Contig 012787:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002C14Sequence328012787 (12)708012787 (12)dbj|BAI47577.1|9e-147lycopene beta cyclase [Ipomoea sp. Kenyan]
JMSF020L18Sequence703012787 (12)dbj|BAI47577.1|3e-86lycopene beta cyclase [Ipomoea sp. Kenyan]782012787 (12)dbj|BAI47577.1|2e-169lycopene beta cyclase [Ipomoea sp. Kenyan]
JMSF031G06Sequence684012787 (12)dbj|BAI47577.1|7e-79lycopene beta cyclase [Ipomoea sp. Kenyan]746012787 (12)dbj|BAI47577.1|6e-158lycopene beta cyclase [Ipomoea sp. Kenyan]
JMSF035C01Sequence658012787 (12)dbj|BAI47577.1|4e-62lycopene beta cyclase [Ipomoea sp. Kenyan]731012787 (12)dbj|BAI47577.1|3e-143lycopene beta cyclase [Ipomoea sp. Kenyan]
JMSF043H20Sequence743012787 (12)dbj|BAI47577.1|5e-86lycopene beta cyclase [Ipomoea sp. Kenyan]658012787 (12)dbj|BAI47577.1|2e-133lycopene beta cyclase [Ipomoea sp. Kenyan]
JMSF051L14Sequence667012787 (12)dbj|BAI47577.1|1e-139lycopene beta cyclase [Ipomoea sp. Kenyan]710012787 (12)dbj|BAI47577.1|6e-136lycopene beta cyclase [Ipomoea sp. Kenyan]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF002C14- G
                      ____________________________________________________________
consensus G
 
. : . : . : . : . : . :
JMSF002C14- GCAGTGAAATATTTGTGCATTTTGAGGGGCTAAAATGGAACCCAAATCTTTGGAGCATGT
                      ____________________________________________________________
consensus GCAGTGAAATATTTGTGCATTTTGAGGGGCTAAAATGGAACCCAAATCTTTGGAGCATGT
 
. : . : . : . : . : . :
JMSF002C14- GATCTTGTTCCCACCACAAAGCTCTACTGGCTACTGCTCACCACAAGCTTCTCCTCCCAC
JMSF035C01- ACTGCTCACCACAAGCTTCTCCTCCCAC
JMSF043H20- ACTGCTCACCACAAGCTTCTCCTCCCAC
                      ____________________________________________________________
consensus GATCTTGTTCCCACCACAAAGCTCTACTGGCTACTGCTCACCACAAGCTTCTCCTCCCAC
 
. : . : . : . : . : . :
JMSF002C14- GAACCAAAACAATGAGATTTCTTTTTGTTCACTCACCTCCTGCGACATGGTAAGCCTACA
JMSF031G06- ATGAGATTTCTTTTTGTTCACTCACCTCCTGCGACATGGTAAGCCTACA
JMSF035C01- GAACCAAAACAATGAGATTTCTTTTTGTTCACTCACCTCCTGCGACATGGTAAGCCTACA
JMSF043H20- GAACCAAAACAATGAGATTTCTTTTTGTTCACTCACCTCCTGCGACATGGTAAGCCTACA
JMSF020L18- GAGATTTCTTTTTGTTCACTCACCTCCTGCGACATGGTAAGCCTACA
                      ____________________________________________________________
consensus GAACCAAAACAATGAGATTTCTTTTTGTTCACTCACCTCCTGCGACATGGTAAGCCTACA
 
. : . : . : . : . : . :
JMSF002C14- ACTGTCTACCTATGCTGTCCTTGAATTTTCTAATTTTCTCTAGTTTATGTGGGATGGATT
JMSF031G06- ACTGTCTACCTATGCTGTCCTTGAATTTTCTAATTTTCTCTAGTTTATGTGGGATGGATT
JMSF035C01- ACTGTCTACCTATGCTGTCCTTGAATTTTCTAATTTTCTCTAGTTTATGTGGGATGGATT
JMSF043H20- ACTGTCTACCTATGCTGTCCTTGAATTTTCTAATTTTCTCTAGTTTATGTGGGATGGATT
JMSF020L18- ACTGTCTACCTATGCTGTCCTTGAATTTTCTAATTTTCTCTAGTTTATGTGGGATGGATT
                      ____________________________________________________________
consensus ACTGTCTACCTATGCTGTCCTTGAATTTTCTAATTTTCTCTAGTTTATGTGGGATGGATT
 
