Contig 012779:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020J04Sequence570003881 (4)ref|XP_006343787.1|73.9PREDICTED: uncharacterized protein LOC102590733 [Solanum tuberosum]155012779 (5)
JMFN035K07Sequence625012779 (5)ref|XP_009587677.1|369PREDICTED: uncharacterized protein LOC104085370 [Nicotiana tomentosiformis]
JMSF023F24Sequence646003881 (4)ref|XP_009587677.1|126PREDICTED: uncharacterized protein LOC104085370 [Nicotiana tomentosiformis]734012779 (5)ref|XP_009587677.1|389PREDICTED: uncharacterized protein LOC104085370 [Nicotiana tomentosiformis]
JMSF047J18Sequence707003881 (4)ref|XP_009587677.1|151PREDICTED: uncharacterized protein LOC104085370 [Nicotiana tomentosiformis]738012779 (5)ref|XP_009587677.1|355PREDICTED: uncharacterized protein LOC104085370 [Nicotiana tomentosiformis]
JMSF050N23Sequence538003881 (4)gb|EYU33479.1|6e-06hypothetical protein MIMGU_mgv1a0044082mg, partial [Erythranthe guttata]684012779 (5)ref|XP_009587677.1|319PREDICTED: uncharacterized protein LOC104085370 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF023F24+                                                         ACTGCAGTTTGAT
                      ____________________________________________________________
consensus                                                            ACTGCAGTTTGAT
 
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JMFN035K07-                      AATTTACAACCTAGGGACTGTTCTGTATGGGTTAGCAGAGGACTTGTCA
rJMSF023F24+          TTCCATCGGGCAATTTACAACCTAGGGACTGTTCTGTATGGGTTAGCAGAGGACTTGTCA
rJMSF047J18+                                        GTTCTGTATGGGTTAGCAGAGGACNTGTCA
                      ____________________________________________________________
consensus             TTCCATCGGGCAATTTACAACCTAGGGACTGTTCTGTATGGGTTAGCAGAGGACTTGTCA
 
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JMFN035K07-           AGAACAGGGGGAGCCACAAATTCTAAAGATGTTTCCCCAAATGAGTTGTACAGTCAGTCT
rJMSF023F24+          AGAACAGGGGGAGCCACAAATTCTAAAGATGTTTCCCCAAATGAGTTGTACAGTCAGTCT
rJMSF047J18+          AGAACAGGGGGAGCCACAAATTCTAAAGATGTTTCCCCAAATGAGTTGTACAGTCAGTCT
rJMSF050N23+                                              CCAAATGAGTTGTACAGTCAGTCT
                      ____________________________________________________________
consensus             AGAACAGGGGGAGCCACAAATTCTAAAGATGTTTCCCCAAATGAGTTGTACAGTCAGTCT
 
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JMFN035K07-           GCAATATATATTGCTGCTGCACATGCACTCAAACCAAATTACTCGGTTTACACAAGTGCT
rJMSF023F24+          GCAATATATATTGCTGCTGCACATGCACTCAAACCAAATTACTCGGTTTACACAAGTGCT
rJMSF047J18+          GCAATATATATTGCTGCTGCACATGCACTCAAACCAAATTACTCGGTTTACACAAGTGCT
rJMSF050N23+          GCAATATATATTGCTGCTGCACATGCACTCAAACCAAATTACTCGGTTTACACAAGTGCT
                      ____________________________________________________________
consensus             GCAATATATATTGCTGCTGCACATGCACTCAAACCAAATTACTCGGTTTACACAAGTGCT
 
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JMFN035K07-           CTGAAACTCGTCCGTTCAATGCTGCCTCTACCGTATCTGAAGGTTGGATATCTTTCTGCC
rJMSF023F24+          CTGAAACTCGTCCGTTCAATGCTGCCTCTACCGTATCTGAAGGTTGGATATCTTTCTGCC
rJMSF047J18+          CTGAAACTCGTCCGTTCAATGCTGCCTCTACCGTATCTGAAGGTTGGATATCTTTCTGCC
rJMSF050N23+          CTGAAACTCGTCCGTTCAATGCTGCCTCTACCGTATCTGAAGGTTGGATATCTTTCTGCC
                      ____________________________________________________________
consensus             CTGAAACTCGTCCGTTCAATGCTGCCTCTACCGTATCTGAAGGTTGGATATCTTTCTGCC
 
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JMFN035K07-           CCACCTTCTGGAAATCCACTTGCACCACATAGTGATTGGAAACGTTCTCAATTTGTTCTG
rJMSF023F24+          CCACCTTCTGGAAATCCACTTGCACCACATAGTGATTGGAAACGTTCTCAATTTGTTCTG
rJMSF047J18+          CCACCTTCTGGAAATCCACTTGCACCACATAGTGATTGGAAACGTTCTCAATTTGTTCTG
rJMSF050N23+          CCACCTTCTGGAAATCCACTTGCACCACATAGTGATTGGAAACGTTCTCAATTTGTTCTG
                      ____________________________________________________________
consensus             CCACCTTCTGGAAATCCACTTGCACCACATAGTGATTGGAAACGTTCTCAATTTGTTCTG
 
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JMFN035K07-           AACCAGGAAGGACTACACCAGATTAGTAAAGTTGAGCAAAGACGAAGCCTCTCTTCAAAT
rJMSF023F24+          AACCAGGAAGGGCTACACCAGATTAGTAAAGTTGAGCAAAGACGAAGCCTCTCTTCAAAT
rJMSF047J18+          AACCAGGAAGGACTACACCAGATTAGTAAAGTTGAGCAAAGACGAAGCCTCTCTTCAAAT
rJMSF050N23+          AACCAGGAAGGACTACACCAGATTAGTAAAGTTGAGCAAAGACGAAGCCTCTCTTCAAAT
                      ____________________________________________________________
consensus             AACCAGGAAGGACTACACCAGATTAGTAAAGTTGAGCAAAGACGAAGCCTCTCTTCAAAT
 
