Contig 012816:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP018C11Sequence596012816 (5)ref|XP_009758756.1|6e-49PREDICTED: protein NRT1/ PTR FAMILY 5.8 [Nicotiana sylvestris] ref|XP_009758757.
JMFF004K03Sequence537012816 (5)ref|XP_006338515.1|5e-42PREDICTED: probable peptide/nitrate transporter At5g14940-like [Solanum tuberos706012377 (3)ref|XP_009758756.1|3e-96PREDICTED: protein NRT1/ PTR FAMILY 5.8 [Nicotiana sylvestris] ref|XP_009758757.
JMFF017C24Sequence546012816 (5)ref|XP_009758756.1|3e-82PREDICTED: protein NRT1/ PTR FAMILY 5.8 [Nicotiana sylvestris] ref|XP_009758757.748012377 (3)ref|XP_009758756.1|1e-94PREDICTED: protein NRT1/ PTR FAMILY 5.8 [Nicotiana sylvestris] ref|XP_009758757.
JMFF036H07Sequence551012816 (5)ref|XP_009758756.1|5e-84PREDICTED: protein NRT1/ PTR FAMILY 5.8 [Nicotiana sylvestris] ref|XP_009758757.699012377 (3)ref|XP_009758756.1|4e-84PREDICTED: protein NRT1/ PTR FAMILY 5.8 [Nicotiana sylvestris] ref|XP_009758757.
JMFF050M04Sequence587012816 (5)ref|XP_006338515.1|2e-44PREDICTED: probable peptide/nitrate transporter At5g14940-like [Solanum tuberos412019192ref|XP_004232263.1|1e-15PREDICTED: protein NRT1/ PTR FAMILY 5.8-like [Solanum lycopersicum] ref|XP_01031

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF036H07+ GTCCTGGATATACGACAAGACTGAGACTCC
JMFF017C24+ GGATATACGACAAGACTGAGACTCC
                      ____________________________________________________________
consensus GTCCTGGATATACGACAAGACTGAGACTCC
 
. : . : . : . : . : . :
JMFF036H07+ CAGAAGACTGCCGCAGCAAATGCCGAAATACCACCACTGGAAGAACAAACTCTTCTTGAC
JMFF017C24+ CAGAAGACTGCCGCAGCAAATGCCGAAATACCACCACTGGAAGAACAAACTCTTCTTGAC
                      ____________________________________________________________
consensus CAGAAGACTGCCGCAGCAAATGCCGAAATACCACCACTGGAAGAACAAACTCTTCTTGAC
 
. : . : . : . : . : . :
JMFF036H07+ GGAGCTCTTGTCGCCGTTCTTGGTTGACGGCAGCTCGCCGTCGTCTTCATCTCCAAGCTG
JMFF017C24+ GGAGCTCTTGTCGCCGTTCTTGGTTGACGGCAGCTCGCCGTCGTCTTCATCTCCAAGCTG
                      ____________________________________________________________
consensus GGAGCTCTTGTCGCCGTTCTTGGTTGACGGCAGCTCGCCGTCGTCTTCATCTCCAAGCTG
 
. : . : . : . : . : . :
JMFF036H07+ ATCCGCCGCGAAGGCCTGCAAGGATGGGTTGTAGCCACCCAGGCCCAGTGAAATTAAGTG
JMFF017C24+ ATCCGCCGCGAAGGCCTGCAAGGATGGGTTGTAGCCACCCAGGCCCAGTGAAATTAAGTG
JMCP018C11+ CCCAGGCCCAGTGAAATTAAGTG
JMFF050M04+ G
                      ____________________________________________________________
consensus ATCCGCCGCGAAGGCCTGCAAGGATGGGTTGTAGCCACCCAGGCCCAGTGAAATTAAGTG
 