. : . : . : . : . : . :
JMSF002C14- TCTTGAAATTTTAGTCCAACCCCCCATTTCAGTATATCCCTATTTCCCTCCTGTATTCCT
JMSF031G06- TCTTGAAATTTTAGTCCAACCCCCCATTTCAGTATATCCCTATTTCCCTCCTGTATTCCT
JMSF035C01- TCTTGAAATTTTAGTCCAACCCCCCATTTCAGTATATCCCTATTTCCCTCCTGTATTCCT
JMSF043H20- TCTTGAAATTTTAGTCCAACCCCCCATTTCAGTATATCCCTATTTCCCTCCTGTATTCCT
JMSF020L18- TCTTGAAATTTTAGTCCAACCCCCCATTTCAGTATATCCCTATTTCCCTCCTGTATTCCT
                      ____________________________________________________________
consensus TCTTGAAATTTTAGTCCAACCCCCCATTTCAGTATATCCCTATTTCCCTCCTGTATTCCT
 
. : . : . : . : . : . :
JMSF002C14- TGGTCTTTGTACATACTGTAAATCTTG
JMSF031G06- TGTTCTTTGTACATACTGTAAATCTTGAAACCCCAGATTGTGTTTTCAATAACTGTGGAA
JMSF035C01- TGTTCTTTGTACATACTGTAAATCTTGAAACCCCAGATTGTGTTTTCAATAACTGTGGAA
JMSF043H20- TGTTCTTTGTACATACTGTAAATCTTGAAACCCCAGATTGTGTTTTCAATAACTGTGGAA
JMSF020L18- TGTTCTTTGTACATACTGTAAATCTTGAAACCCCAGATTGTGTTTTCAATAACTGTGGAA
                      ____________________________________________________________
consensus TGTTCTTTGTACATACTGTAAATCTTGAAACCCCAGATTGTGTTTTCAATAACTGTGGAA
 
. : . : . : . : . : . :
JMSF031G06- GGAAGGGTCATGGATACTTTGCTAAAGACCCCTAATGAGCTTGAATTTCTGCACCCACAT
JMSF035C01- GGAAGGGTCATGGATACTTTGCTAAAGACCCCTAATGAGCTTGAATTTCTGCACCCACAT
JMSF043H20- GGAAGGGTCATGGATACTTTGCTAAAGACCCCTAATGAGCTTGAATTTCTGCACCCACAT
JMSF020L18- GGAAGGGTCATGGATACTTTGCTAAAGACCCCTAATGAGCTTGAATTTCTGCACCCACAT
                      ____________________________________________________________
consensus GGAAGGGTCATGGATACTTTGCTAAAGACCCCTAATGAGCTTGAATTTCTGCACCCACAT
 
. : . : . : . : . : . :
JMSF031G06- CATGGGTTTGCAGTTAAAGCTAGTGCCTTTACCTCCCTGAAGCCTCAAAAACAGGAAATT
JMSF035C01- CATGGGTTTGCAGTTAAAGCTAGTGCCTTTACCTCCCTGAAGCCTCAAAAACAGGAAATT
JMSF043H20- CATGGGTTTGCAGTTAAAGCTAGTGCCTTTACCTCCCTGAAGCCTCAAAAACAGGAAATT
JMSF020L18- CATGGGTTTGCAGTTAAAGCTAGTGCCTTTACCTCCCTGAAGCCTCAAAAACAGGAAATT
                      ____________________________________________________________
consensus CATGGGTTTGCAGTTAAAGCTAGTGCCTTTACCTCCCTGAAGCCTCAAAAACAGGAAATT
 
. : . : . : . : . : . :
JMSF031G06- AGGATTGGTTCATGGAAAGCTTGCAGGAATGTTGGTCGTGTTAAGGCCAGCAGTAGTGCC
JMSF035C01- AGGATTGGTTCATGGAAAGCTTGCAGGAATGTTGGTCGTGTTAAGGCCAGCAGTAGTGCC
JMSF043H20- AGGATTGGTTCATGGAAAGCTTGCAGGAATGTTGGTCGTGTTAAGGCCAGCAGTAGTGCC
JMSF020L18- AGGATTGGTTCATGGAAAGCTTGCAGGAATGTTGGTCGTGTTAAGGCCAGCAGTAGTGCC
JMSF051L14- GTTAAGGCCAGCAGTAGTGCC
                      ____________________________________________________________
consensus AGGATTGGTTCATGGAAAGCTTGCAGGAATGTTGGTCGTGTTAAGGCCAGCAGTAGTGCC
 
