| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011N12 | Sequence | 581 | 007736 (7) | ref|XP_006345366.1| | 3e-27 | PREDICTED: cell division control protein 48 homolog C-like [Solanum tuberosum] | 785 | 012793 (4) | ref|XP_007020346.1| | 1e-56 | Cell division control protein 48 C isoform 2 [Theobroma cacao] gb|EOY11871.1| Ce |
| JMSF002I24 | Sequence | 287 | 007736 (7) | ref|XP_006345366.1| | 2e-11 | PREDICTED: cell division control protein 48 homolog C-like [Solanum tuberosum] | 676 | 012793 (4) | ref|XP_011083573.1| | 5e-21 | PREDICTED: cell division control protein 48 homolog C-like [Sesamum indicum] |
| JMSF040G06 | Sequence | 600 | 007736 (7) | ref|XP_006345366.1| | 6e-27 | PREDICTED: cell division control protein 48 homolog C-like [Solanum tuberosum] | 908 | 012793 (4) | ref|XP_011084336.1| | 5e-64 | PREDICTED: cell division control protein 48 homolog C-like [Sesamum indicum] |
| JMSF053A03 | Sequence | 664 | 007736 (7) | ref|XP_006345366.1| | 8e-27 | PREDICTED: cell division control protein 48 homolog C-like [Solanum tuberosum] | 916 | 012793 (4) | ref|XP_011084336.1| | 2e-51 | PREDICTED: cell division control protein 48 homolog C-like [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF040G06+ TGCGAGGACATGTTCACCATGCATAATTTCTTTGATGAG
____________________________________________________________
consensus TGCGAGGACATGTTCACCATGCATAATTTCTTTGATGAG
. : . : . : . : . : . :
rJMSF040G06+ GTGGATGCTTTGACAACAGAGCGTAATAAAGAAGGGAGCTATGTTATAGAGCGGATGTTG
rJMSF053A03+ TATAGAGCGGATGTTG
____________________________________________________________
consensus GTGGATGCTTTGACAACAGAGCGTAATAAAGAAGGGAGCTATGTTATAGAGCGGATGTTG
. : . : . : . : . : . :
rJMFF011N12+ TTGCTGATAGAATTAGATGGTGCAGANCAACGCAAGGACGTTTATGTTATTGGA
rJMSF040G06+ AACCAGTTGCTGATAGAATTAGATGGTGCAGAACAACGCAAGGACGTTTATGTTATTGGA
rJMSF053A03+ ANCCAGTTGCTGATAGAATTAGATGGTGCAGAACAACGCAAGGACGTTTATGTTATTGGA
____________________________________________________________
consensus AACCAGTTGCTGATAGAATTAGATGGTGCAGAACAACGCAAGGACGTTTATGTTATTGGA
. : . : . : . : . : . :
rJMFF011N12+ GCAACAAATAGGCCAGAAGCAATGGACAGGGCTCTGTTACGACCTGGAAGGTTTGGAAAG
rJMSF040G06+ GCAACAAATAGGCCAGAAGCAATGGACAGGGCTCTGTTACGACCTGGAAGGTTTGGAAAG
rJMSF053A03+ GCAACAAATAGGCCAGAAGCAATGGACAGGGCTCTGTTACGACCTGGAAGGTTTGGAAAG
____________________________________________________________
consensus GCAACAAATAGGCCAGAAGCAATGGACAGGGCTCTGTTACGACCTGGAAGGTTTGGAAAG
. : . : . : . : . : . :
rJMFF011N12+ CTCCTCTATGTCCCACTACCTAGTCCAGATGAACGTGGGCTTATCTTAAAAGCTCTTGCA
rJMSF040G06+ CTCCTCTATGTCCCACTACCTAGTCCAGATGAACGTGGGCTTATCTTAAAAGCTCTTGCA
rJMSF002I24+ ACTACCTAGTCCAGATGAACGTGGGCTTATCTTAAAAGCTCTTGCA
