Contig 012777:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS154B08Sequence250012777 (3)ref|XP_011093240.1|128PREDICTED: uncharacterized protein LOC105173250 [Sesamum indicum]
JMSF050G10Sequence517012777 (3)ref|XP_006347962.1|188PREDICTED: uncharacterized protein LOC102598946 [Solanum tuberosum]
JMSF050H10Sequence631006260 (5)ref|XP_004229746.1|162PREDICTED: uncharacterized protein LOC101257405 [Solanum lycopersicum]763012777 (3)ref|XP_011089387.1|310PREDICTED: uncharacterized protein LOC105170351 [Sesamum indicum]

Alignment

This contig is upended


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rJMSF050H10+                           GCTGGTTCAAGCTCACCCTATTACCTGTTAATAGTGAGCCTAC
                      ____________________________________________________________
consensus                              GCTGGTTCAAGCTCACCCTATTACCTGTTAATAGTGAGCCTAC
 
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rJMSF050H10+          TAATGGCAACAAGGAGCTTTCAGAGGCATTTTCCTTTTGCGATGAGTGGAAGCTTGCCCT
                      ____________________________________________________________
consensus             TAATGGCAACAAGGAGCTTTCAGAGGCATTTTCCTTTTGCGATGAGTGGAAGCTTGCCCT
 
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rJMSF050H10+          TGACCGTGTCCCAGACACTGTTGCATCAGAAGCCATCAAAAGCTTCATAAATGTTGTCCA
                      ____________________________________________________________
consensus             TGACCGTGTCCCAGACACTGTTGCATCAGAAGCCATCAAAAGCTTCATAAATGTTGTCCA
 
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rJMSF050G10+                             ACTGAAGAGCTGAAGANGAAGANGTGAACNGAATCTGCATC
JMFS154B08-                                       CTGAAGATGAAGAAGCGAACTGAATCTGCATC
rJMSF050H10+          TTCTATATTTTTGAGACAGACTGAAGAGCTGAAGATGAAGAAGTGAACTGAATCTGCATC
                      ____________________________________________________________
consensus             TTCTATATTTTTGAGACAGACTGAAGAGCTGAAGATGAAGAAGTGAACTGAATCTGCATC
 
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rJMSF050G10+          AAANGAGCTTGAGAAAAAAGCNTCANGTCTGAGGAGTATTGAGAAGAAGTATTACAATTC
JMFS154B08-           AAAAGAGCTTGAGAAAAAAGCATCAAGTCTGAGGAGTATTGAGAAGAAGTATTACAATTC
rJMSF050H10+          AAAAGAGCTTGAGAAAAAAGCATCAAGTCTGAGGAGTATTGAGAAGAAGTATTACAATTC
                      ____________________________________________________________
consensus             AAAAGAGCTTGAGAAAAAAGCATCAAGTCTGAGGAGTATTGAGAAGAAGTATTACAATTC
 
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rJMSF050G10+          ATACTCCATGGTTGGTATTGGCCTTCNNGATAACGGCCCTGATACTGGACATGTGTCGGA
JMFS154B08-           ATACTCCATGGTTGGTATTGGCCTTCCTGATAACGGCCCTGATACTGGACATGTGTTGGA
rJMSF050H10+          ATACTCCATGGTTGGTATTGGCCTTCCTGATAACGGCCCTGATACTGGACATGTGTTGGA
                      ____________________________________________________________
consensus             ATACTCCATGGTTGGTATTGGCCTTCCTGATAACGGCCCTGATACTGGACATGTGTTGGA
 
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rJMSF050G10+          TGCGCGGGACCCTNTGGCTGAGAAAAAAGCCNAGCTTGCATCTNGCCAGCGTAGGGTGGA
JMFS154B08-           TGCGCGGGACCCTTTGGCTGAGAAAAAAGCCGAGCTTGCATCTTGCCAGCGTAGGGTGGA
rJMSF050H10+          TGCGCGGGACCCTTTGGCTGAGAAAAAAGCCGAGCTTGCATCTTGCCAGCGTAGGGTGGA
                      ____________________________________________________________
consensus             TGCGCGGGACCCTTTGGCTGAGAAAAAAGCCGAGCTTGCATCTTGCCAGCGTAGGGTGGA
 
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rJMSF050G10+          GGATGAGATGCTAAAACACTCTAAGGCAGTGGAAGTTACCCGGGCAATGACTCTAAATNA
JMFS154B08-           GGATGAGATGCTAAAACACTCTAAGGCAGTGGAAGTTA                      
rJMSF050H10+          GGATGAGATGCTAAAACACTCTAAGGCAGTGGAAGTTACCCGGGCAATGACTCTAAATAA
                      ____________________________________________________________
consensus             GGATGAGATGCTAAAACACTCTAAGGCAGTGGAAGTTACCCGGGCAATGACTCTAAATAA
 
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rJMSF050G10+          CATTCAGACTGGNTNNCCAGGAGTGTTCCAGNCCATGACAAGNTTNTNTNCCTTGTTTNC
rJMSF050H10+          CATTCAGACTGGTTTGCCAGGAGTGTTCCAGGCCATGACAAGTTTCTCTGCCTTGTTTAC
                      ____________________________________________________________
consensus             CATTCAGACTGGTTTGCCAGGAGTGTTCCAGGCCATGACAAGTTTCTCTGCCTTGTTTAC
 
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rJMSF050G10+          NCAGGCCCNTGNGGCTGTTTNCACCCGTTCATATTNTATNCAAATGCTGTTACTATTTCA
rJMSF050H10+          ACAGGCCCTTGAGGCTGTTTGCACCCGTTCATATTCTATTTAAATGCTGTTACTATTTCA
                      ____________________________________________________________
consensus             ACAGGCCCTTGAGGCTGTTTGCACCCGTTCATATTCTATTTAAATGCTGTTACTATTTCA
 
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rJMSF050G10+          TNTCCAGCAAATTTCCCAATNTGTGTGCCAAGTTGGAGAAAGAAAGGGCTGGCAGTTTTN
rJMSF050H10+          TTTCCAGCAAATTTCCCAATTTTTGTGCCAAGTTGGAGAAAGAAAGGGCTGGCAGTTTTT
                      ____________________________________________________________
consensus             TTTCCAGCAAATTTCCCAATTTTTGTGCCAAGTTGGAGAAAGAAAGGGCTGGCAGTTTTT
 
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rJMSF050G10+          GGTGGTGGGCTCTTTNTNGTCAATNGCCNTNCTATTAGNATATGTAGATATT        
rJMSF050H10+          GGTGGTGGGCTCTTTTTTGTCAATTGCCTTTATATTTGTATATGTAGATATTTGAAAATT
                      ____________________________________________________________
consensus             GGTGGTGGGCTCTTTTTTGTCAATTGCCTTTCTATTTGTATATGTAGATATTTGAAAATT
 
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rJMSF050H10+          TTGCACTTTTGGCACCTATTCTGTTGGTGGGAGGATTGTCGCTGTACCAGGAAATTGTTG
                      ____________________________________________________________
consensus             TTGCACTTTTGGCACCTATTCTGTTGGTGGGAGGATTGTCGCTGTACCAGGAAATTGTTG