Contig 012804:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS112C10+                                                                GAATCCA
                      ____________________________________________________________
consensus                                                                  GAATCCA
 
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JMFS112C10+           AAGACATAAGAGATGGGAATCAGACCTAAATAATCCCCATATCATAACCAGCTCACCGAG
                      ____________________________________________________________
consensus             AAGACATAAGAGATGGGAATCAGACCTAAATAATCCCCATATCATAACCAGCTCACCGAG
 
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JMFS112C10+           TCTGCCATCAAGCTCTGACGGTAAAACTTGAATTTGTACTCCATACTTACTATTCCTCTT
                      ____________________________________________________________
consensus             TCTGCCATCAAGCTCTGACGGTAAAACTTGAATTTGTACTCCATACTTACTATTCCTCTT
 
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JMFS112C10+           ATCAACAGACACCTTCACTAGGCCAGTGGTCTCGGTTCTGAAGAGATATTTTGACACTTG
JMFF037C06+                                                  GAAGAGATATTTTGACACTTG
JMFF001A17+                                                  GAAGAGATATTTTGACACTTG
                      ____________________________________________________________
consensus             ATCAACAGACACCTTCACTAGGCCAGTGGTCTCGGTTCTGAAGAGATATTTTGACACTTG
 
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JMFS112C10+           TCCAGCAGTTTGTATAACAGAAGTATCTGCTGCTGTTGCTGCCACCACCATTAGACCGTA
JMFF037C06+           TCCAGCAGTTTGTATAACAGAAGTATCTGCTGCTGTTGCTGCCACCACCATTAGACCGTA
JMFF001A17+           TCCAGCAGTTTGTATAACAGAAGTATCTGCTGCTGTTGCTGCCACCACCATTAGACCGTA
                      ____________________________________________________________
consensus             TCCAGCAGTTTGTATAACAGAAGTATCTGCTGCTGTTGCTGCCACCACCATTAGACCGTA
 
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JMFS112C10+           CGGTGTACTAGAAATTTTTTGAGTAAAATTTCCGCCATTCCAGTAGAACGGTTTCTGTAC
JMFF037C06+           CGGTGTACTAGAAATTTTTTGAGTAAAATTTCCGCCATTCCAGTAGAACGGTTTCTGTAC
JMFF001A17+           CGGTGTACTAGAAATTTTTTGAGTAAAATTTCCGCCATTCCAGTAGAACGGTTTCTGTAC
                      ____________________________________________________________
consensus             CGGTGTACTAGAAATTTTTTGAGTAAAATTTCCGCCATTCCAGTAGAACGGTTTCTGTAC
 
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JMFS112C10+           TGCATCCACATTCCTTAGACCGCATACTACTCTTTCACTATGGCAACCGCGAGCACAAGC
JMFF037C06+           TGCATCCACATTCCTTAGACCGCATACTACTCTTTCACTATGGCAACCGCGAGCACAAGC
JMFF001A17+           TGCATCCACATTCCTTAGACCGCATACTACTCTTTCACTATGGCAACCGCGAGCACAAGC
                      ____________________________________________________________
consensus             TGCATCCACATTCCTTAGACCGCATACTACTCTTTCACTATGGCAACCGCGAGCACAAGC
 
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JMFS112C10+           AACTGACTTGGATGACCCAGCAGTTCCCCGGCCAAGGTAGCATGATTGTAGCACAGATGA
JMFF037C06+           AACTGACTTGGATGACCCAGCAGTTCCCCGGCCAAGGTAGCATGATTGTAGCACAGATGA
JMFF001A17+           AACTGACTTGGATGACCCAGCAGTTCCCCGGCCAAGGTAGCATGATTGTAGCACAGATGA
                      ____________________________________________________________
consensus             AACTGACTTGGATGACCCAGCAGTTCCCCGGCCAAGGTAGCATGATTGTAGCACAGATGA
 
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JMFS112C10+           TAGTGGTAACATTGCCATTTGAATACTTAAGGAGATATTAGGACCAAGCCAAACATAGAG
JMFF037C06+           TAGTGGTAACATTGCCATTTGAATAGTTAAGGAGATATTAGGACCAAGCCAAACATAGAG
JMFF001A17+           TAGTGGTAACATTGCCATTTGAATAGTTAAGGAGATATTAGGACCAAGCCAAACATAGAG
                      ____________________________________________________________
consensus             TAGTGGTAACATTGCCATTTGAATAGTTAAGGAGATATTAGGACCAAGCCAAACATAGAG
 
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JMFS112C10+           TTTGGTCAGTCATCCGAATCTCGTCCATTAACTGAACCAAACATCAAGAATCCGCATTGA
JMFF037C06+           TTTGGTCAGTCATCCGAATCTCGTCCATTAACTGAACCAAACATCAAGAATCCGCATTGA
JMFF001A17+           TTTGGTCAGTCATCCGAATCTCGTCCATTAACTGAACCAAACATCAAGAATCCGCATTGA
                      ____________________________________________________________
consensus             TTTGGTCAGTCATCCGAATCTCGTCCATTAACTGAACCAAACATCAAGAATCCGCATTGA
 
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JMFS112C10+           ACTTCAGACTGCGCCATGAAAAGCCCTTTTATGTGTTTAAGAATTCTGGGGTGA      
JMFF037C06+           ACTTCAGACTGCGCCATGAAAAGCCCTTTTATGTGTTTAAGAATTCTGGGGTGAGCTGCT
JMFF001A17+           ACTTCAGACTGCGCCATGAAAAGCCCTTTTATGTGTTTAAGAATTCTGGGGTGAGCTGCT
                      ____________________________________________________________
consensus             ACTTCAGACTGCGCCATGAAAAGCCCTTTTATGTGTTTAAGAATTCTGGGGTGAGCTGCT
 
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JMFF037C06+           TAAAATGAGAATGATAAATAATCAAATCAAATGGCTCCAAAGTCCGATATAGAAGTGACA
JMFF001A17+           TAAAATGAGAATGATAAATAATCAAATCAAATGGCTCCAAAGTCCGATATAGAAGTGACA
                      ____________________________________________________________
consensus             TAAAATGAGAATGATAAATAATCAAATCAAATGGCTCCAAAGTCCGATATAGAAGTGACA
 
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JMFF037C06+           GGGAGAAGAGTGGAAATTGGAATGATCACGGACCGCAAACCGAGGATCCTCGAGCAC   
JMFF001A17+           GGGAGAAGAGTGGAAATTGGAATGATCACGGACCGCAAACCGAGGATCCTCGAGCACCGT
                      ____________________________________________________________
consensus             GGGAGAAGAGTGGAAATTGGAATGATCACGGACCGCAAACCGAGGATCCTCGAGCACCGT