Contig 012808:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002H23Sequence445012808 (8)ref|NP_001275397.1|3e-31glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform [Solanum tuberosum] gb134004352 (6)
JMFF021L10Sequence497012808 (8)sp|P37830.1|G6PD_SOLTU1e-52RecName: Full=Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform; Short=G609004352 (6)ref|XP_006852171.1|6e-68hypothetical protein AMTR_s00049p00097260 [Amborella trichopoda] gb|ERN13638.1|
JMFF039N23Sequence186012808 (8)
JMFS152G08Sequence607012808 (8)sp|P37830.1|G6PD_SOLTU7e-60RecName: Full=Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform; Short=G
JMFS166F05Sequence620012808 (8)sp|P37830.1|G6PD_SOLTU2e-88RecName: Full=Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform; Short=G
JMSF009B22Sequence315012808 (8)ref|NP_001275397.1|2e-20glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform [Solanum tuberosum] gb767004352 (6)ref|XP_006852171.1|4e-109hypothetical protein AMTR_s00049p00097260 [Amborella trichopoda] gb|ERN13638.1|
JMSF018L23Sequence191012808 (8)704004352 (6)ref|XP_006852171.1|5e-85hypothetical protein AMTR_s00049p00097260 [Amborella trichopoda] gb|ERN13638.1|
JMSF040I11Sequence707012808 (8)ref|XP_006338664.1|6e-103PREDICTED: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like isofor872004352 (6)ref|XP_006852171.1|1e-110hypothetical protein AMTR_s00049p00097260 [Amborella trichopoda] gb|ERN13638.1|

Alignment

This contig is upended


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JMSF040I11+                                                          AGCTGNAGCCAAA
                      ____________________________________________________________
consensus                                                            AGCTGNAGCCAAA
 
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JMFS166F05+                                                          ATCAGATTTATTC
JMSF040I11+           TCCCTACCAAAGGGCTTCTCAACAACGATGCGTGTCCATCCACCAAGATCAGATTTATTC
                      ____________________________________________________________
consensus             TCCCTACCAAAGGGCTTCTCAACAACGATGCGTGTCCATCCACCAAGATCAGATTTATTC
 
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JMFS166F05+           ATGCAATAAAACTTTATCATTCTGCACACAGATGGATATACTGATGGAGNAAGTGCAAGG
JMSF040I11+           ATGCAATAAAACTTTATCATTCTGCACACAGATGGATATACTGATGGAGGAAGTGCAAGG
                      ____________________________________________________________
consensus             ATGCAATAAAACTTTATCATTCTGCACACAGATGGATATACTGATGGAGGAAGTGCAAGG
 
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JMFS166F05+           TAGAAGAGCCTTCTGGAAGATCCTTCAGTGCTATTTTTTGATACTTCATGCTCATATATT
JMSF040I11+           TAGAAGAGCCTTCTGGAAGATCCTTCAGTGCTATTTTTTGATACTTCATGCTCATATATT
JMFS152G08+                                                   ATACTTCATGCTCATATATG
                      ____________________________________________________________
consensus             TAGAAGAGCCTTCTGGAAGATCCTTCAGTGCTATTTTTTGATACTTCATGCTCATATATT
 
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JMFS166F05+           GCCTTATCTAATGACCGAAATCCCTCCTCGGAGTCATAACCACCAGATACATATTTTATC
JMSF040I11+           GCCTTATCTAATGACCGAAATCCCTCCTCGGAGTCATAACCACCAGATACATATTTTATC
JMFF021L10+                                    CCTCGGAGTCATAACCACCAGATACATATTTTATC
JMFS152G08+           CCCTTATCTAATGACCGAAATCCCTCCTCGGAGTCATAACCACCAGATACATATTTTATC
                      ____________________________________________________________
consensus             GCCTTATCTAATGACCGAAATCCCTCCTCGGAGTCATAACCACCAGATACATATTTTATC
 
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JMFS166F05+           AATTGCAGAAAATTTGGAACAGTTTCTGCATTATCTTTTCCCGGGGAAAGATACCCACGA
JMSF040I11+           AATTGCAGAAAATTTGGAACAGTTTCTGCATTATCTTTTCCCGGGGAAAGATACCCACGA
JMFF021L10+           AATTGCAGAAAATTTGGAACAGTTTCTGCATTATCTTTTCCCGGGGAAAGATACCCACGA
JMFS152G08+           AATTGCAGAAAATTTGGAACAGTTTCTGCATTATCTTTTCCCGGGGAAAGATACCCACGA
                      ____________________________________________________________
consensus             AATTGCAGAAAATTTGGAACAGTTTCTGCATTATCTTTTCCCGGGGAAAGATACCCACGA
 