. : . : . : . : . : . :
JMSF031G06- CTATTAGAACTTGTGCCTGTGACCAAGAAAGAAAATCTTGACTTTGAGCTTCCTATGTTT
JMSF035C01- CTATTAGAACTTGTGCCTGTGACCAAGAAAGAAAATCTTGACTTTGAGCTTCCTATGTTT
JMSF043H20- CTATTAGAACTTGTGCCTGTGACCAAGAAAGAAAATCTTGACTTTGAGCTTCCTATGTTT
JMSF020L18- CTATTAGAACTTGTGCCTGTGACCAAGAAAGAAAATCTTGACTTTGAGCTTCCTATGTTT
JMSF051L14- CTATTAGAACTTGTGCCTGTGACCAAGAAAGAAAATCTTGACTTTGAGCTTCCTATGTTT
                      ____________________________________________________________
consensus CTATTAGAACTTGTGCCTGTGACCAAGAAAGAAAATCTTGACTTTGAGCTTCCTATGTTT
 
. : . : . : . : . : . :
JMSF031G06- GAACCCTCTAAAGGGATTGTTGTGGATTTAGCTGTGGTTGGTGGTGGCCCTGCTGGACTT
JMSF035C01- GAACCCTCTAAAGGGATTGTTGTGGATTTAGCTGTGGTTGGTGGTGGCCCTGCTGGACTT
JMSF043H20- GAACCCTCTAAAGGGATTGTTGTGGATTTAGCTGTGGTTGGTGGTGGCCCTGCTGGACTT
JMSF020L18- GAACCCTCTAAAGGGATTGTTGTGGATTTAGCTGTGGTTGGTGGTGGCCCTGCTGGACTT
JMSF051L14- GAACCCTCTAAAGGGATTGTTGTGGATTTAGCTGTGGTTGGTGGTGGCCCTGCTGGACTT
                      ____________________________________________________________
consensus GAACCCTCTAAAGGGATTGTTGTGGATTTAGCTGTGGTTGGTGGTGGCCCTGCTGGACTT
 
. : . : . : . : . : . :
JMSF031G06- GCAGTGGCACAGCAGGTTTCACAAGCTGGGTTATCAGTTTGTTCAATTGACCCCTCTCCC
JMSF035C01- GCAGTGGCACAGCAGGTTTCACAAGCTGGGTTATCAGTTTGTTCAATTGACCCCTCTCCC
JMSF043H20- GCAGTGGCACAGCAGGTTTCACAAGCTGGGTTATCAGTTTGTTCAATTGACCCCTCTCCC
JMSF020L18- GCAGTGGCACAGCAGGTTTCACAAGCTGGGTTATCAGTTTGTTCAATTGACCCCTCTCCC
JMSF051L14- GCAGTGGCACAGCAGGTTTCACAAGCTGGGTTATCAGTTTGTTCAATTGACCCCTCTCCC
                      ____________________________________________________________
consensus GCAGTGGCACAGCAGGTTTCACAAGCTGGGTTATCAGTTTGTTCAATTGACCCCTCTCCC
 
. : . : . : . : . : . :
JMSF031G06- AAATTGATTTGGCCCAATAATTATGGAGTTTGGGTGGATGAATTTGAGGCCATGGATTTG
JMSF035C01- AAATTGATTTGGCCCAATAATTATGGAGT
JMSF043H20- AAATTGATTTGGCCCAATAATTATGGAGTTTGGGTGGATGAATTTGAGGCCATGGATTTG
JMSF020L18- AAATTGATTTGGCCCAATAATTATGGAGTTTGGGTGGATGAATTTGAGGCCATGGATTTG
JMSF051L14- AAATTGATTTGGCCCAATAATTATGGAGTTTGGGTGGATGAATTTGAGGCCATGGATTTG
                      ____________________________________________________________
consensus AAATTGATTTGGCCCAATAATTATGGAGTTTGGGTGGATGAATTTGAGGCCATGGATTTG
 
