Contig 012818:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005A06Sequence416012818 (11)ref|XP_009774228.1|1e-50PREDICTED: ATP-citrate synthase alpha chain protein 2 [Nicotiana sylvestris]773012818 (11)gb|KDP23347.1|2e-145hypothetical protein JCGZ_23180 [Jatropha curcas]
JMFF006C08Sequence518012818 (11)ref|XP_009629184.1|1e-70PREDICTED: ATP-citrate synthase alpha chain protein 2 [Nicotiana tomentosiformi773012818 (11)gb|KDP23347.1|1e-144hypothetical protein JCGZ_23180 [Jatropha curcas]
JMFF011B14Sequence470012818 (11)ref|XP_009774228.1|4e-82PREDICTED: ATP-citrate synthase alpha chain protein 2 [Nicotiana sylvestris]745012818 (11)ref|XP_010270942.1|9e-106PREDICTED: ATP-citrate synthase alpha chain protein 2 [Nelumbo nucifera]
JMFF043N14Sequence647012818 (11)ref|XP_009774228.1|3e-106PREDICTED: ATP-citrate synthase alpha chain protein 2 [Nicotiana sylvestris]535012818 (11)emb|CDY31089.1|4e-38BnaA08g26390D [Brassica napus]
JMFF048F01Sequence354012818 (11)ref|XP_009774228.1|4e-58PREDICTED: ATP-citrate synthase alpha chain protein 2 [Nicotiana sylvestris]
JMSF034I01Sequence719012818 (11)ref|XP_009629184.1|7e-154PREDICTED: ATP-citrate synthase alpha chain protein 2 [Nicotiana tomentosiformi649012818 (11)ref|XP_010270942.1|4e-110PREDICTED: ATP-citrate synthase alpha chain protein 2 [Nelumbo nucifera]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF011B14- ACCCTAATTGCTTCCGCGAA
                      ____________________________________________________________
consensus ACCCTAATTGCTTCCGCGAA
 
. : . : . : . : . : . :
rJMFF011B14- CATTCAAAGATAACGCAAATTTCACAACAAATATAAAATATCCGTAAAATTTCAGAAAAC
                      ____________________________________________________________
consensus CATTCAAAGATAACGCAAATTTCACAACAAATATAAAATATCCGTAAAATTTCAGAAAAC
 
. : . : . : . : . : . :
rJMFF043N14- CCACAAAAATATGAGGCTTCCCCCTTATTGCAAAGTTTTTCATAAATTCAGAGAAGG
rJMFF011B14- CATCCACAGAAATATGAGGCTTCCCCCTTATTGCAAAGTTTTTCATAAATTCAGCAAATG
rJMFF006C08- AAGTTTTTCATAAATTCAGCAAATG
rJMFF005A06- AAGTTTTTCATAAATTCAGCAAATG
                      ____________________________________________________________
consensus CATCCACAGAAATATGAGGCTTCCCCCTTATTGCAAAGTTTTTCATAAATTCAGCAAATG
 
. : . : . : . : . : . :
rJMFF043N14- CAGTTTCCTTTCAAGCAGGGAAAAAAAGTCTAAAAAAAGGGGATAAAACCCCAAAGCTTT
rJMFF011B14- CAGTTTCCTTTCAAGCATGGGAAGAGAGTCTGAAAAGAGTGGATGAAACACCAGAGCATT
rJMFF006C08- CAGTTTCCTTTCAAGCATGGGAAGAGAGTCTGAAAAGAGTGGATGAAACACCAGAGCATT
rJMSF034I01- AGCATGGGAAGAGAGTCTGAAAAGAGTGGATGAAACACCAGAGCATT
rJMFF005A06- CAGTTTCCTTTCAAGCATGGGAAGAGAGTCTGAAAAGAGTGGATGAAACACCAGAGCATT
                      ____________________________________________________________
consensus CAGTTTCCTTTCAAGCATGGGAAGAGAGTCTGAAAAGAGTGGATGAAACACCAGAGCATT
 
