Contig 012795:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF047C14Sequence691012795 (2)emb|CDP08983.1|1e-125unnamed protein product [Coffea canephora]802017259ref|XP_009794082.1|2e-92PREDICTED: 3-ketoacyl-CoA synthase 12-like [Nicotiana sylvestris]
JMSF053I07Sequence270010953 (2)873012795 (2)ref|XP_009804844.1|8e-81PREDICTED: 3-ketoacyl-CoA synthase 3-like, partial [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF047C14+                                      GGTGAAGCATAAAGCCATGTTCAAGCTGAAAAC
                      ____________________________________________________________
consensus                                        GGTGAAGCATAAAGCCATGTTCAAGCTGAAAAC
 
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JMSF047C14+           CCTAGTGAGAACTCACCACGGCGGGAAAGATGAGTCCTATAATTGTTGCATACAAAAGGA
                      ____________________________________________________________
consensus             CCTAGTGAGAACTCACCACGGCGGGAAAGATGAGTCCTATAATTGTTGCATACAAAAGGA
 
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JMSF047C14+           GGATGAACTCGGGAAACTCGGGTTCCACCTCGGAAAAACCCTCCCAAAAGCCGCAACCAT
                      ____________________________________________________________
consensus             GGATGAACTCGGGAAACTCGGGTTCCACCTCGGAAAAACCCTCCCAAAAGCCGCAACCAT
 
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JMSF047C14+           GGCGTTCTTCGACAACCTCAAAGAAATCGCGCCCAGAATCCTCCCCGTCCGGGAGCTTAT
                      ____________________________________________________________
consensus             GGCGTTCTTCGACAACCTCAAAGAAATCGCGCCCAGAATCCTCCCCGTCCGGGAGCTTAT
 
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JMSF047C14+           CCGCTACGCCGCCCTCTCGTTCCTCCAAAAACTCCCGACAAACTCCGGAAAACCCGGAAC
                      ____________________________________________________________
consensus             CCGCTACGCCGCCCTCTCGTTCCTCCAAAAACTCCCGACAAACTCCGGAAAACCCGGAAC
 
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JMSF047C14+           CACCTCAAAACCGGCGGCCATCAACTTCAAGACTGGAATCGATCACTTCTGCATCCACAC
rJMSF053I07+                                                     CACTTCTGCCTGCACAC
                      ____________________________________________________________
consensus             CACCTCAAAACCGGCGGCCATCAACTTCAAGACTGGAATCGATCACTTCTGCCTGCACAC
 
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JMSF047C14+           CGGCGGGAAAGCGGTGATCAACGGCATAGGGCAGAGCCTCAACCTGAGCGAATATGATTT
rJMSF053I07+          CGGCGGGAAGGCGGTGATCGACGGCATCGGGCAGAACCTGAACCTGAGCGAGTACGATCT
                      ____________________________________________________________
consensus             CGGCGGGAAGGCGGTGATCGACGGCATCGGGCAGAGCCTGAACCTGAGCGAGTATGATTT
 
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JMSF047C14+           GGAGCCGGCGAGAATGACGCTGCACAGATTCGGGAACACGTCGGCCGGCAGCCTCTGGTA
rJMSF053I07+          GGAGCCGGCGAGAATGACGCTCCACCGGTTCGGCAACACCTCCGCCAGTAGCCTCTGGTA
                      ____________________________________________________________
consensus             GGAGCCGGCGAGAATGACGCTGCACCGGTTCGGGAACACGTCGGCCGGTAGCCTCTGGTA
 
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JMSF047C14+           CGTGCTGGCCTACATGGAAGCTAAGAAGAGGCTTAAGAAAGGGGATAAGGTGTTCATGAT
rJMSF053I07+          CGTTCTGGGGTACATGGAGGCCAAGAAGCGGCTCAAGAAAGGCGACAAGGTGTTCATGAT
                      ____________________________________________________________
consensus             CGTTCTGGGGTACATGGAGGCTAAGAAGCGGCTTAAGAAAGGGGATAAGGTGTTCATGAT
 
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JMSF047C14+           TAGCTTCGGGGCGGGGTTTAAGTGCAACAGTTGTGTGTGGGAAGTGGTTCGAGATTTGG 
rJMSF053I07+          CAGCTTCGGGGCGGGGTTTAAGTGCAACAGTTGCCTGTGGGAGGTGGTTAGGGATTTGGG
                      ____________________________________________________________
consensus             TAGCTTCGGGGCGGGGTTTAAGTGCAACAGTTGTGTGTGGGAGGTGGTTCGGGATTTGGG
 
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rJMSF053I07+          AGAAGAAGAAAATGTGTGGAAAGATGACATCCATAACTACCCTCCCCAAACCCTAACCAA
                      ____________________________________________________________
consensus             AGAAGAAGAAAATGTGTGGAAAGATGACATCCATAACTACCCTCCCCAAACCCTAACCAA
 
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rJMSF053I07+          CCCTTTCTTGGACAAGTTTGGATGGCTCCAACATGAAGATCCAAACACCTTCAACATTCC
                      ____________________________________________________________
consensus             CCCTTTCTTGGACAAGTTTGGATGGCTCCAACATGAAGATCCAAACACCTTCAACATTCC
 
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rJMSF053I07+          AGATGACTACGTCATCCCATGATGTTTTTCTTCCGGTAAAAAATGCACTTTTAGTCCCTC
                      ____________________________________________________________
consensus             AGATGACTACGTCATCCCATGATGTTTTTCTTCCGGTAAAAAATGCACTTTTAGTCCCTC
 
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rJMSF053I07+          AATTTTACCCTCTTCTTAGAGATCTGAACAAATTTGATCACTACTCGAAATTATCTAAAT
                      ____________________________________________________________
consensus             AATTTTACCCTCTTCTTAGAGATCTGAACAAATTTGATCACTACTCGAAATTATCTAAAT
 
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rJMSF053I07+          TGTTGTTAATTCAACCCTTCGATATAGTACCAACTTTCAAACTCTATTAGTACACACGTG
                      ____________________________________________________________
consensus             TGTTGTTAATTCAACCCTTCGATATAGTACCAACTTTCAAACTCTATTAGTACACACGTG
 
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rJMSF053I07+          CCAGATTTGTTCGGATTATCTGGACTACTAGAGTACTAGTGAAGTTTGAGGGTAGTACTA
                      ____________________________________________________________
consensus             CCAGATTTGTTCGGATTATCTGGACTACTAGAGTACTAGTGAAGTTTGAGGGTAGTACTA
 
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rJMSF053I07+          TATGACAAGGGACTCAATTCATAATACTTTAGACAATTGATGAGAGATCAAATTTATTTA
                      ____________________________________________________________
consensus             TATGACAAGGGACTCAATTCATAATACTTTAGACAATTGATGAGAGATCAAATTTATTTA
 
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rJMSF053I07+          ATTAAATTGAAAGACTATAGTAACAATTATGTTTTTTTTTCCCTTTTTCTTCGTTAGGTT
                      ____________________________________________________________
consensus             ATTAAATTGAAAGACTATAGTAACAATTATGTTTTTTTTTCCCTTTTTCTTCGTTAGGTT