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JMFN035K07-           TCTGGAGATAGCACAAGTCCTAGTAGACAAGCAATCAAAGTTGATGTGCCGGATATTGTG
rJMSF023F24+          TCTGGAGATAGCACAAGTCCTAGTAGACAAGCAATCAAAGTTGATGTGCCGGATATTGTG
rJMSF047J18+          TCTGGAGATAGCACAAGTCCTAGTAGACAAGCAATCAAAGTTGATGTGCCGGATATTGTG
rJMSF050N23+          TCTGGAGATAGCACAAGTCCTAGTAGACAAGCAATCAAAGTTGATGTGCCGGATATTGTG
                      ____________________________________________________________
consensus             TCTGGAGATAGCACAAGTCCTAGTAGACAAGCAATCAAAGTTGATGTGCCGGATATTGTG
 
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JMFN035K07-           TCTGTTTCTGCATGTGCTGATCTGACATTACCGCCTGGGGCAGGCCTTTGCATTAATACA
rJMSF023F24+          TCTGTTTCTGCATGTGCTGATCTGACATTACCGCCTGGGGCAGGCCTTTGCATTAATACA
rJMSF047J18+          TCTGTTTCTGCATGTGCTGATCTGACATTACCGCCTGGGGCAGGCCTTTGCATTAATACA
rJMSF050N23+          TCTGTTTCTGCATGTGCTGATCTGACATTACCGCCTGGGGCAGGCCTTTGCATTAATACA
                      ____________________________________________________________
consensus             TCTGTTTCTGCATGTGCTGATCTGACATTACCGCCTGGGGCAGGCCTTTGCATTAATACA
 
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JMFN035K07-           ATTCATGGACCAGTCTACATGATTGCTGATTCATGGGAGTCCTTGGACTGGTGGCTTGAT
rJMFF020J04+                                     GATTCATGGGAGTCCTNGGACTGGTGGNTTGAT
rJMSF023F24+          ATTCATGGACCAGTCTACATGATTGCTGATTCATGGGAGTCCTTGGACTGGTGGCTTGAT
rJMSF047J18+          ATTCATGGACCAGTCTACATGATTGCTGATTCATGGGAGTCCTTGGACTGGTGGCTTGAT
rJMSF050N23+          ATTCATGGACCAGTCTACATGATTGCTGATTCATGGGAGTCCTTGGACTGGTGGCTTGAT
                      ____________________________________________________________
consensus             ATTCATGGACCAGTCTACATGATTGCTGATTCATGGGAGTCCTTGGACTGGTGGCTTGAT
 
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JMFN035K07-           GCTATTCGCTTAACTTACACAATTTATGCACGGGGCAAGAGTGATGTTTTGGCAGGTATA
rJMFF020J04+          GNTATTCGCTTAACTTACACAANNTANGCNCGGGGCAAGAGTGATGTTNTGGCAGGTATA
rJMSF023F24+          GCTATTCGCTTAACTTACACAATTTATGCACGGGGCAAGAGTGATGTTTTGGCAGGTATA
rJMSF047J18+          GCTATTCGCTTAACTTACACAATTTATGCACGGGGCAAGAGTGATGTTTTGGCAGGTATA
rJMSF050N23+          GCTATTCGCTTAACTTACACAATTTATGCACGGGGCAAGAGTGATGTTTTGGCAGGTATA
                      ____________________________________________________________
consensus             GCTATTCGCTTAACTTACACAATTTATGCACGGGGCAAGAGTGATGTTTTGGCAGGTATA
 
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JMFN035K07-           ATAACTGGGTAATTTTGTCTAGGTAACTCCATGGGG                        
rJMFF020J04+          ATAACTGGGTAATNTNGTNTAGGTAANTCCATGGGGAGGANTAGCNTGAA          
rJMSF023F24+          ATAACTGGGTAATTTTGTCTAGGTAACTCCATGGGGAGGACTAGCCTGAATTGATGAAAC
rJMSF047J18+          ATAACTGGGTAATTTTGTCTAGGTAACTCCATGGGGAGGACTAGCCTGAATTGATGAAAC
rJMSF050N23+          ATAACTGGGTAATTTTGTCTAGGTAACTCCATGGGGAGGACTAGCCTGAATTGATGAAAC
                      ____________________________________________________________
consensus             ATAACTGGGTAATTTTGTCTAGGTAACTCCATGGGGAGGACTAGCCTGAATTGATGAAAC
 
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rJMSF023F24+          ACCGATTGTCTGCTGCTCATGTACACATGTACATTATTTGCCCGTTGATACGCATTCCTA
rJMSF047J18+          ACCGATTGTCTGCTGCTCATGTACACATGTACATTATTTGCCCGTTGATACGCATTCCTA
rJMSF050N23+          ACCGATTGTCTGCTGCTCATGTACACATGTACATTATTTGCCCGTTGATACGCATTCCTA
                      ____________________________________________________________
consensus             ACCGATTGTCTGCTGCTCATGTACACATGTACATTATTTGCCCGTTGATACGCATTCCTA
 
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rJMSF023F24+          T                                                           
rJMSF047J18+          TTTCCCTCTATGGATGAATGTAGTTTATAGAATTACACC                     
rJMSF050N23+          TTTCCCTCTATGGATGAATGTAGTTTATAGAATTACACCCTNGAGTTGATGTCCAAATGT
                      ____________________________________________________________
consensus             TTTCCCTCTATGGATGAATGTAGTTTATAGAATTACACCCTNGAGTTGATGTCCAAATGT