. : . : . : . : . : . :
rJMFF043N14- GCATGATTTTAAAGGGGGAACTTTTATATCTATGTTTAAAACATAACCCAATCAATACCC
rJMFF011B14- GCATGAATTTAAAAGGGGAACTTTTATATCTATGCTTAAGACATAACGCAATCAATAGCC
rJMFF006C08- GCATGAATTTAAAAGGGGAACTTTTATATCTATGCTTAAGACATAACGCAATCAATAGCC
rJMSF034I01- GCATGAATTTAAAAGGGGAACTTTTATATCTATGCTTAAGACATAACGCAATCAATAGCC
rJMFF005A06- GCATGAATTTAAAAGGGGAACTTTTATATCTATGCTTAAGACATAACGCAATCAATAGCC
                      ____________________________________________________________
consensus GCATGAATTTAAAAGGGGAACTTTTATATCTATGCTTAAGACATAACGCAATCAATAGCC
 
. : . : . : . : . : . :
rJMFF043N14- CGTTTGCAAATGCCAGTCTTTGAACCCTCAGGCCCATAAACCTCTAGGGAAACTCCCAAT
rJMFF011B14- CGTTTGCAAATGCCAGTCATTGTAGCCTCAGGTCCATAAACCTCTAGGGGAACTCCCAAC
rJMFF006C08- CGTTTGCAAATGCCAGTCATTGTAGCCTCAGGTCCATAAACCTCTAGGGGAACTCCCAAC
rJMSF034I01- CGTTTGCAAATGCCAGTCATTGTAGCCTCAGGTCCATAAACCTCTAGGGGAACTCCCAAC
rJMFF005A06- CGTTTGCAAATGCCAGTCATTGTAGCCTCAGGTCCATAAACCTCTAGGGGAACTCCCAAC
                      ____________________________________________________________
consensus CGTTTGCAAATGCCAGTCATTGTAGCCTCAGGTCCATAAACCTCTAGGGGAACTCCCAAC
 
. : . : . : . : . : . :
rJMFF043N14- TCTTCACCCAAGGCACGCTTTTTTGCCAAACCTGTTTGATAATTAGGGCCCCCTCTTCAA
rJMFF011B14- TCTTCACCCAATGCACGCATCTTTGCCAAACCTGTTTGATAATTAGGGCCACCTCTTCGA
rJMFF006C08- TCTTCACCCAATGCACGCATCTTTGCCAAACCTGTTTGATAATTAGGGCCACCTCTTCGA
rJMSF034I01- TCTTCACCCAATGCACGCATCTTTGCCAAACCTGTTTGATAATTAGGGCCACCTCTTCGA
rJMFF005A06- TCTTCACCCAATGCACGCATCTTTGCCAAACCTGTTTGATAATTAGGGCCACCTCTTCGA
                      ____________________________________________________________
consensus TCTTCACCCAATGCACGCATCTTTGCCAAACCTGTTTGATAATTAGGGCCACCTCTTCGA
 
. : . : . : . : . : . :
rJMFF043N14- ACATAAATGTTCTTTCAACCAGTTTTTAACTGGAATCCCTTCCCCCAAAAAGCCCGGATA
rJMFF011B14- ACATAAATGTTCATTCTAGCAGCTTTTAACTTGGATTCCTTCTCCCTAAGAGCCCGGATA
rJMFF006C08- ACATAAATGTTCATTCTAGCAGCTTTTAACTTGGATTCCTTCTCCCTAAGAGCCCGGATA
rJMSF034I01- ACATAAATGTTCATTCTAGCAGCTTTTAACTTGGATTCCTTCTCCCTAAGAGCCCGGATA
rJMFF005A06- ACATAAATGTTCATTCTAGCAGCTTTTAACTTGGATTCCTTCTCCCTAAGAGCCCGGATA
                      ____________________________________________________________
consensus ACATAAATGTTCATTCTAGCAGCTTTTAACTTGGATTCCTTCTCCCTAAGAGCCCGGATA
 