. : . : . : . : . : . :
JMFF036H07+ GAGCGGCCATGAGAGGGAAGAAGAGCTAATTTTCTGGGCATTATTACTCCCCGGCGGCCA
JMFF017C24+ GAGCGGCCATGAGAGGGAAGAAGAGCTAATTTTCTGGGCATTATTACTCCCCGGCGGCCA
JMCP018C11+ GAGCGGCCATGAGAGGGAAGAAGAGCTAATTTTgaGGGCATTATTACTCCCCGGCGGCCA
JMFF050M04+ GAGCGGCCATGAGAGGGAAGAAGAGCTAATNTTCTGGGCA-TATTACTCCCCGGCGGCCA
                      ____________________________________________________________
consensus GAGCGGCCATGAGAGGGAAGAAGAGCTAATTTTCTGGGCATTATTACTCCCCGGCGGCCA
 
. : . : . : . : . : . :
JMFF036H07+ CCCCATCGCCGTTGATGTCAACGCTATCAGCCCCAGAATATAGAAAAATGCAGAGCCTAA
JMFF017C24+ CCCCATCGCCGTTGATGTCAACGCTATCAGCCCCAGAATATAGAAAAATGCAGAGCCTAA
JMCP018C11+ CCCCATCGCCGTTGATGTCAACGCTATCAGCCCCAGAATATAGAAAAATGCAGAGCCTAA
JMFF050M04+ CCCCATCGCCGTTGATGTCAACGCTATCAGCCCCAGAATATAGAAAAATGCAGAGCCTAA
JMFF004K03+ CATCGCCGTTGATGTCAACGCTATCAGCCCCAGAATATAGAAAAATGCAGAGCCTAA
                      ____________________________________________________________
consensus CCCCATCGCCGTTGATGTCAACGCTATCAGCCCCAGAATATAGAAAAATGCAGAGCCTAA
 
. : . : . : . : . : . :
JMFF036H07+ AATAGTTGAATAGCTATCCAAGTAAGAGTCGGCCAACGGCGCCACCAGCAGCGGCACCAT
JMFF017C24+ AATAGTTGAATAGCTATCCAAGTAAGAGTCGGCCAACGGCGCCACCAGCAGCGGCACCAT
JMCP018C11+ AATAGTTGAATAGCTATCCAAGTAAGAGTCGGCCAACGGCGCCACCAGCAGCGGCACCAT
JMFF050M04+ AATAGTTGAATAGCTATCCAAGTAAGAGTCGGCCAACGGCGCCACCAGCAGCGGCACCAT
JMFF004K03+ AATAGTTGAATAGCTATCCAAGTAAGAGTCGGCCAACGGCGCCACCAGCAGCGGCACCAT
                      ____________________________________________________________
consensus AATAGTTGAATAGCTATCCAAGTAAGAGTCGGCCAACGGCGCCACCAGCAGCGGCACCAT
 
. : . : . : . : . : . :
JMFF036H07+ AGAGGTGAAGCCACACCAATTGTTGACCAGCTTCGCCGCCGACGAGTTGCTCATCTTCGC
JMFF017C24+ AGAGGTGAAGCCACACCAATTGTTGACCAGCTTCGCCGCCGACGAGTTGCTCATCTTCGC
JMCP018C11+ AGAGGTGAAGCCACACCAATTGTTGACCAGCTTCGCCGCCGACGAGTTGCTCATCTTCGC
JMFF050M04+ AGAGGTGAAGCCACACCAATTGTTGACCAGCTTCGCCGCCGACGAGTTGCTCATCTTCGC
JMFF004K03+ AGAGGTGAAGCCACACCAATTGTTGACCAGCTTCGCCGCCGACGAGTTGCTCATCTTCGC
                      ____________________________________________________________
consensus AGAGGTGAAGCCACACCAATTGTTGACCAGCTTCGCCGCCGACGAGTTGCTCATCTTCGC
 