. : . : . : . : . : . :
JMSF031G06- TTGGATNGCCTCGATACCACCTGGTCTGGAGCT
JMSF043H20- TTGGATTGCCTCGATACCACCTGGTCTGGAGCTATGGTGTATATTGATGACCGG
JMSF020L18- TTGGATTGCCTCGATACCACCTGGTCTGGAGCTATGGTGTATATTGATGACCGG
JMSF051L14- TTGGATTGCCTCGATACCACCTGGTCTGGAGCTATGGTGTATATTGATGACCGGACGACT
                      ____________________________________________________________
consensus TTGGATTGCCTCGATACCACCTGGTCTGGAGCTATGGTGTATATTGATGACCGGACGACT
 
. : . : . : . : . : . :
JMSF051L14- AAAGATCTTGACAGGCCTTATGGGCGGGTTAACAGGAAGAAACTCAAATCGAAAATGATG
                      ____________________________________________________________
consensus AAAGATCTTGACAGGCCTTATGGGCGGGTTAACAGGAAGAAACTCAAATCGAAAATGATG
 
. : . : . : . : . : . :
JMSF051L14- CAGAAATGCATTACGAATGGTGTTAAATTTCATCAAGCCAAGGTTATAAAGGTGATCCAT
                      ____________________________________________________________
consensus CAGAAATGCATTACGAATGGTGTTAAATTTCATCAAGCCAAGGTTATAAAGGTGATCCAT
 
. : . : . : . : . : . :
JMSF051L14- GAAGAATCGAAATCCATGTTGATTTGCAGTGATGGTGTAACTATTCAAGCGACTGTGGTT
                      ____________________________________________________________
consensus GAAGAATCGAAATCCATGTTGATTTGCAGTGATGGTGTAACTATTCAAGCGACTGTGGTT
 
. : . : . : . : . : . :
JMSF051L14- CTTGATGCAACTGGCTTTTCTAGATGCCTGGTTCAGTACGATAAGCCTTATAATCCGGGC
rJMSF020L18+ ATCCGGGC
                      ____________________________________________________________
consensus CTTGATGCAACTGGCTTTTCTAGATGCCTGGTTCAGTACGATAAGCCTTATAATCCGGGC
 
. : . : . : . : . : . :
JMSF051L14- TATCAAGTTGCTTATGGCATTCTGGCAGAAGTGGAGGAACACCCTTATGATTTGAATAAG
rJMSF020L18+ TATCAAGTTGCTTATGGCATTCTGGCAGAAGTGGAGGAACACCCTTATGA-TTGAATAAG
                      ____________________________________________________________
consensus TATCAAGTTGCTTATGGCATTCTGGCAGAAGTGGAGGAACACCCTTATGATTTGAATAAG
 
. : . : . : . : . : . :
JMSF051L14- ATGGTCTTCATGGATTGGCGAGACTCTCACCTAAACAGTAACTTGG
rJMSF020L18+ ATGGTCTTCATGGATTGGCGAGACTCTCACCTAAACAGTAACTTGGAGCTAAAGGAGAGA
rJMSF031G06+ GCTAAAGGAGAGA
                      ____________________________________________________________
consensus ATGGTCTTCATGGATTGGCGAGACTCTCACCTAAACAGTAACTTGGAGCTAAAGGAGAGA
 
. : . : . : . : . : . :
rJMSF020L18+ AATAAAAGAATCCCGACCTTTCTTTATGCCATGCCATTTTCCTCAACGAGGATATTCCTC
rJMSF035C01+ TTTCCTCAACGAGGATATTCCTC
rJMSF031G06+ AATAAAAGAATCCCGACCTTTCTTTATGCCATGCCATTTTCCTCAACGAGGATATTCCTC
rJMSF002C14+ TTTCCTCAACGAGGATATTCCTC
                      ____________________________________________________________
consensus AATAAAAGAATCCCGACCTTTCTTTATGCCATGCCATTTTCCTCAACGAGGATATTCCTC
 