. : . : . : . : . : . :
rJMFF043N14- ATTCCTTTGAAGGTACCAGCACCTTCAGTAAAATTACCAAGGCCCCCTCCAATAAGGAAA
rJMFF011B14- ATTCCATTGAAGGTAGCAGCAACATCAGTAAAATTAGCAATGCCACCTCCAATAATGAGA
rJMFF006C08- ATTCCATTGAAGGTAGCAGCAACATCAGTAAAATTAGCAATGCCACCTCCAATAATGAGA
rJMSF034I01- ATTCCATTGAAGGTAGCAGCAACATCAGTAAAATTAGCAATGCCACCTCCAATAATGAGA
rJMFF005A06- ATTCCATTGAAGGTAGCAGCAACATCAGTAAAATTAGCAATGCCACCTCCAATAATGAGA
                      ____________________________________________________________
consensus ATTCCATTGAAGGTAGCAGCAACATCAGTAAAATTAGCAATGCCACCTCCAATAATGAGA
 
. : . : . : . : . : . :
rJMFF043N14- GCTCTCTTACGGCCATCTGGATCAGCTGGGGCCCAATCAA
rJMFF011B14- GCTCTCTTACGGCCATCTGGATCAGCTGTGGCACAATCAAGAACTACACGAGCATATTGT
rJMFF006C08- GCTCTCTTACGGCCATCTGGATCAGCTGTGGCACAATCAAGAACTACACGAGCATATTGT
rJMSF034I01- GCTCTCTTACGGCCATCTGGATCAGCTGTGGCACAATCAAGAACTACACGAGCATATTGT
rJMFF005A06- GCTCTCTTACGGCCATCTGGATCAGCTGTGGCACAATCAAGAACTACACGAGCATATTGT
                      ____________________________________________________________
consensus GCTCTCTTACGGCCATCTGGATCAGCTGTGGCACAATCAAGAACTACACGAGCATATTGT
 
. : . : . : . : . : . :
rJMFF011B14- AAAACCTCCTCTTCATTTGGAGCTCCACTATATTCTGCATAGTTACCAAGCTCAGATGCA
rJMFF006C08- AAAACCTCCTCTTCATTTGGAGCTCCACTATATTCTGCATAGTTACCAAGCTCAGATGCA
rJMSF034I01- AAAACCTCCTCTTCATTTGGAGCTCCACTATATTCTGCATAGTTACCAAGCTCAGATGCA
rJMFF005A06- AAAACCTCCTCTTCATTTGGAGCTCCACTATATTCTGCATAGTTACCAAGCTCAGATGCA
                      ____________________________________________________________
consensus AAAACCTCCTCTTCATTTGGAGCTCCACTATATTCTGCATAGTTACCAAGCTCAGATGCA
 
. : . : . : . : . : . :
rJMFF011B14- TAGCCTAAATCTCCGACTGTATCAGCATATATTACACTTGCTCCACCTCCAGCAACCATT
rJMFF006C08- TAGCCTAAATCTCCGACTGTATCAGCATATATTACACTTGCTCCACCTCCAGCAACCATT
rJMSF034I01- TAGCCTAAATCTCCGACTGTATCAGCATATATTACACTTGCTCCACCTCCAGCAACCATT
rJMFF005A06- TAGCCTAAATCTCCGACTGTATCAGCATATATTACACTTGCTCCACCTCCAGCAACCATT
                      ____________________________________________________________
consensus TAGCCTAAATCTCCGACTGTATCAGCATATATTACACTTGCTCCACCTCCAGCAACCATT
 
. : . : . : . : . : . :
rJMFF011B14- GTCCAAATTCGACCTTTGGGATTCAAGACAGTAAACTTCNAAGA
rJMFF006C08- GTCCAAATTCGACCTTTGGGATTCAAGACAGTAAACTTCAAAGAGGCACTGGTTTTTTCA
rJMSF034I01- GTCCAAATTCGACCTTTGGGATTCAAGACAGTAAACTTCAAAGAGGCACTGG--TTTTCA
rJMFF005A06- GTCCAAATTCGACCTTTGGGATTCAAGACAGTAAACTTCAAAGAGGCACTGGTTTTTTCA
                      ____________________________________________________________
consensus GTCCAAATTCGACCTTTGGGATTCAAGACAGTAAACTTCAAAGAGGCACTGGTTTTTTCA
 