. : . : . : . : . : . :
JMFF036H07+ CACATCCGTGAGATACGTCACCAAATTCGCCGCCACGCCTTTGAACGTGAACCTCTCCAT
JMFF017C24+ CACATCCGTGAGATACGTCACCAAATTCGCCGCCACGCCTTTGAACGTGAACCTCTCCAT
JMCP018C11+ CACATCCGTGAGATACGTCACCAAATTCGCCGCCACGCCTTTGAACGTGAACCTCTCCAT
JMFF050M04+ CACATCCGTGAGATACGTCACCAAATTCGCCGCCACGCCTTTGAACGTGAACCTCTCCAT
JMFF004K03+ CACATCCGTGAGATACGTCACCAAATTCGCCGCCACGCCTTTGAACGTGAACCTATCCAT
                      ____________________________________________________________
consensus CACATCCGTGAGATACGTCACCAAATTCGCCGCCACGCCTTTGAACGTGAACCTCTCCAT
 
. : . : . : . : . : . :
JMFF036H07+ CCCCGCTATCACTATGAGGAGAATGCATGGCTTGTTAAGAC
JMFF017C24+ CCCCGCTATCACTATGAGGAGAATGCATGGCTTGTTAAGAC
JMCP018C11+ CCCCGCTATCACTATGAGGAGAATGCATGGCTTGTTCAGACCTTGCCCGCCCGCCATGGC
JMFF050M04+ CCCCGCTATCACTATGAGGAGAATGCATGGCTTGTTCAGACCTTGCCCGCCCGCCATGGC
JMFF004K03+ CCCCGCTATCACTATGAGGAGAATGCATGGCTTGTTCAGACCTTGCCCGCCCGCCATGGC
                      ____________________________________________________________
consensus CCCCGCTATCACTATGAGGAGAATGCATGGCTTGTTCAGACCTTGCCCGCCCGCCATGGC
 
. : . : . : . : . : . :
JMCP018C11+ TAGCTACAACGTACTAGATCAGAACGAAGATGGAGTAATAATGAACAGAAACCTGAG
JMFF050M04+ TAGCTACAACGTACTAGATCAGAACGAAGATGGAGTAATAATGAACAGAAACCTGAGATT
JMFF004K03+ TAGCTACAACGTACTAGATCAGAACGAAGATGGAGTAATAATGAACAGAAACCTGAGATT
                      ____________________________________________________________
consensus TAGCTACAACGTACTAGATCAGAACGAAGATGGAGTAATAATGAACAGAAACCTGAGATT
 
. : . : . : . : . : . :
JMFF050M04+ CATATAATAATATATTTAATTAATTAGCCATTGAAGCACCAATAAGGTGGGGATGGGGGC
JMFF004K03+ CATATAATAATATATTTAATTAATTAGCCATTGAAGCACCAATAAGGTGGGGATGGGGGC
                      ____________________________________________________________
consensus CATATAATAATATATTTAATTAATTAGCCATTGAAGCACCAATAAGGTGGGGATGGGGGC
 
. : . : . : . : . : . :
JMFF050M04+ ACTGCTCTACTTGACCAAGATTCTATATCATGGCCGCCTCTTTGCTAGCTTTTACAAATT
JMFF004K03+ ACTGCTCTACTTGACCAAGATTCTATATCATGGCCGCCTCTTTGCTAGCTTTTACAAATT
                      ____________________________________________________________
consensus ACTGCTCTACTTGACCAAGATTCTATATCATGGCCGCCTCTTTGCTAGCTTTTACAAATT
 
. : . : . : . : . : . :
JMFF050M04+ GTAGTGGAACACTGGACAATCACTCATCTGCTTGCTTTTCCAAAGT
JMFF004K03+ GTAGTGGAACACTGGACAATCACTCATCTGCTTGCTTTTCCAAAGTAAATTGTGACACAT
                      ____________________________________________________________
consensus GTAGTGGAACACTGGACAATCACTCATCTGCTTGCTTTTCCAAAGTAAATTGTGACACAT