTTCAAACTCCGATCCGATCCGATCCTCACAGTTTA              
JMFF005B23+           CCCCATTCTTTTTCAAACTCCGATCCGATCCGATCCTCACAGTTTACTGCTACTACTACT
                      ____________________________________________________________
consensus             CCCCATTCTTTTTCAAACTCCGATCCGATCCGATCCTCACAGTTTACTGCTACTACTACT
 
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JMFF005B23+           ACTTCATGGAGGAGGAGAAAGCGGTTGTGAACTGGTGCACATATATATAGACGCGGGTGG
                      ____________________________________________________________
consensus             ACTTCATGGAGGAGGAGAAAGCGGTTGTGAACTGGTGCACATATATATAGACGCGGGTGG
 
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JMFF005B23+           CGGTTTTGGGTGGGGGATAGGCGGTATTGGGAATACCGGAGTGGTTTCGTCGGATTTGTT
                      ____________________________________________________________
consensus             CGGTTTTGGGTGGGGGATAGGCGGTATTGGGAATACCGGAGTGGTTTCGTCGGATTTGTT
 
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JMFF005B23+           TTCGATCGTTCATTGGCTGGAGGGCTGCGGGGGTCGTTAGTGTCCTTCTTGAATCCACAA
                      ____________________________________________________________
consensus             TTCGATCGTTCATTGGCTGGAGGGCTGCGGGGGTCGTTAGTGTCCTTCTTGAATCCACAA
 
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JMFF005B23+           GTTTTAGAGAGTTGCGTCTTGGAAGGGTCCCGGCGAGGATTACTTTTATCCAGATGTGAC
                      ____________________________________________________________
consensus             GTTTTAGAGAGTTGCGTCTTGGAAGGGTCCCGGCGAGGATTACTTTTATCCAGATGTGAC