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JMFS166F05+           ATACGGTCTCTCAAGTCATCATCTGAAATTTTGGTCCTTGCATAGCCAAAAATGTGAACG
JMSF040I11+           ATACGGTCTCTCAAGTCATCATCTGAAATTTTGGTCCTTGCATAGCCAAAAATGTGAACG
JMFF021L10+           ATACGGTCTCTCAAGTCATCATCTGAAATTTTGGTCCTTGCATAGCCAAAAATGTGAACG
JMFS152G08+           ATACGGTCTCTCAAGTCATCATCTGAAATTTTGGTCCTTGCATAGCCAAAAATGTGAACG
JMFF002H23+                                              CCTTGCATAGCCAAAAATGTGAACG
                      ____________________________________________________________
consensus             ATACGGTCTCTCAAGTCATCATCTGAAATTTTGGTCCTTGCATAGCCAAAAATGTGAACG
 
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JMFS166F05+           TCATTAGATTGCAAGAACCCCTGGTGGTAGAGGTTGAACAGTGCAGGAAAAGTCTTCTTT
JMSF040I11+           TCATTAGATTGCAAGAACCCCTGGTGGTAGAGGTTGAACAGTGCAGGAAAAGTCTTCTTT
JMFF021L10+           TCATTAGATTGCAAGAACCCCTGGTGGTAGAGGTTGAACAGTGCAGGAAAAGTCTTCTTT
JMSF009B22+                               CTGGTGGTAGAGGTTGAACAGTGCAGGAAAAGTCTTCTTT
JMFS152G08+           TCATTAGATTGCAAGAACCCCTGGTGGTAGAGGTTGAACAGTGCAGGAAAAGTCTTCTTT
JMFF002H23+           TCATTAGATTGCAAGAACCCCTGGTGGTAGAGGTTGAACAGTGCAGGAAAAGTCTTCTTT
                      ____________________________________________________________
consensus             TCATTAGATTGCAAGAACCCCTGGTGGTAGAGGTTGAACAGTGCAGGAAAAGTCTTCTTT
 
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JMFS166F05+           TTGGCAAGATCACCAGAAGCACCAAGAACAACAATGGAGAGGCACCCAGTTTCAGTCACA
JMSF040I11+           TTGGCAAGATCACCAGAAGCACCAAGAACAACAATGGAGAGGCACCCAGTTTCAGTCACA
JMFF021L10+           TTGGCAAGATCACCAGAAGCACCAAGAACAACAATGGAGAGGCACCCAGTTTCAGTCACA
JMSF009B22+           TTGGCAAGATCACCAGAAGCACCAAGAACAACAATGGAGAGGCACCCAGTTTCAGTCACA
JMFS152G08+           TTGGCAAGATCACCAGAAGCACCAAGAACAACAATGGAGAGGCACCCAGTTTCAGTCACA
JMFF002H23+           TTGGCAAGATCACCAGAAGCACCAAGAACAACAATGGAGAGGCACCCAGTTTCAGTCACA
                      ____________________________________________________________
consensus             TTGGCAAGATCACCAGAAGCACCAAGAACAACAATGGAGAGGCACCCAGTTTCAGTCACA
 
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JMFS166F05+           CCTTCAATGTCTGCAAAGGAGTCATTGCTAACAAGACCCCTTTTCTCCACACACCATTGT
JMSF040I11+           CCTTCAATGTCTGCAAAGGAGTCATTGCTAACAAGACCCCTTTTCTCCACACACCATTGT
JMFF021L10+           CCTTCAATGTCTGCAAAGGAGTCATTGCTAACAAGACCCCTTTTCTCCACACACCATTGT
JMSF009B22+           CCTTCAATGTCTGCAAAGGAGTCATTGCTAACAAGACCCCTTTTCTCCACACACCATTGT
JMSF018L23+                        CAAAGGAGTCATTGCTAACAAGACCCCTTTTCTCCACACACCATTGT
JMFF039N23+                                                               ACCATTGT
JMFS152G08+           CCTTCAATGTCTGCAAAGGAGTCATTGCTAACAAGACCCCTTTTCTCCACACACCATTGT
JMFF002H23+           CCTTCAATGTCTGCAAAGGAGTCATTGCTAACAAGACCCCTTTTCTCCACACACCATTGT
                      ____________________________________________________________
consensus             CCTTCAATGTCTGCAAAGGAGTCATTGCTAACAAGACCCCTTTTCTCCACACACCATTGT
 
