| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001C13 | Sequence | 457 | 012805 (6) | 424 | 013590 (2) | ||||||
| JMFF013P24 | Sequence | 595 | 012805 (6) | ref|XP_002526718.1| | 8e-36 | nucleic acid binding protein, putative [Ricinus communis] gb|EEF35632.1| nucleic | 780 | 013590 (2) | ref|XP_009618285.1| | 2e-57 | PREDICTED: zinc finger CCCH domain-containing protein 30 [Nicotiana tomentosifo |
| JMFS015B06 | Sequence | 492 | 012805 (6) | ref|XP_002526718.1| | 1e-09 | nucleic acid binding protein, putative [Ricinus communis] gb|EEF35632.1| nucleic | |||||
| JMFS044B03 | Sequence | 626 | 012805 (6) | ref|XP_002526718.1| | 5e-21 | nucleic acid binding protein, putative [Ricinus communis] gb|EEF35632.1| nucleic | |||||
| JMFS068E05 | Sequence | 614 | 012805 (6) | ref|XP_002526718.1| | 2e-35 | nucleic acid binding protein, putative [Ricinus communis] gb|EEF35632.1| nucleic | |||||
| JMFS088C01 | Sequence | 615 | 012805 (6) | gb|KDO45407.1| | 1e-17 | hypothetical protein CISIN_1g006944mg [Citrus sinensis] gb|KDO45408.1| hypotheti | |||||
This contig is upended
. : . : . : . : . : . :
JMFF013P24+ AA
____________________________________________________________
consensus AA
. : . : . : . : . : . :
JMFF013P24+ AGAAAGGATCAGTTTTAGAACATCAATGCTGCCATAAGTTGCAGCAACCATCAAAGGCGT
JMFS068E05+ AAGGATCAGTTTTAGAACATCAATGCTGCCATAAGTTGCAGCAACCATCAAAGGCGT
____________________________________________________________
consensus AGAAAGGATCAGTTTTAGAACATCAATGCTGCCATAAGTTGCAGCAACCATCAAAGGCGT
. : . : . : . : . : . :
JMFF013P24+ TCTATGCTCAAGAACCATTTGCTTCGAGCCCTTTTGCCGCCCATACCACTGTCCAACTTC
JMFS015B06+ C
JMFS068E05+ TCTATGCTCAAGAACCATTTGCTTCGAGCCCTTTTGCCGCCCATACCACTGTCCAACTTC
JMFS044B03+ ATGCTCAAGAACCATTNGCTTCGAGCCCTTNTGCCGCCCATACCACTGTCCAACTTC
JMFS088C01+ TTCGAGCCCTTNTGCCGCCCATACCACTGTCCAACTTC
____________________________________________________________
consensus TCTATGCTCAAGAACCATTTGCTTCGAGCCCTTTTGCCGCCCATACCACTGTCCAACTTC
. : . : . : . : . : . :
JMFF013P24+ ATCAATACTAGACGGATCACTGCCAATCCATCTCTTAACGCCTTCTATGTCATTGTTGGC
JMFS015B06+ ATCAATACTAGACGGATCACTGCCAATCCATCTATTAACGCCTTCTATGTCATTGTTGGC
JMFS068E05+ ATCAATACTAGACGGATCACTGCCAATCCATCTCTTAACGCCTTCTATGTCATTGTTGGC
JMFS044B03+ ATCAATACTAGACGGATCACTGCCAATCCATCTCTTAACGCCTTCTATGTCATTGTTGGC
JMFS088C01+ ATCAATACTAGACGGATCACTGCCAATCCATCTCTTAACGCCTTCTATGTCATTGTTGGC
____________________________________________________________
consensus ATCAATACTAGACGGATCACTGCCAATCCATCTCTTAACGCCTTCTATGTCATTGTTGGC
