Contig 012774:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF049P17+                                                AGATGGCAGCCGCAGCGNAGAT
                      ____________________________________________________________
consensus                                                   AGATGGCAGCCGCAGCGNAGAT
 
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rJMSF046J23+                                       GAATGTAGCTGAGAGAAGTAGTGTTGAAAAG
rJMSF049P17+          GTGGTGGAGAAAGGAAATGACACGCCAGAGAATGTAGCTGAGAGAAGTAGTGTTGAAAAG
                      ____________________________________________________________
consensus             GTGGTGGAGAAAGGAAATGACACGCCAGAGAATGTAGCTGAGAGAAGTAGTGTTGAAAAG
 
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rJMSF046J23+          AGAGAGAATGGTGGTTGTGGTGAGAGTAATTCTGTGCAGACAAGCTCTTCACGGTGGCCT
rJMSF049P17+          AGAGAGAATGGTGGTTGTGGTGAGAGTAATTCTGTGCAGACAAGCTCTTCACGGTGGCCT
                      ____________________________________________________________
consensus             AGAGAGAATGGTGGTTGTGGTGAGAGTAATTCTGTGCAGACAAGCTCTTCACGGTGGCCT
 
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rJMSF046J23+          AGAGAAGAAGTGGAAGCTTTAATTAAAGTTCGGACAAATCTGGACTTGCAATACCAAGAC
rJMSF049P17+          AGAGAAGAAGTGGAAGCTTTAATTAAAGTTCGGACAAATCTGGACTTGCAATACCAAGAC
                      ____________________________________________________________
consensus             AGAGAAGAAGTGGAAGCTTTAATTAAAGTTCGGACAAATCTGGACTTGCAATACCAAGAC
 
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rJMSF046J23+          AATGGATCAAAAGGGCCATTGTGGGAGGAGATATCAGCAGGTATGAAGAAGTTTGGATAT
rJMSF049P17+          AATGGATCAAAAGGGCCATTGTGGGAGGAGATATCAGCAGGTATGAAGAAGTTTGGATAT
                      ____________________________________________________________
consensus             AATGGATCAAAAGGGCCATTGTGGGAGGAGATATCAGCAGGTATGAAGAAGTTTGGATAT
 
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rJMSF046J23+          GAGAGAAGTGCAAAAAGGTGTAAAGAGAAGTGGGAGAACATAAACAAGTACTATCGGAGA
rJMSF049P17+          GAGAGAAGTGCAAAAAGGTGTAAAGAGAAGTGGGAGAACATAAACAAGTACTATCGGAGA
                      ____________________________________________________________
consensus             GAGAGAAGTGCAAAAAGGTGTAAAGAGAAGTGGGAGAACATAAACAAGTACTATCGGAGA
 
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rJMSF046J23+          GTAAAAGAAACACAAAAGAAAAGGCCTGAAGATTCAAAGACGTGCCCTTACTTTCACTTG
rJMSF049P17+          GTAAAAGAAACACAAAAGAAAAGGCCTGAAGATTCAAAGACGTGCCCTTACTTTCACTTG
                      ____________________________________________________________
consensus             GTAAAAGAAACACAAAAGAAAAGGCCTGAAGATTCAAAGACGTGCCCTTACTTTCACTTG
 
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rJMSF046J23+          CTAGGTTCTGTGTATCAAAGCAAGTCCAGGAGGGTAGAACATAGAACTTCAGAGGTTCCT
rJMSF049P17+          CTAGATTCTGTGTATCAAAGCAAGTCCAGGAGGGTAGAACATAGAACTTCAGAGGTTCCT
                      ____________________________________________________________
consensus             CTAGGTTCTGTGTATCAAAGCAAGTCCAGGAGGGTAGAACATAGAACTTCAGAGGTTCCT
 
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rJMSF046J23+          AAATCCAAGGGAGAAATGTTGGTGCAAAACCAGGAGGAGGAAGATGGCGAAAGACCAAGT
rJMSF049P17+          AAATCCAAGGGAGAAATGTTGGTGCAAAACCAGGAGGAGGAAGATGGCTAAAGACCAAGT
                      ____________________________________________________________
consensus             AAATCCAAGGGAGAAATGTTGGTGCAAAACCAGGAGGAGGAAGATGGCTAAAGACCAAGT
 
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rJMSF046J23+          GTGGATCAAAATGAAGAAAATGATGATGTGTAGCACCAAATAGTTGGAAATCCCCTCTTG
rJMSF049P17+          GTGGATCAAAATGAAGAAAATGATGATGTGTAGCACCAAATAGTTGGAAATCCCCTCTTG
                      ____________________________________________________________
consensus             GTGGATCAAAATGAAGAAAATGATGATGTGTAGCACCAAATAGTTGGAAATCCCCTCTTG
 
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rJMSF046J23+          CCTGCTGCAGAAAAAAGAATGCAGTGATGCTGCATGATTGCATGAAGTTTTACGCCTAAG
rJMSF049P17+          CCTGCTGCAGAAAAAAGAATGCAGTGATGCTGCATGATTGCATGAAGTTTTACGCCTAAG
                      ____________________________________________________________
consensus             CCTGCTGCAGAAAAAAGAATGCAGTGATGCTGCATGATTGCATGAAGTTTTACGCCTAAG
 
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rJMSF046J23+          AGTTGTGTGAAAGATTACAATTGGTGCACATAAAGCAAAGTGACATCTTTCTTTCTAGTC
rJMSF049P17+          AGTTGTGTGAAAGATTACAATTGGTGCACATAAAGCAAAGTGACATCTTTCTTTCTAGTC
                      ____________________________________________________________
consensus             AGTTGTGTGAAAGATTACAATTGGTGCACATAAAGCAAAGTGACATCTTTCTTTCTAGTC
 
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rJMSF046J23+          TAGTCATATAATAATAATGTATATGAAATCATAGTTTACTGGGTAAATAGAGAGAGAGAC
rJMSF049P17+          TAGTCATATAATAATAATGTATATGAAATCATAGTTTACTGGGTAAATAGAGAGAGAGAC
                      ____________________________________________________________
consensus             TAGTCATATAATAATAATGTATATGAAATCATAGTTTACTGGGTAAATAGAGAGAGAGAC
 
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rJMSF046J23+          AGAAGATTAGCTCAC                                             
rJMSF049P17+          AGAAGATTAGCTCACAAGTAATGATGTGTGTTGTTGTATTAATAAAGACATAAACCATGA
                      ____________________________________________________________
consensus             AGAAGATTAGCTCACAAGTAATGATGTGTGTTGTTGTATTAATAAAGACATAAACCATGA