Contig 012790:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016E06Sequence569006454 (10)ref|XP_009610540.1|7e-74PREDICTED: methyltransferase-like protein 10 [Nicotiana tomentosiformis]768012790 (4)ref|XP_009761503.1|6e-76PREDICTED: methyltransferase-like protein 10 [Nicotiana sylvestris]
JMSF014O21Sequence317006454 (10)ref|XP_009610540.1|9e-28PREDICTED: methyltransferase-like protein 10 [Nicotiana tomentosiformis]771012790 (4)ref|XP_009761503.1|2e-79PREDICTED: methyltransferase-like protein 10 [Nicotiana sylvestris]
JMSF014O22Sequence295006454 (10)ref|XP_009610540.1|3e-27PREDICTED: methyltransferase-like protein 10 [Nicotiana tomentosiformis]771012790 (4)ref|XP_009761503.1|2e-80PREDICTED: methyltransferase-like protein 10 [Nicotiana sylvestris]
JMSF052G10Sequence628006454 (10)ref|XP_009610540.1|5e-85PREDICTED: methyltransferase-like protein 10 [Nicotiana tomentosiformis]954012790 (4)ref|XP_009761503.1|2e-77PREDICTED: methyltransferase-like protein 10 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF014O21+                                         CAAATCACATA-GGGGATACCAATTCAAT
rJMSF014O22+                                      TACCAAATCACATA-GGGGATACCAATTCAAT
rJMSF052G10+                ATTGATATTGCCCTAGGTCACTTACCAAATCACATAGGGGGATACCAATTCAAT
                      ____________________________________________________________
consensus                   ATTGATATTGCCCTAGGTCACTTACCAAATCACATA-GGGGATACCAATTCAAT
 
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rJMFF016E06+                    CATCTTGAAAAAGACTTGTCTAAATGGAGTGTGCTTGACATTGGGACTGG
rJMSF014O21+          TCCTGCCGGGCATCTTGAAAAAGACTTGTCTAAATGGAGTGTGCTTGACATTGGGACTGG
rJMSF014O22+          TCCTGCCGGGCATCTTGAAAAAGACTTGTCTAAATGGAGTGTGCTTGACATTGGGACTGG
rJMSF052G10+          TCCTGCCGGGCATCTTGAAGAAGACTTGTCTAAATGGAGTGTGCTTGACATTGGGACTGG
                      ____________________________________________________________
consensus             TCCTGCCGGGCATCTTGAAAAAGACTTGTCTAAATGGAGTGTGCTTGACATTGGGACTGG
 
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rJMFF016E06+          CAATGGCTTGCTTCTTCAAGAGCTTGCTAAACAGGGGTTCTCTGATCTCACTGGAACTGA
rJMSF014O21+          CAATGGCTTGCTTCTTCAAGAGCTTGCTAAACAGGGGTTCTCTGATCTCACTGGAACTGA
rJMSF014O22+          CAATGGCTTGCTTCTTCAAGAGCTTGCTAAACAGGGGTTCTCTGATCTCACTGGAACTGA
rJMSF052G10+          CAATGGCTTGCTTCTTCAAGAGCTTGCTAAACAGGGGTTCTCTGATCTCACTGGAACTGA
                      ____________________________________________________________
consensus             CAATGGCTTGCTTCTTCAAGAGCTTGCTAAACAGGGGTTCTCTGATCTCACTGGAACTGA
 
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rJMFF016E06+          CTATAGTGAAGGAGCAGTTGACCTTGCTCGAAATCTTGCTGATCGTGATGGTTTCCCTGA
rJMSF014O21+          CTATAGTGAAGGAGCAGTTGACCTTGCTCGAAATCTTGCTGATCGTGATGGTTTCCCTGA
rJMSF014O22+          CTATAGTGAAGGAGCAGTTGACCTTGCTCGAAATCTTGCTGATCGTGATGGTTTCCCTGA
rJMSF052G10+          CTATAGTGAAGGAGCAGTTGACCTTGCTCGAAATCTTGCTGATCGTGATGGTTTCCCTGA
                      ____________________________________________________________
consensus             CTATAGTGAAGGAGCAGTTGACCTTGCTCGAAATCTTGCTGATCGTGATGGTTTCCCTGA
 