. : . : . : . : . : . :
rJMFF006C08- TCCAAGGAATGAATAAAACTTTCTGTTGGGCTCAAAACTCTTCCAAAAGGCAGAGGGAAC
rJMSF034I01- TCCAAGGAATGAATAAAACTTTCTGTTGGGCTCAAAACTCTTCCAAAAGGCAGA
rJMFF005A06- TCCAAGGAATGAATAAAACTTTCTGTTGGGCTCAAAACTCTTCCAAAAGGCAGAGGGAAC
                      ____________________________________________________________
consensus TCCAAGGAATGAATAAAACTTTCTGTTGGGCTCAAAACTCTTCCAAAAGGCAGAGGGAAC
 
. : . : . : . : . : . :
rJMFF006C08- TCAATATTGCCCCACTTCTGAAAGTTTTTAAAGGCAGCTGTGTCATCTAACTCTCCTCTC
rJMFF005A06- TCAATATTGCCCCACTTCTGAAAGTTTTTAAAGGCAGCTGTGTCATCTAACTCTCCTCTC
JMSF034I01+ TTCTGAAAGTTTTTAAAGGCAGCTGTGTCATCTAACTCTCCTCTC
                      ____________________________________________________________
consensus TCAATATTGCCCCACTTCTGAAAGTTTTTAAAGGCAGCTGTGTCATCTAACTCTCCTCTC
 
. : . : . : . : . : . :
rJMFF006C08- ATGTCCA
rJMFF005A06- ATGTCCA
JMSF034I01+ ATGTCCAGGGGATATGGTTCACCATTGACAAGCGTAAAGGGATTCATCTCAAGAAAACTG
                      ____________________________________________________________
consensus ATGTCCAGGGGATATGGTTCACCATTGACAAGCGTAAAGGGATTCATCTCAAGAAAACTG
 
. : . : . : . : . : . :
JMSF034I01+ AAGTCCAGGTCTTGAAAAACAGAAAACACACCCAATATAAAATTGCCAATTTTCCCCCGT
                      ____________________________________________________________
consensus AAGTCCAGGTCTTGAAAAACAGAAAACACACCCAATATAAAATTGCCAATTTTCCCCCGT
 
. : . : . : . : . : . :
JMSF034I01+ ACCTCCAAGGGAAGAGTAGCAATCAGTGGTGCGCACACCTCCAGGGTCATAGGCTTTTCA
JMFF043N14+ AGGGAAGAGTAGCAATCAGTGGTGCGCACACCTCCAGGGTCATAGGCTTTCAG
                      ____________________________________________________________
consensus ACCTCCAAGGGAAGAGTAGCAATCAGTGGTGCGCACACCTCCAGGGTCATAGGCTTTTCG
 
. : . : . : . : . : . :
JMSF034I01+ GTTGGAAGGAATACTGTCTTGACCTTGTCCCAGTTTTCTTCAATTTCAATGCCTCCACAT
JMFF006C08+ TGTCCCAGTTTTCTTCAATTTCAATGCCTCCACAT
JMFF043N14+ NTTGGAAGGAATACTGTCTGACCCTTGTCCCAGTTTTCTTCAATTTCAATGCCTCCACAT
                      ____________________________________________________________
consensus GTTGGAAGGAATACTGTCTTGCCCTTGTCCCAGTTTTCTTCAATTTCAATGCCTCCACAT
 
. : . : . : . : . : . :
JMFF011B14+ TGAGAAGCTAATGGTACACCCTAACCTTTCAGATACTATTGAAAGATAATACTCCTCG
JMSF034I01+ TCTGAGAAGCTAATGGTACACCCTAACCTTTCAGATACTATTGAAAGATAATACTCCTCG
JMFF006C08+ TCTGAGAAGCTAATGGTACACCCTAACCTTTCAGATACTATTGAAAGATAATACTCCTCG
JMFF043N14+ TCTGAGAAGCTAATGGTACACCCTAACCTTTCAGATACTATGNAAAGATAATACTCCTCG
                      ____________________________________________________________
consensus TCTGAGAAGCTAATGGTACACCCTAACCTTTCAGATACTATTGAAAGATAATACTCCTCG
 