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JMFS166F05+           GCAGATTCCATCTTAAAAGCTTCTAGTCTAGTGAGAAGCCCAAATTCAATTACTTGTTCA
JMSF040I11+           GCAGATTCCATCTTAAAAGCTTCTAGTCTAGTGAGAAGCCCAAATTCAATTACTTGTTCA
JMFF021L10+           GCAGATTCCATCTTAAAAGCTTCTAGTCTAGTGAGAAGCCCAAATTCAATTACTTGTTCA
JMSF009B22+           GCAGATTCCATCTTAAAAGCTTCTAGTCTAGTGAGAAGCCCAAATTCAATTACTTGTTCA
JMSF018L23+           GCAGATTCCATCTTAAAAGCTTNTAGTCTAGTGAGAAGCCCAAATTCAATTACTTGTTCA
JMFF039N23+           GCAGATTCCATCTTAAAAGCTTTTAGTCTAGTGAGAAGCCCAAATTCAATTACTTGTTCA
JMFS152G08+           GCAGATTCCATCTTAAAAGCTTCTAGTCTAGTGAGAAGCCCAAATTCAATTACTTGTTCA
JMFF002H23+           GCAGATTCCATCTTAAAAGCTTCTAGTCTAGTGAGAAGCCCAAATTCAATTACTTGTTCA
                      ____________________________________________________________
consensus             GCAGATTCCATCTTAAAAGCTTCTAGTCTAGTGAGAAGCCCAAATTCAATTACTTGTTCA
 
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JMFS166F05+           CAGTAGTATCACTTAGCTAGAACCTCCTGATCTTAAAGCTCACAGAAGAGAGGTGAAGAG
JMSF040I11+           CAGTAGTATCACTTAGCTAGAACCTCCTGATCTTAAAGCTCACAGAAGAGAGGTGAAGAG
JMFF021L10+           CAGTAGTATCACTTAGCTAGAACCTCCTGATCTTAAAGCTCACAGAAGAGAGGTGAAGAG
JMSF009B22+           CAGTAGTATCACTTAGCTAGAACCTCCTGATCTTAAAGCTCACAGAAGAGAGGTGAAGAG
JMSF018L23+           CNGTAGTATCACTTAGCTAGAACCTCCTGATCNTAAAGCTCACAGAAGAGAGGTGAAGAG
JMFF039N23+           CAGTAGTATCACNTAGNTAGAACCTCNTGATCTTAAAGCTCACAGAAGAGAGGTGAAGAG
JMFS152G08+           CAGTAGTATCACTTAGCTAGAACCTCCTGATCTTAAAGCTCACAGAAGAGAGGTGAAGAG
JMFF002H23+           CAGTAGTATCACTTAGCTAGAACCTCCTGATCTTAAAGCTCACAGAAGAGAGGTGAAGAG
                      ____________________________________________________________
consensus             CAGTAGTATCACTTAGCTAGAACCTCCTGATCTTAAAGCTCACAGAAGAGAGGTGAAGAG
 
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JMFS166F05+           CGA                                                         
JMSF040I11+           CGAAGAAGCTGGAAGAGTGATACACCGTTCAG                            
JMFF021L10+           CGAAGAAGCTGGAAGAGTGATACACCGTTCAGTAGGGAAGCC                  
JMSF009B22+           CGAAGAGGCTGGAAGAGTGATACACCGTTCAGT                           
JMSF018L23+           CGAAGAAGCTGGAAGAGTGATA                                      
JMFF039N23+           CGAAGAAGCTGGAAGAGTGATACACCGTTCAGTAGGGAAGCCAATAATAATAATAGGC  
JMFS152G08+           CGAAGAAGCTGGAAGAGTGATACACCGTTCAGTAGGGAAGCCAATAATAATAATAGGCGA
JMFF002H23+           CGAAGAAGCTGGAAGAGTGATACACCGTTCAGTAGGGAAGCCAATAATAATAATAGGCGA
                      ____________________________________________________________
consensus             CGAAGAAGCTGGAAGAGTGATACACCGTTCAGTAGGGAAGCCAATAATAATAATAGGCGA
 
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JMFS152G08+           ATAAAATTAGTAGAATCTCCAGAAGGAAATGAAAACACAATAGGAAA             
JMFF002H23+           ATAAAATTAGTAGAATCTCCAGAAGGAAATGAAAACACAATAGGAAACGGACAGTAGAAC
                      ____________________________________________________________
consensus             ATAAAATTAGTAGAATCTCCAGAAGGAAATGAAAACACAATAGGAAACGGACAGTAGAAC