. : . : . : . : . : . :
rJMSF020L18+ GAAGAAACCTCACTAGTGGCTCGTCCTGGCTTAGATATGAAGGATATTCAGGAAAGAATG
rJMSF035C01+ GNAGAAACCTCACTAGTGGCTCGTCCTGGCTTAGATATGAAGGATATTCAGGAAAGAATG
rJMSF031G06+ GAAGAAACCTCACTAGTGGCTCGTCCTGGCTTAGATATGAAGGATATTCAGGAAAGAATG
rJMSF002C14+ GAAGAAACCTCACTAGTGGCTCGTCCTGGCTTAGATATGAAGGATATTCAGGAAAGAATG
rJMSF043H20+ CTTAGATATGAAGGATATTCAGGAAAGAATG
rJMSF051L14+ CACTAGTGGCTCGTCCTGGCTTAGATATGAAGGATATTCAGGAAAGAATG
                      ____________________________________________________________
consensus GAAGAAACCTCACTAGTGGCTCGTCCTGGCTTAGATATGAAGGATATTCAGGAAAGAATG
 
. : . : . : . : . : . :
rJMSF020L18+ GTGGCTCGTTTAAGGCACTTAGGTATCAACGTCAAGAGCATTGAAGAAGATGAGCGTTGT
rJMSF035C01+ GTGGCTCGTTTAAGGCACTTAGGTATCAACGTCAAGAGCATTGAAGAAGATGAGCGTTGT
rJMSF031G06+ GTGGCTCGTTTAAGGCACTTAGGTATCAACGTCAAGAGCATTGAAGAAGATGAGCGTTGT
rJMSF002C14+ GTGGCTCGTTTAAGGCACTTAGGTATCAACGTCAAGAGCATTGAAGAAGATGAGCGTTGT
rJMSF043H20+ GTGGCTCGTTTAAGGCACTTAGGTATCAACGTCAAGAGCATTGAAGAAGATGAGCGTTGT
rJMSF051L14+ GTGGCTCGTTTAAGGCACTTAGGTATCAACGTCAAGAGCATTGAAGAAGATGAGCGTTGT
                      ____________________________________________________________
consensus GTGGCTCGTTTAAGGCACTTAGGTATCAACGTCAAGAGCATTGAAGAAGATGAGCGTTGT
 
. : . : . : . : . : . :
rJMSF020L18+ GTTATCCCAATGGGAGGTCCCCTACCCGTGATACCCCAAAGAGTTGTTGGAATTGGCGGT
rJMSF035C01+ GTTATCCCAATGGGAGGTCCCCTACCCGTGATACCCCAAAGAGTTGTTGGAATTGGCGGT
rJMSF031G06+ GTTATCCCAATGGGAGGTCCCCTGCCCGTGATACCCCAAAGAGTTGTTGGAATTGGCGGT
rJMSF002C14+ GTTATCCCAATGGGAGGTCCCCTACCCGTGATACCCCAAAGAGTTGTTGGAATTGGCGGT
rJMSF043H20+ GTTATCCCAATGGGAGGTCCCCTACCCGTGATACCCCAAAGAGTTGTTGGAATTGGCGGT
rJMSF051L14+ GTTATCCCAATGGGAGGTCCCCTACCCGTGATACCCCAAAGAGTTGTTGGAATTGGCGGT
                      ____________________________________________________________
consensus GTTATCCCAATGGGAGGTCCCCTACCCGTGATACCCCAAAGAGTTGTTGGAATTGGCGGT
 
. : . : . : . : . : . :
rJMSF020L18+ ACTGCAGGTATGGTTCATCCCTCGACTGGATATATGGTGGCGAGGACTCTGGCTGCAGCT
rJMSF035C01+ ACTGCAGGTATGGTTCATCCCTCGACTGGATATATGGTGGCGAGGACTCTGGCTGCAGCT
rJMSF031G06+ ACTGCAGGTATGGTTCATCCCTCGACTGGATATATGGTGGCGAGGACTCTGGCTGCAGCT
rJMSF002C14+ ACTGCAGGTATGGTTCATCCCTCGACTGGATATATGGTGGCGAGGACTCTGGCTGCAGCT
rJMSF043H20+ ACTGCAGGTATGGTTCATCCCTCGACTGGATATATGGTGGCGAGGACTCTGGCTGCAGCT
rJMSF051L14+ ACTGCAGGTATGGTTCATCCCTCGACTGGATATATGGTGTCGAGGACTCTGGCTGCAGCT
                      ____________________________________________________________
consensus ACTGCAGGTATGGTTCATCCCTCGACTGGATATATGGTGGCGAGGACTCTGGCTGCAGCT
 
