Contig 012782:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF042N18Sequence764010861 (2)ref|XP_007222646.1|4e-11hypothetical protein PRUPE_ppa008554mg [Prunus persica] gb|EMJ23845.1| hypotheti468012782 (2)ref|XP_002312293.1|3e-08hypothetical protein POPTR_0008s09770g [Populus trichocarpa] gb|EEE89660.1| hypo
JMSF051C24Sequence553010861 (2)ref|XP_007222646.1|1e-20hypothetical protein PRUPE_ppa008554mg [Prunus persica] gb|EMJ23845.1| hypotheti718012782 (2)emb|CDP00461.1|2e-14unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF051C24+ AAAAGCCTGCAGTATCAGCCATGAAAGGCAAAATTCCAAGCTCTCCAGGAGGGAAGCT
                      ____________________________________________________________
consensus AAAAGCCTGCAGTATCAGCCATGAAAGGCAAAATTCCAAGCTCTCCAGGAGGGAAGCT
 
. : . : . : . : . : . :
rJMSF051C24+ AGCCAGCTTCTTGAACTCCCTCTTCAACCAAAAAACTAGCTCTAAGAAGAAGAAGAAACA
                      ____________________________________________________________
consensus AGCCAGCTTCTTGAACTCCCTCTTCAACCAAAAAACTAGCTCTAAGAAGAAGAAGAAACA
 
. : . : . : . : . : . :
rJMSF051C24+ GAAATTGAACTCGAACGATAATGAAGATTCTCAAACCCCATCTGGGTGGATTAGGAGGAG
                      ____________________________________________________________
consensus GAAATTGAACTCGAACGATAATGAAGATTCTCAAACCCCATCTGGGTGGATTAGGAGGAG
 
. : . : . : . : . : . :
rJMSF042N18+ C
rJMSF051C24+ GAGAAGCAGCTTAAGTGAACTCTATGCAAAGAGAAGCTCATCAAACACTACTGTTTCTGC
                      ____________________________________________________________
consensus GAGAAGCAGCTTAAGTGAACTCTATGCAAAGAGAAGCTCATCAAACACTACTGTTTCTGC
 
. : . : . : . : . : . :
rJMSF042N18+ ATCTTCAAATTCTGGGTTTAGAACACCCCCTCCATATCCCAAGAACTCATCATGCAAGGA
rJMSF051C24+ ATCTTCAAATTCTGGGTTTAGAACACCCCCTCCATATCCCAAGAACTCATCATGCAAGGA
                      ____________________________________________________________
consensus ATCTTCAAATTCTGGGTTTAGAACACCCCCTCCATATCCCAAGAACTCATCATGCAAGGA
 
. : . : . : . : . : . :
rJMSF042N18+ TAATCACAACCCAGAAAGCATGTTTAAGTTCATCAGCAGTGGGATTAGTTCAGAGAGGAG
rJMSF051C24+ TAATCACAACCCAGAAAGCATGTTTAAGTTCATCAGCAGTGGGATTAGTTCAGAGAGGAG
                      ____________________________________________________________
consensus TAATCACAACCCAGAAAGCATGTTTAAGTTCATCAGCAGTGGGATTAGTTCAGAGAGGAG
 
. : . : . : . : . : . :
rJMSF042N18+ GACGATGATGATGACGAGCGTTCATCACTGGGCAGATGAATATCCATCAGAAGAGCATGA
rJMSF051C24+ GACGATGATGATGACGAGCGTTCATCACTGGGCAGATGAATATCCATCAGAAGAGCATGA
                      ____________________________________________________________
consensus GACGATGATGATGACGAGCGTTCATCACTGGGCAGATGAATATCCATCAGAAGAGCATGA
 
. : . : . : . : . : . :
rJMSF042N18+ AGAAAGAAAGTTTGAGGATGATTATGATCAGGGGACAGATAGTGATTCCAGCTCTGATCT
rJMSF051C24+ AGAAAGAAAGTTTGAGGATGATTATGATCAGGGGACAGATAGTGATTCCAGCTCTGATCT
                      ____________________________________________________________
consensus AGAAAGAAAGTTTGAGGATGATTATGATCAGGGGACAGATAGTGATTCCAGCTCTGATCT
 
. : . : . : . : . : . :
rJMSF042N18+ GTTTGATTTGCCAAACAGAGAATTATTGGATTGCTATTCAACTGGTTTGCCTGTTTATCA
rJMSF051C24+ GTTTGATTTGCCAAACAGAGAATTATTGGATTGCTATTCAACTGGTTTGCCTGTTTATCA
                      ____________________________________________________________
consensus GTTTGATTTGCCAAACAGAGAATTATTGGATTGCTATTCAACTGGTTTGCCTGTTTATCA
 
. : . : . : . : . : . :
rJMSF042N18+ GACTACCCAGATGAATGCTATCAACAGTAGTAATGCACCCATTTCTGCCACCGTCATTTG
rJMSF051C24+ GACTACCCAGATGAATGCTATCAACAGTAGTAATGCACCCATTTCTGCCACCGTCATTTG
                      ____________________________________________________________
consensus GACTACCCAGATGAATGCTATCAACAGTAGTAATGCACCCATTTCTGCCACCGTCATTTG
 
. : . : . : . : . : . :
rJMSF042N18+ ATTTGATTTGATTTGATTTTGTTCGTTCTGAGATTTAAATTTTTTCTACTTAATTAGATA
rJMSF051C24+ ATTTGATTTGATTTGATTTTGTTCGTTCTGAGATTTAAATTTTTTCTACTTAATTAGATA
                      ____________________________________________________________
consensus ATTTGATTTGATTTGATTTTGTTCGTTCTGAGATTTAAATTTTTTCTACTTAATTAGATA
 
. : . : . : . : . : . :
rJMSF042N18+ ACCCCAAATTTTATGTACTAGTATTGATGTAC
rJMSF051C24+ ACCCCAAATTTTATGTACTAGTATTGATGTACATAGGGTAAAACGTTTTATCTCAAACAT
                      ____________________________________________________________
consensus ACCCCAAATTTTATGTACTAGTATTGATGTACATAGGGTAAAACGTTTTATCTCAAACAT