. : . : . : . : . : . :
JMFF011B14+ GCATGGGGAACAAATGGTTCAACAATGAAGGTTGTAATAGGTGCTTTGCAGCCACCCATC
JMSF034I01+ GCATGGGGAACAAATGGTTCAACAATGAAGGTTGTAATAGGTGCTTTGCAGCCACCCATC
JMFF006C08+ GCATGGGGAACAAATGGTTCAACAATGAAGGTTGTAATAGGTGCTTTGCAGCCACCCATC
JMFF048F01+ TAGGTGCTTTGCAGCCACCCATC
JMFF043N14+ GCATGGGGAACAAATGGTTCAACAATGAAGGTTGTAATAGGTGCTTTGCAGCCACCCATC
                      ____________________________________________________________
consensus GCATGGGGAACAAATGGTTCAACAATGAAGGTTGTAATAGGTGCTTTGCAGCCACCCATC
 
. : . : . : . : . : . :
JMFF011B14+ TCAACCTCCACA-CCAAGACGTGCTTTGACAAATTCAGCAACTTCTGCTAGATCCAACTT
JMSF034I01+ TCAACCTCCACA-CCAAGACGTGCTTTGACAAATTCAGCAACTTCTGCTAGATCCAACTT
JMFF006C08+ TCAACCTCCACACCCAAGACGTGCTTTGACAAATTCAGCAACTTCTGCTAGATCCAACTT
JMFF048F01+ TCAACCTCCACA-CCAAGACGTGCTTTGACAAATTCAGCAACTTCTGCTAGATCCAACTT
JMFF043N14+ TCAACCTCCACA-CCAAGACGTGCTTTGACAAATTCAGCAACTTCTGCTAGATCCAACTT
JMFF005A06+ ACCTCCACA-CCAAGACGTGCTTTGACAAATTCAGCAACTTCTGCTAGATCCAACTT
                      ____________________________________________________________
consensus TCAACCTCCACA-CCAAGACGTGCTTTGACAAATTCAGCAACTTCTGCTAGATCCAACTT
 
. : . : . : . : . : . :
JMFF011B14+ CAAAGCCACCAAGCCACTCTTTCCACGCTTCCCAAACAACATGTCTGGTTTTACAACCAA
JMSF034I01+ CAAAGCCACCAAGCCACTCTTTCCACGCTTCCCAAACAACATGTCTGGTTTTACAACCAA
JMFF006C08+ CAAAGCCACCAAGCCACTCTTTCCACGCTTCCCAAACAACATGTCTGGTTTTACAACCAA
JMFF048F01+ CAAAGCCACCAAGCCACTCTTTCCACGCTTCCCAAACAACATGTCTGGTTTTACAACCAA
JMFF043N14+ CAAAGCCACCAAGCCACTCTTTCCACGCTTCCCAAACAACATGTCTGGTTTTACAACCAA
JMFF005A06+ CAAAGCCACCAAGCCACTCTTTCCACGCTTCCCAAACAACATGTCTGGTTTTACAACCAA
                      ____________________________________________________________
consensus CAAAGCCACCAAGCCACTCTTTCCACGCTTCCCAAACAACATGTCTGGTTTTACAACCAA
 