. : . : . : . : . : . :
JMFF013P24+ AGCAAGTTCAAGCAAACTCGAAAAAGTATCCTCAGTTTCGACTGTCAAATGATTTATGTT
JMFS015B06+ AGCAAGTTCAAGCAAACTCGAAAAAGTATCCTCAGTTTCGACTGTCAAATGATTTATGTT
JMFS068E05+ AGCAAGTTCAAGCAAACTCGAAAAAGTATCCTCAGTTTCGACTGTCAAATGATTTATGTT
JMFS044B03+ AGCAAGTTCAAGCAAACTCGAAAAAGTATCCTCAGTTTCGACTGTCAAATGATTTATGTT
JMFS088C01+ AGCAAGTTCAAGCAAACTCGAAAAAGTATCCTCAGTTTCGACTGTCAAATGATTTATGTT
____________________________________________________________
consensus AGCAAGTTCAAGCAAACTCGAAAAAGTATCCTCAGTTTCGACTGTCAAATGATTTATGTT
. : . : . : . : . : . :
JMFF013P24+ CATGATTGTGGCTAAACTATTATCAACTGTGATTCATATAACCTGGTTTCCAACAACTCT
JMFS015B06+ CATGATTGTGGCTAAACTATTATCAACGGTGATTCATATAACCTGGTTTCCAACAACTCT
JMFS068E05+ CATGATTGTGGCTAAACTATTATCAACGGTGATTCATATAACCTGGTTTCCAACAACTCT
JMFS044B03+ CATGATTGTGGCTAAACTATTATCAACGGTGATTCATATAACCTGGTTTCCAACAACTCT
JMFS088C01+ CATGATTGTGGCTAAACTATTATCAACGGTGATTCATATAACCTGGTTTCCAACAACTCT
JMFF001C13+ CAACGGTGATTCATATAACCTGGTTTCCAACAACTCT
____________________________________________________________
consensus CATGATTGTGGCTAAACTATTATCAACGGTGATTCATATAACCTGGTTTCCAACAACTCT
. : . : . : . : . : . :
JMFF013P24+ AATCGATAGCACATACTTTCATCTCACGATCCAACATTTGTTTGTCTCCCCAGATTATAT
JMFS015B06+ AATCGATAGCACATACTTTCATCTCACGATCCAACATTTGTTTGTCTCCCCAGATTATAT
JMFS068E05+ AATCGATAGCACATACTTTCATCTCACGATCCAACATTTGTTTGTCTCCCCAGATTATAT
JMFS044B03+ AATCGATAGCACATACTTTCATCTCACGATCCAACATTTGTTTGTCTCCCCAGATTATAT
JMFS088C01+ AATCGATAGCACATACTTTCATCTCACGATCCAACATTTGTTTGTCTCCCCAGATTATAT
JMFF001C13+ AATCGATAGCACATACTTTCATCTCACGATCCAACATTTGTTTGTCTCCCCAGATTATAT
____________________________________________________________
consensus AATCGATAGCACATACTTTCATCTCACGATCCAACATTTGTTTGTCTCCCCAGATTATAT
. : . : . : . : . : . :
JMFF013P24+ TCCCAGCTAGTGAGAAGAAAAAGAAGAGCCCTCCAGTGGCTGCAACTCCTCCATCTCTTG
JMFS015B06+ TCCCAGCTAGTGAGAAGAAAAAGAAGAGCCCTCCAGTGGCTGCAACTCCTCCATTTCTTG
JMFS068E05+ TCCCAGCTAGTGAGAAGAAAAAGAAGAGCCCTCCAGTGGCTGCAACTCCTCCATTTCTTG
JMFS044B03+ TCCCAGCTAGTGAGAAGAAAAAGAAGAGCCCTCCAGTGGCTGCAACTCCTCCATTTCTTG
JMFS088C01+ TCCCAGCTAGTGAGAAGAAAAAGAAGAGCCCTCCAGTGGCTGCAACTCCTCCATTTCTTG
JMFF001C13+ TCCCAGCTAGTGAGAAGAAAAAGAAGAGCCCTCCAGTGGCTGCAACTCCTCCATTTCTTG
____________________________________________________________
consensus TCCCAGCTAGTGAGAAGAAAAAGAAGAGCCCTCCAGTGGCTGCAACTCCTCCATTTCTTG
. : . : . : . : . : . :
JMFF013P24+ TTCCTTTGCTCCTGTGGCTGTACCTATAGACAGAAGGGGCGGAAGTTTTGCAGATCTAGA