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rJMFF016E06+          TATCAAATTCTTGGTCGATGACATTCTTGAAACAAAGTTAGATAGGAAGTTTCAGCTTGT
rJMSF014O21+          TATCAAATTCTTGGTCGATGACATTCTTGAAACAAAGTTAGATAGGAAGTTTCAGCTTGT
rJMSF014O22+          TATCAAATTCTTGGTCGATGACATTCTTGAAACAAAGTTAGATAGGAAGTTTCAGCTTGT
rJMSF052G10+          TATCAAATTCTTGGTCGATGACATTCTTGAAACAAAGTTAGATAGGAAGTTTCAGCTTGT
                      ____________________________________________________________
consensus             TATCAAATTCTTGGTCGATGACATTCTTGAAACAAAGTTAGATAGGAAGTTTCAGCTTGT
 
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rJMFF016E06+          TATGGATAAAGGTACCTTAGATGCCATTGGATTGCATCCTGATGGTCCTATCAAAAGGTG
rJMSF014O21+          TATGGATAAAGGTACCTTAGATGCCATTGGATTGCATCCTGATGGTCCTATCAAAAGGTG
rJMSF014O22+          TATGGATAAAGGTACCTTAGATGCCATTGGATTGCATCCTGATGGTCCTATCAAAAGGTG
rJMSF052G10+          TATGGATAAAGGTACCTTAGATGCCATTGGATTGCATCCTGATGGTCCTATCAAAAGGTG
                      ____________________________________________________________
consensus             TATGGATAAAGGTACCTTAGATGCCATTGGATTGCATCCTGATGGTCCTATCAAAAGGTG
 
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rJMFF016E06+          AAGTTCCACCATATAAGACTTGTGCATCTTTGTTTAGTCGTAACCATTTGATTTTCGTGA
rJMSF014O21+          AAGTTCCACCATATAAGACTTGTGCATCTTTGTTTAGTCGTAACCATTTGATTTTCGTGA
rJMSF014O22+          AAGTTCCACCATATAAGACTTGTGCATCTTTGTTTAGTCGTAACCATTTGATTTTCGTGA
rJMSF052G10+          AAGTTCCACCATATAAGACTTGTGCATCTTTGTTTAGTCGTAACCATTTGATTTTCGTGA
                      ____________________________________________________________
consensus             AAGTTCCACCATATAAGACTTGTGCATCTTTGTTTAGTCGTAACCATTTGATTTTCGTGA
 
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rJMFF016E06+          AATGCTTCATTTGTTTTTCCAGGATCATGTACTGGGACTCCATCTCAAAACTTGTAGCTC
rJMSF014O21+          AATGCTTCATTTGTTTTTCCAGGATCATGTACTGGGACTCCATCTCAAAACTTGTAGCTC
rJMSF014O22+          AATGCTTCATTTGTTTTTCCAGGATCATGTACTGGGACTCCATCTCAAAACTTGTAGCTC
rJMSF052G10+          AATGCTTCATTTGTTTTTCCAGGATCATGTACTGGGACTCCATCTCAAAACTTGTAGCTC
                      ____________________________________________________________
consensus             AATGCTTCATTTGTTTTTCCAGGATCATGTACTGGGACTCCATCTCAAAACTTGTAGCTC
 
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rJMFF016E06+          CTGGTGGGTTATTGGTCATTACATCGTGCAACAGTACGAAGGACGAATTGGTAGAAGAAG
rJMSF014O21+          CTGGTGGGTTATTGGTCATTACATCGTGCAACAGTACGAAGGACGAATTGGTAGAAGAAG
rJMSF014O22+          CTGGTGGGTTATTGGTCATTACATCGTGCAACAGTACGAAGGACGAATTGGTAGAAGAAG
rJMSF052G10+          CTGGTGGGTTATTGGTCATTACATCGTGCAACAGTACGAAGGACGAATTGGTAGAAGAAG
                      ____________________________________________________________
consensus             CTGGTGGGTTATTGGTCATTACATCGTGCAACAGTACGAAGGACGAATTGGTAGAAGAAG
 