. : . : . : . : . : . :
JMFF011B14+ TTTTGTGGACGAAAGCCATGGTTCTTTGTTTGTTAACTCAGCAAAATCCGTAGATTCTGT
JMSF034I01+ TTTTGTGGACGAAAGCCATGGTTCTTTGTTTGTTAACTCAGCAAAATCCGTAGATTCTGT
JMFF006C08+ TTTTGTGGACGAAAGCCATGGTTCTTTGTTTGTTAACTCAGCAAAATCCGTAGATTCTGT
JMFF048F01+ TTTTGTGGACGAAAGCCATGGTTCTTTGTTTGTTAACTCAGCAAAATCCGTAGATTCTGT
JMFF043N14+ TTTTGTGGACGAAAGCCATGGTTCTTTGTTTGTTAACTCAGCAAAATCCGTAGATTCTGT
JMFF005A06+ TTTTGTGGACGAAAGCCATGGTTCTTTGTTTGTTAACTCAGCAAAATCCGTAGATTCTGT
                      ____________________________________________________________
consensus TTTTGTGGACGAAAGCCATGGTTCTTTGTTTGTTAACTCAGCAAAATCCGTAGATTCTGT
 
. : . : . : . : . : . :
JMFF011B14+ TACTTGAGCAGAGCAGATCTGTAGGTCGATGCCAGACAGACGCTTCAAATGCTCCTTCAG
JMSF034I01+ TACTTGAGCAGAGCAGATCTGTAGGTCGATGCCAGACAGACGCTTCAAATGCTCCTTCAG
JMFF006C08+ TACTTGAGCAGAGCAGATCTGTAGGTCGATGCCAGACAGACGCTTCAAATGCTCCTTCAG
JMFF048F01+ TACTTGAGCAGAGCAGATCTGTAGGTCGATGCCAGACAGACGCTTCAAATGCTCCTTCAG
JMFF043N14+ TACTTGAGCAGAGCAGATCTGTAGGTCGATGCCAGACAGACGCTTCAAATGCTCCTTCAG
JMFF005A06+ TACTTGAGCAGAGCAGATCTGTAGGTCGATGCCAGACAGACGCTTCAAATGCTCCTTCAG
                      ____________________________________________________________
consensus TACTTGAGCAGAGCAGATCTGTAGGTCGATGCCAGACAGACGCTTCAAATGCTCCTTCAG
 
. : . : . : . : . : . :
JMFF011B14+ AACCCTCTTAGAATCGTACTCTCTGATCTTCTTCCTTGCCATATCACTACGCCC
JMSF034I01+ AACCCTCTTAGAATCGTACTCTCTGATCTTCTTCCTTGCCATATCACTACGCCCTGCCGC
JMFF006C08+ AACCCTCTTAGAATCGTACTCTCTGATCTTCTTCCTTGCCATATCACTACGCCCTGCCGC
JMFF048F01+ AACCCTCTTAGAATCGTACTCTCTGATCTTCTTCCTTGCCATATCACTACGCCCTGCCGC
JMFF043N14+ AACCCTCTTAGAATCGTACTCTCTGATCTTCTTCCTTGCCATATCACTACGCCCTGCCGC
JMFF005A06+ AACCCTCTTAGAATCGTACTCTCTGATCTTCTTCCTTGCCATATCACTACGCCCTGCCGC
                      ____________________________________________________________
consensus AACCCTCTTAGAATCGTACTCTCTGATCTTCTTCCTTGCCATATCACTACGCCCTGCCGC
 
. : . : . : . : . : . :
JMSF034I01+ C
JMFF006C08+ C
JMFF043N14+ CAATCGAAAAGGAGAAAGAAACAGAAGGGCTTTGCTTTGCAGTCAAGTATAGGCTCACCC
JMFF005A06+ CAATCGAAAAGGAGAAAGAAACAGAAGGGCTTTGCTTTGCAGTCAAGTATAGGCTCACCC
                      ____________________________________________________________
consensus CAATCGAAAAGGAGAAAGAAACAGAAGGGCTTTGCTTTGCAGTCAAGTATAGGCTCACCC
 
. : . : . : . : . : . :
JMFF043N14+ GACACCCAACTTCAACAACTCCACAGCTGAGACTCCTGAGAGTGAGAGAGAGTGA
JMFF005A06+ GACACCCAACTTCAACAACTCCACAGCTGAGACTCCTGAGAGTGAGAGAGAGTGAGAGAG
                      ____________________________________________________________
consensus GACACCCAACTTCAACAACTCCACAGCTGAGACTCCTGAGAGTGAGAGAGAGTGAGAGAG