JMFS015B06+ TTCCTTTGCTCCTGTGGCTGTACCTATAGACAGAAGGGGCGGAAGTTTTGCAGATCTAGA
JMFS068E05+ TTCCTTTGCTCCTGTGGCTGTACCTATAGACAGAAGGGGCGGAAGTTTTGCAGATCTAGA
JMFS044B03+ TTCCTTTGCTCCTGTGGCTGTACCTATAGACAGAAGGGGCGGAAGTTTTGCAGATCTAGA
JMFS088C01+ TTCCTTTGCTCCTGTGGCTGTACCTATAGACAGAAGGGGCGGAAGTTTTGCAGATCTAGA
JMFF001C13+ TTCCTTTGCTCCTGTGGCTGTACCTATAGACAGAAGGGGCGGAAGTTTTGCAGATCTAGA
____________________________________________________________
consensus TTCCTTTGCTCCTGTGGCTGTACCTATAGACAGAAGGGGCGGAAGTTTTGCAGATCTAGA
. : . : . : . : . : . :
JMFF013P24+ GAGAGAAAGAAGAGGAGAGGAACGAGAAAGTTGTGATAACCCAAGAAGATGGAGGAGGGG
JMFS015B06+ GAGAGAAAGAAGAGGAGAGGAACGAGAAAGTTGTGATAACCCAAGAAGATGGAGGAGGGG
JMFS068E05+ GAGAGAAAGAAGAGGAGAGGAACGAGAAAGTTGTGATAACCCAAGAAGATGGAGGAGGGG
JMFS044B03+ GAGAGAAAGAAGAGGAGAGGAACGAGAAAGTTGTGATAACCCAAGAAGATGGAGGAGGGG
JMFS088C01+ GAGAGAAAGAAGAGGAGAGGAACGAGAAAGTTGTGATAACCCAAGAAGATGGAGGAGGGG
JMFF001C13+ GAGAGAAAGAAGAGGAGAGGAACGAGAAAGTTGTGATAACCCAAGAAGATGGAGGAGGGG
____________________________________________________________
consensus GAGAGAAAGAAGAGGAGAGGAACGAGAAAGTTGTGATAACCCAAGAAGATGGAGGAGGGG
. : . : . : . : . : . :
JMFF013P24+ GAGGAGGAAGAGGAGGAGCTGCTGCTGCTGCTTTTTTCTTCGCCATTTTCTAT
JMFS015B06+ GAGGAGGAAGAGGAGGAGCTGCTGCTGCTGCTTTTTTCTTCGCCATTTCCTATGCTCTCT
JMFS068E05+ GAGGAGGAAGAGGAGGAGCTGCTGCTGCTGCTTTTTTCTTCGCCATTTCCTATGCTCTCT
JMFS044B03+ GAGGAGGAAGAGGAGGAGCTGCTGCTGCTGCTTTTTTCTTCGCCATTTCCTATGCTCTCT
JMFS088C01+ GAGGAGGAAGAGGAGGAGCTGCTGCTGCTGCTTTTTTCTTCGCCATTTCCTATGCTCTCT
JMFF001C13+ GAGGAGGAAGAGGAGGAGCTGCTGCTGCTGCTTTTTTCTTCGCCATTTCCTATGCTCTCT
____________________________________________________________
consensus GAGGAGGAAGAGGAGGAGCTGCTGCTGCTGCTTTTTTCTTCGCCATTTCCTATGCTCTCT
. : . : . : . : . : . :
JMFS015B06+ CTTTCTCTCTC
JMFS068E05+ CTTTCTCTCTCCCTTCT
JMFS044B03+ CTTTCTCTCTCCCTTCTTTTCTTTTTAACTGATGAATACCACCATTATTTTTAACAATTA
JMFS088C01+ CTTTCTCTCTCCCTTCTTTTCTTTTTAACTGATGAATACCACCATTATTTTTAACAATTA
JMFF001C13+ CTTTCTCTCTCCCTTCTTTTCTTTTTAACTGATGAATACCACCATTATTTTTAACAATTA
____________________________________________________________
consensus CTTTCTCTCTCCCTTCTTTTCTTTTTAACTGATGAATACCACCATTATTTTTAACAATTA
. : . : . : . : . : . :
JMFS044B03+ TTACATTAATAATTTTAGTGCCACTACAG
JMFS088C01+ TTACATTAATAATTTTAGTGCCACTACAGACTAATTC
JMFF001C13+ TTACATTAATAATTTTAGTGCCACTACAGACTAATTCTCTTTCTCTCTCTCTCTCGTGTT
____________________________________________________________
consensus TTACATTAATAATTTTAGTGCCACTACAGACTAATTCTCTTTCTCTCTCTCTCTCGTGTT