rJMSF053A03+ CTCCTCTATGTCCCACTACCTAGTCCAGATGAACGTGGGCTTATCTTAAAAGCTCTTGCA
____________________________________________________________
consensus CTCCTCTATGTCCCACTACCTAGTCCAGATGAACGTGGGCTTATCTTAAAAGCTCTTGCA
. : . : . : . : . : . :
rJMFF011N12+ AGAAAAAAATCTATAGATCCCAGCGTAGACTTAGCAGCCTTAGGAAGACATGACTCTTGT
rJMSF040G06+ AGAAAAAAATCTATAGATCCCAGCGTAGACTTAGCAGCCTTAGGAAGACATGACTCTTGT
rJMSF002I24+ AGAAAAAAATCTATAGATCCCAGCATAGACTTAGCAGCCTTAGGAAGACATGACTCTTGT
rJMSF053A03+ AGAAAAAAATCTATAGATCCCAGCGTAGACTTAGCAGCCTTAGGAAGACATGACTCTTGT
____________________________________________________________
consensus AGAAAAAAATCTATAGATCCCAGCGTAGACTTAGCAGCCTTAGGAAGACATGACTCTTGT
. : . : . : . : . : . :
rJMFF011N12+ AAAAATCTAAGTGGAGCTGACCTCTCAGCACTGATGCTTGAAGCTGCTATG---GCTGTT
rJMSF040G06+ AAAAATCTAAGTGGAGCTGACCTCTCAGCACTGATGCTTGAAGCTGCTATGGCCGCTGTT
rJMSF002I24+ AAAAATCTAAGTGGAGCTGACCTCTCAGCACTGATGCTTGAAGCTGCTATGGCCGCTGTT
rJMSF053A03+ AAAAATCTAAGTGGAGCTGACCTCTCAGCACTGATGCTTGAAGCTGCTATGGCCGCTGTT
____________________________________________________________
consensus AAAAATCTAAGTGGAGCTGACCTCTCAGCACTGATGCTTGAAGCTGCTATGGCCGCTGTT
. : . : . : . : . : . :
rJMFF011N12+ GATGAGAAGTTGGAATCATCGTCATCAAATATGAGCGTATATGGCGTATCAACTACCATT
rJMSF040G06+ GATGAGAAGTTGGAATCATCGTCATCAAATATGAGCGTATATGGCGTATCAACTACCATT
rJMSF002I24+ GATGAGAAGTTGGAATCATCGTCATCAAATATGAGCGTATATGGCGTATCAACTACCATT
rJMSF053A03+ GATGAGAAGTTGGAATCATCGTCATCAAATATGAGCGTATATGGCGTATCAACTACCATT
____________________________________________________________
consensus GATGAGAAGTTGGAATCATCGTCATCAAATATGAGCGTATATGGCGTATCAACTACCATT
. : . : . : . : . : . :
rJMFF011N12+ AAAGATGTGCATTTCGAATTGGCTCGGAAAAAAATTACTCCCTCGGTTTCTGTGGAGCAA
rJMSF040G06+ AAAGATGTGCATTTCGAATTGGCTCGGAAAAAAATTACTCCCTCGGTTTCTGTGGAGCAA
rJMSF002I24+ AAAGATGTGCATTTCGAATTGGCTCGGAAAAAAATTACTCCCTCGGTTTCTGTGGAGCAA
rJMSF053A03+ AAAGATGTGCATTTCGAATTGGCTCGGAAAAAAATTACTCCCTCGGTTTCTGTGGAGCAA
____________________________________________________________
consensus AAAGATGTGCATTTCGAATTGGCTCGGAAAAAAATTACTCCCTCGGTTTCTGTGGAGCAA
. : . : . : . : . : . :
rJMFF011N12+ ATAGAATATTACAGAGTTTTGTCTCAAAACTTCAAAGCAGCATGAGAACAGACCTATATG
rJMSF040G06+ ATAGAATATTACAGAGTTTTGTCTCAAAACTTCAAAGCAGCATGAGAACAGACCTATATG
rJMSF002I24+ ATAGAATATTACAGAGTTTTGTCTCAAAACTTCAAAGCAGCATGAGAACAGACCTATATG
rJMSF053A03+ ATAGAATATTACAGAGTTTTGTCTCAAAACTTCAAAGCAGCATGAGAACAGACCTATATG
____________________________________________________________
consensus ATAGAATATTACAGAGTTTTGTCTCAAAACTTCAAAGCAGCATGAGAACAGACCTATATG
. : . : . : . : . : . :
rJMFF011N12+ GTATGGATTTACACTTTGGAACTAAAGACTCGTTCTTGAGAATGAGTCGATATATCCCTC
rJMSF040G06+ GTATGGATTTACACTTTGGAACTAAAGACTCGTTCTTGAGAATGAGTCGATATATCCCTC