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rJMFF016E06+          TGTCTGCTTTCAACCTCAACCAAAGAAGAAACCCTGGTAGTCAAGAATCGGAGGGGACTC
rJMSF014O21+          TGTCTGCTTTCAACCTCAACCAAAGAAGAAACCCTGGTAGTCAAGAATCGGAGGGGACTC
rJMSF014O22+          TGTCTGCTTTCAACCTCAACCAAAGAAGAAACCCTGGTAGTCAAGAATCGGAGGGGACTC
rJMSF052G10+          TGTCTGCTTTCAACCTCAACCAAAGAAGAAACCCTGGTAGTCAAGAATCGGAGGGGACTC
                      ____________________________________________________________
consensus             TGTCTGCTTTCAACCTCAACCAAAGAAGAAACCCTGGTAGTCAAGAATCGGAGGGGACTC
 
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rJMFF016E06+          AAGAGCAGGAAACCCCCAGAGATCCTCCTCCATTCCGATACCTTGATCATGTTCGATCCT
rJMSF014O21+          AAGAGCAGGAAACCCCCAGAGATCCTCCTCCATTCCGATACCTTGATCATGTTCGATCCT
rJMSF014O22+          AAGAGCAGGAAACCCCCAGAGATCCTCCTCCATTCCGATACCTTGATCATGTTCGATCCT
rJMSF052G10+          AAGAGCAGGAAACCCCCAGAGATCCTCCTCCATTCCGATACCTTGATCATGTTCGATCCT
                      ____________________________________________________________
consensus             AAGAGCAGGAAACCCCCAGAGATCCTCCTCCATTCCGATACCTTGATCATGTTCGATCCT
 
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rJMFF016E06+          ATCCAACATTCATGTTTGGAGGATCCGTAGGATCCCGGGTTGCCACAGTCGGCTTCCTAA
rJMSF014O21+          ATCCAACATTCATGTTTGGAGGATCCGTAGGATCCCGGGTTGCCACAGTCGGCTTCCTAA
rJMSF014O22+          ATCCAACATTCATGTTTGGAGGATCCGTAGGATCCCGGGTTGCCACAGTCGGCTTCCTAA
rJMSF052G10+          ATCCAACATTCATGTTTGGAGGATCCGTAGGATCCCGGGTTGCCACAGTCGGCTTCCTAA
                      ____________________________________________________________
consensus             ATCCAACATTCATGTTTGGAGGATCCGTAGGATCCCGGGTTGCCACAGTCGGCTTCCTAA
 
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rJMFF016E06+          GGATCTGAATCAATAAAACTTTTTATGTATTCGAGTGAACGTGACTTCTGGTTCTAAGCT
rJMSF014O21+          GGATCTGAATCAATAAAACTTTTTATGTATTCGAGTGAACGTGACTTCTGGTTCTAAGCT
rJMSF014O22+          GGATCTGAATCAATAAAACTTTTTATGTATTCGAGTGAACGTGACTTCTGGTTCTAAGCT
rJMSF052G10+          GGATCTGAATCAATAAAACTTTTTATGTATTCGAGTGAACGTGACTTCTGGTTCTAAGCT
                      ____________________________________________________________
consensus             GGATCTGAATCAATAAAACTTTTTATGTATTCGAGTGAACGTGACTTCTGGTTCTAAGCT
 
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rJMFF016E06+          TTTTATGTATGGCCGAATGTTACTGTTCAGTATTCTATCTTTCAAAAATTAC        
rJMSF014O21+          TTTTATGTATGGCCGAATGTTAC                                     
rJMSF014O22+          TTTTATGTATGGCCGAATGT                                        
rJMSF052G10+          TTTTATGTATGGCCGAATGTTACTGTTCAGTATTCTATCTTTCAAAAATTACAGGAATTT
                      ____________________________________________________________
consensus             TTTTATGTATGGCCGAATGTTACTGTTCAGTATTCTATCTTTCAAAAATTACAGGAATTT
 
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rJMSF052G10+          ATTGGATGCCATCCAGAAGTTCCCTCATTTATGAACGGGGAGTATTTAGTCATGTTATGC
                      ____________________________________________________________
consensus             ATTGGATGCCATCCAGAAGTTCCCTCATTTATGAACGGGGAGTATTTAGTCATGTTATGC
 
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rJMSF052G10+          TTATTATGTTGCAAAATGCTGGGGATTTTTGTTTTCTTTTTGTTCTCTCCTCAACACCCT
                      ____________________________________________________________
consensus             TTATTATGTTGCAAAATGCTGGGGATTTTTGTTTTCTTTTTGTTCTCTCCTCAACACCCT