. : . : . : . : . : . :
rJMSF020L18+ CCAGTTGTTGCCAATGCAATCATTCAGTATCTAGGCTCCGAGAGAAGCCTTCTGGGCAAC
rJMSF035C01+ CCAGTTGTTGCCAATGCAATCATTCAGTATCTAGGCTCCGAGAGAAGCCTTCTGGGCAAC
rJMSF031G06+ CCAGTTGTTGCCAATGCAATCATTCAGTATCTAGGCTCCGAGAGAAGCCTTCTGGGCAAC
rJMSF002C14+ CCAGTTGTTGCCAATGCAATCATTCAGTATCTAGGCTCCGAGAGAAGCCTTCTGGGCAAC
rJMSF043H20+ CCAGTTGTTGCCAATGCAATCATTCAGTATCTAGGCTCCGAGAGAAGCCTTCTGGGCAAC
rJMSF051L14+ CCAGTTGTTGCCAATGCAATCATTCAGTATCTAGGCTCCGAGAGAAGCCTTCTGGGCAAC
                      ____________________________________________________________
consensus CCAGTTGTTGCCAATGCAATCATTCAGTATCTAGGCTCCGAGAGAAGCCTTCTGGGCAAC
 
. : . : . : . : . : . :
rJMSF020L18+ GAATTATCAGCATCTGTTTGGAAAGACCTGTGGCCAATAGAGAGGAGGCGGCAAAGGGAA
rJMSF035C01+ GAATTATCAGCATCTGTTTGGAAAGACCTGTGGCCAATAGAGAGGAGGCGGCAAAGGGAA
rJMSF031G06+ GAATTATCAGCATCTGTTTGGAAAGACCTGTGGCCAATAGAGAGGAGGCGGCAAAGGGAA
rJMSF002C14+ GAATTATCAGCATCTGTTTGGAAAGACCTGTGGCCAATAGAGAGGAGGCGGCAAAGGGAA
rJMSF043H20+ GAATTATCAGCATCTGTTTGGAAAGACCTGTGGCCAATAGAGAGGAGGCGGCAAAGGGAA
rJMSF051L14+ GAATTATCAGCATCTGTTTGGAAAGACCTGTGGCCAATAGAGAGGAGGCGGCAAAGGGAA
                      ____________________________________________________________
consensus GAATTATCAGCATCTGTTTGGAAAGACCTGTGGCCAATAGAGAGGAGGCGGCAAAGGGAA
 
. : . : . : . : . : . :
rJMSF020L18+ TTCTTCTGTTTTGGTATGGATATTCTACTGAAGCTCGATTTGCCAGCCACAAGAAGATTT
rJMSF035C01+ TTCTTCTGTTTTGGTATGGATATTCTACTGAAGCTCGATTTGCCAGCCACAAGAAGATTT
rJMSF031G06+ TTCTTCTGTTTTGGTATGGATATTCTACTGAAGCTCGATTTGCCAGCCACAAGAAGATTT
rJMSF002C14+ TTCTTCTGTTTTGGTATGGATATTCTACTGAAGCTCGATTTGCCAGCCACAAGAAGATTT
rJMSF043H20+ TTCTTCTGTTTTGGTATGGATATTCTACTGAAGCTCGATTTGCCAGCCACAAGAAGATTT
rJMSF051L14+ TTCTTCTGTTTTGGTATGGATATTCTACTGAAGCTCGATTTGCCAGCCACAAGAAGATTT
                      ____________________________________________________________
consensus TTCTTCTGTTTTGGTATGGATATTCTACTGAAGCTCGATTTGCCAGCCACAAGAAGATTT
 
. : . : . : . : . : . :
rJMSF020L18+ TTTGATGCGTTTTTTGATCTAGAACCCCGTTATTGGCATGGATTTCTGTCATCCCGGCTG
rJMSF035C01+ TTTGATGCGTTTTTTGATCTAGAACCCCGTTATTGGCATGGATTTCTGTCATCCCGGCTG
rJMSF031G06+ TTTGATGCGTTTTTTGATCTAGAACCCCGTTATTGGCATGGATTTCTGTCATCCCGGCTG
rJMSF002C14+ TTTGATGCGTTTTTTGATCTAGAACCCCGTTATTGGCATGGATTTCTGTCATCCCGGCTG
rJMSF043H20+ TTTGATGCGTTTTTTGATCTAGAACCCCGTTATTGGCATGGATTTCTGTCATCCCGGCTG
rJMSF051L14+ TTTGATGCGTTTTTTGATCTAGAACCCCGTTATTGGCATGGATTTCTGTCATCCCGGCTG
                      ____________________________________________________________
consensus TTTGATGCGTTTTTTGATCTAGAACCCCGTTATTGGCATGGATTTCTGTCATCCCGGCTG
 