rJMSF002I24+ GTATGGATTTACACTTTGGAACTAAAGACTCGTTCTTGAGAATGAGTCGATATATCCCTC
rJMSF053A03+ GTATGGATTTACACTTTGGAACTAAAGACTCGTTCTTGAGAATGAGTCGATATATCCCTC
____________________________________________________________
consensus GTATGGATTTACACTTTGGAACTAAAGACTCGTTCTTGAGAATGAGTCGATATATCCCTC
. : . : . : . : . : . :
rJMFF011N12+ TCGTCTAGTCATCTGGTTGTTTCATACACCCAAATGCTTTTTGGCCTTTAATAGATGTAC
rJMSF040G06+ TCGTCTAGTCATCTGGTTGTTTCATACACCCAAATGCTTTTTGGCCTTTAATAGATGTAC
rJMSF002I24+ TCGTCTAGTCATCTGGTTGTTTCATACACCCAAATGCTTTTTGGCCTTTAATAGATGTAC
rJMSF053A03+ TCGTCTAGTCATCTGGTTGTTTCATACACCCAAATGCTTTTTGGCCTTTAATAGATGTAC
____________________________________________________________
consensus TCGTCTAGTCATCTGGTTGTTTCATACACCCAAATGCTTTTTGGCCTTTAATAGATGTAC
. : . : . : . : . : . :
rJMFF011N12+ AGATTATGATGCTACTGGTGTCCGGGACGAGAGAAATTTTGCAAATCTGGAGATTAATTT
rJMSF040G06+ AGATTATGATGCTACTGGTGTCCGGGACGAGAGAAATTTTGCAAATCTGGAGATTAATTT
rJMSF002I24+ AGATTATGATGCTACTGGTGTCCGGGACGAGAGAAATTTTGCAAATCTGGAGATTAATTT
rJMSF053A03+ AGATTATGATGCTACTGGTGTCCGGGACGAGAGAAATTTTGCAAATCTGGAGATTAATTT
____________________________________________________________
consensus AGATTATGATGCTACTGGTGTCCGGGACGAGAGAAATTTTGCAAATCTGGAGATTAATTT
. : . : . : . : . : . :
rJMFF011N12+ TGTAGGCTCTTTTTAATGTTTATACCCCATCTGTGATGGGGAAGTTTTGAAGCTCCTAGG
rJMSF040G06+ TGTAGGCTCTTTTTAATGTTTATACCCCATCTGTGATGGGGAAGTTTTGAAGCTCCTAGG
rJMSF002I24+ TGTAGGCTCTTTTTAATGTTTATACCCCATCTGTGATGGGGAAGTTTTGAAGCTCCTAGG
rJMSF053A03+ TGTAGGCTCTTTTTAATGTTTATACCCCATCTGTGATGGGGAAGTTTTGAAGCTCCTAGG
____________________________________________________________
consensus TGTAGGCTCTTTTTAATGTTTATACCCCATCTGTGATGGGGAAGTTTTGAAGCTCCTAGG
. : . : . : . : . : . :
rJMFF011N12+ GACTATATTCGGTTGAAGTTATTTTAAAAATGTTTGCTGTTATATGTACACTATTAAT
rJMSF040G06+ GACTATATTCGGTTGAAGTTATTTTAAAAATGTTTGCTGTTATATGTACACTATTAATTG
rJMSF002I24+ GACTATATTCGGTTGAAGTTATTTTAAAAATGTTTGCTGTTATATGTACACTATTAATTG
rJMSF053A03+ GACTATATTCGGTTGAAGTTATTTTAAAAATGTTTGCTGTTATATGTACACTATTAATTG
____________________________________________________________
consensus GACTATATTCGGTTGAAGTTATTTTAAAAATGTTTGCTGTTATATGTACACTATTAATTG
. : . : . : . : . : . :
rJMSF040G06+ TTTTGTAAAAGGAAGATT
rJMSF002I24+ TTTTGTAAAAGGAAGATT
rJMSF053A03+ TTTTGTAAAAGGAAGATTTGGAATGGAAAAAGAAAAGAAGTTAGGTTTGTGCTTGGACAG
____________________________________________________________
consensus TTTTGTAAAAGGAAGATTTGGAATGGAAAAAGAAAAGAAGTTAGGTTTGTGCTTGGACAG
. : . : . : . : . : . :
rJMSF053A03+ TTTTGACTTTTGAGATTTAAGTTTAATTTGTCAGATTGGGAAATTTTATGGTTTGTGAAT
____________________________________________________________
consensus TTTTGACTTTTGAGATTTAAGTTTAATTTGTCAGATTGGGAAATTTTATGGTTTGTGAAT