Contig 012794:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF006J12Sequence325002495 (2)407012794 (2)ref|XP_009598193.1|160PREDICTED: uncharacterized protein LOC104094037 [Nicotiana tomentosiformis]
JMSF053C03Sequence687002495 (2)ref|XP_009600395.1|142PREDICTED: uncharacterized protein LOC104095865 [Nicotiana tomentosiformis]831012794 (2)ref|XP_009795356.1|367PREDICTED: uncharacterized protein LOC104242075 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF053C03+                   CGCTTGCGGTCAAGCATCCTGGACTAGTCAAGTCCCTCACATTACTCGCCC
                      ____________________________________________________________
consensus                      CGCTTGCGGTCAAGCATCCTGGACTAGTCAAGTCCCTCACATTACTCGCCC
 
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rJMSF053C03+          CACCATATTTTCCGGCACCCAAGGGGGAACGAGCGACGCAGTACACGATGAGACAATTGG
                      ____________________________________________________________
consensus             CACCATATTTTCCGGCACCCAAGGGGGAACGAGCGACGCAGTACACGATGAGACAATTGG
 
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rJMSF053C03+          CGCCGCGACGGGTGTGGCCGCCGATCGCGTTCGGGGCGTCCGTGGCGTGTTGGTACGAGC
                      ____________________________________________________________
consensus             CGCCGCGACGGGTGTGGCCGCCGATCGCGTTCGGGGCGTCCGTGGCGTGTTGGTACGAGC
 
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rJMSF053C03+          ACGTAAGCCGGACGGTGTGCCTTCTCATCTGCAAAAACCACCGCGTCTGGGATTTTCTCA
                      ____________________________________________________________
consensus             ACGTAAGCCGGACGGTGTGCCTTCTCATCTGCAAAAACCACCGCGTCTGGGATTTTCTCA
 
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rJMSF053C03+          CCAAACTCATCACCAGAAACAGGATCAGAACGTATCTGGTGGAGGGATTTTGCTGCCACA
                      ____________________________________________________________
consensus             CCAAACTCATCACCAGAAACAGGATCAGAACGTATCTGGTGGAGGGATTTTGCTGCCACA
 
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rJMSF006J12+                      CATGGCATACCGTACACAACATTATTTTTGGGACGGCCTGCAAAATGG
rJMSF053C03+          CGCACAACGCCGCATGGCATACCCTACACAACATTATTTTTGGGACGGCCTGCAAAATGG
                      ____________________________________________________________
consensus             CGCACAACGCCGCATGGCATACCGTACACAACATTATTTTTGGGACGGCCTGCAAAATGG
 
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rJMSF006J12+          AAGGATATTTGGAGGTAGTGAAGANCCGGCTGAAGTGTGAGGTGACGGTTATTCATGGGC
rJMSF053C03+          AAGGATATTTGGAGGTAGTGAAGAACCGGCTGAAGTGTGAGGTGACGGTTATTCATGGGC
                      ____________________________________________________________
consensus             AAGGATATTTGGAGGTAGTGAAGAACCGGCTGAAGTGTGAGGTGACGGTTATTCATGGGC
 
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rJMSF006J12+          GAGACGACGAGCTCATCCCGGTGGAGTGCAGCTACAACGTGCAGTCAAGAATCCCCCGGG
rJMSF053C03+          GAGACGACGAGCTCATCCCGGTGGAGTGCAGCTACAACGTGCAGTCAAGAATCCCCCGGG
                      ____________________________________________________________
consensus             GAGACGACGAGCTCATCCCGGTGGAGTGCAGCTACAACGTGCAGTCAAGAATCCCCCGGG
 
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rJMSF006J12+          CGCACGTTAAGGTGGTGGAGGACAAAGATCACATCACCATTGTTGTTGGGAGGCAGGAGG
rJMSF053C03+          CGCACGTTAAGGTGGTGGAGGACAAAGATCACATCACCATTGTTGTTGGGAGGCAGGAGG
                      ____________________________________________________________
consensus             CGCACGTTAAGGTGGTGGAGGACAAAGATCACATCACCATTGTTGTTGGGAGGCAGGAGG
 
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rJMSF006J12+          CTTTTGCTAGGGAGCTTGAACAAATTTGGAGAAACTCAAGCAGTTCAACTACCTAGGTCT
rJMSF053C03+          CTTTTGCTAGGGAGCTTGAACAAATTTGGAGAAACTCAAGCAGTTCAACTACCTAGGTCT
                      ____________________________________________________________
consensus             CTTTTGCTAGGGAGCTTGAACAAATTTGGAGAAACTCAAGCAGTTCAACTACCTAGGTCT
 
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rJMSF006J12+          GATGATCCAAAACAAGTAAACAACCACCCTACATAAATTATTATCTTGTGTCCGGTTTAA
rJMSF053C03+          GATGATCCAAAACAAGTAAACAACCACCCTACATAAATTATTATCTTGTGTCCGGTTTAA
                      ____________________________________________________________
consensus             GATGATCCAAAACAAGTAAACAACCACCCTACATAAATTATTATCTTGTGTCCGGTTTAA
 
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rJMSF006J12+          GGAAATTGGACCGAGAAATTCTGATGTCCATAAGGAAATTAGGAGTTGATCT        
rJMSF053C03+          GGAAATTGGACCGAGAAATTCTGATGTCCATAAGGAAATTAGGAGTTGATCTTGCTTGAG
                      ____________________________________________________________
consensus             GGAAATTGGACCGAGAAATTCTGATGTCCATAAGGAAATTAGGAGTTGATCTTGCTTGAG
 
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rJMSF053C03+          TGGGCAAGTTATAATATATAGTACTCCCTACATATATTGCTAAATGTGTAACCGGGTTGG
                      ____________________________________________________________
consensus             TGGGCAAGTTATAATATATAGTACTCCCTACATATATTGCTAAATGTGTAACCGGGTTGG
 
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rJMSF053C03+          GATGTCAAGTATTTCTATTTAATTATATAAAGTATTATTTTGTCAAAAAAATATAAAGTA
                      ____________________________________________________________
consensus             GATGTCAAGTATTTCTATTTAATTATATAAAGTATTATTTTGTCAAAAAAATATAAAGTA