. : . : . : . : . : . :
rJMSF020L18+ TTTCTTCGTGAGCTCATATTTTTTGGTCTCTCGCTTTTCTCTCATGCCAGTAATACTTCT
rJMSF035C01+ TTTCTTCGTGAGCTCATATTTTTTGGTCTCTCGCTTTTCTCTCATGCCAGTAATACTTCT
rJMSF031G06+ TTTCTTCGTGAGCTCATATTTTTTGGTCTCTCGCTTTTCTCTCATGCCAGTAATACTTCT
rJMSF002C14+ TTTCTTCGTGAGCTCATATTTTTTGGTCTCTCGCTTTTCTCTCATGCCAGTAATACTTCT
rJMSF043H20+ TTTCTTCGTGAGCTCATATTTTTTGGTCTCTCGCTTTTCTCTCATGCCAGTAATACTTCT
rJMSF051L14+ TTTCTTCGTGAGCTCATATTTTTTGGTCTCTCGCTTTTCTCTCATGCCAGTAATACTTCT
                      ____________________________________________________________
consensus TTTCTTCGTGAGCTCATATTTTTTGGTCTCTCGCTTTTCTCTCATGCCAGTAATACTTCT
 
. : . : . : . : . : . :
rJMSF020L18+ AGGTTAGAGATAATGACCAAGGGCACTTTGCCTCTGGTAAACATGATCAACAATT
rJMSF035C01+ AGGTTAGAGATAATGACCAAGGGCACTTTGCCTCTGGTAAACATGATCAACAATTTGTTA
rJMSF031G06+ AGGTTAGAGATAATGACCAAGGGCACTTTGCCTCTGGTAAACATGATCAACAATTTGTTA
rJMSF002C14+ AGGTTAGAGATAATGACCAAGGGCACTTTGCCTCTGGTAAACATGATCAACAATTTGTTA
rJMSF043H20+ AGGTTAGAGATAATGACCAAGGGCACTTTGCCTCTGGTAAACATGATCAACAATTTGTTA
rJMSF051L14+ AGGTTAGAGATAATGACCAAGGGCACTTTGCCTCTGGTAAACATGATCAACAATTTGTTA
                      ____________________________________________________________
consensus AGGTTAGAGATAATGACCAAGGGCACTTTGCCTCTGGTAAACATGATCAACAATTTGTTA
 
. : . : . : . : . : . :
rJMSF035C01+ CAGGATATAGATTAAGTAATTTTGAGTTGCACTTTGGTTTCAAATTATGTATGTAGCATT
rJMSF031G06+ CAGGATATAGATTAAGTAATTTTGAGTTGCACTTTGGTTTCAAATTATGTATGTAGCATT
rJMSF002C14+ CAGGATATAGATTAAGTAATTTTGAGTTGCACTTTGGTTTCAAATTATGTATGTAGCATT
rJMSF043H20+ CAGGATATAGATTAAGTAATTTTGAGTTGCACTTTGGTTTCAAATTATGTATGTAGCATT
rJMSF051L14+ CAGGATATAGATTAAGTAATTTTGAGTTGCACTTTGGTTTCAAATTATGTATGTAGCATT
                      ____________________________________________________________
consensus CAGGATATAGATTAAGTAATTTTGAGTTGCACTTTGGTTTCAAATTATGTATGTAGCATT
 
. : . : . : . : . : . :
rJMSF035C01+ TCCTCTGTCCCT
rJMSF031G06+ TCCTCTGTCCCTT
rJMSF002C14+ TCCTCTGTCCCTT
rJMSF043H20+ TCCTCTGTCCCTTTTTTAGCTCTCAAG
rJMSF051L14+ TCCTCTGTCCCTTTTTTAGCTCTCAAGAATTTCCAAGATTGGTAATACAGTCAAATGTTG
                      ____________________________________________________________
consensus TCCTCTGTCCCTTTTTTAGCTCTCAAGAATTTCCAAGATTGGTAATACAGTCAAATGTTG