Contig 012773:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF049P05Sequence664012773 (2)760012773 (2)ref|XP_007206372.1|2e-04hypothetical protein PRUPE_ppa017906mg, partial [Prunus persica] gb|EMJ07571.1|

Alignment

This contig is upended


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JMSF049P05-                             TGAGATCAACTAAATGTTGTATTTCAGAGACATAATAGCAAT
                      ____________________________________________________________
consensus                               TGAGATCAACTAAATGTTGTATTTCAGAGACATAATAGCAAT
 
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JMSF049P05-           GCGAAATCCGATTTAGTCTCTGAACATGAACCCTAGGTTTTGTACTTCATTGTTCGTAAT
                      ____________________________________________________________
consensus             GCGAAATCCGATTTAGTCTCTGAACATGAACCCTAGGTTTTGTACTTCATTGTTCGTAAT
 
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JMSF049P05-           TTCTGTGGATTAAAAGTTCAGTTCTGTCATTTTGGAGTACCGATCATCATCAGTTCATAA
                      ____________________________________________________________
consensus             TTCTGTGGATTAAAAGTTCAGTTCTGTCATTTTGGAGTACCGATCATCATCAGTTCATAA
 
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JMSF049P05-           AATTAAAGTTTGACAATGATCGCACCGTCTGTCGAAAACCCCAACTGAGATAAGTTAACT
                      ____________________________________________________________
consensus             AATTAAAGTTTGACAATGATCGCACCGTCTGTCGAAAACCCCAACTGAGATAAGTTAACT
 
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JMSF049P05-           TATTCCTTCAATTGCTTTCAGTTGATTTACTCTTAATTTAGTTATAGATTTGTCCAAATG
                      ____________________________________________________________
consensus             TATTCCTTCAATTGCTTTCAGTTGATTTACTCTTAATTTAGTTATAGATTTGTCCAAATG
 
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JMSF049P05-           TTTTTGTGTTCGTTAGATTAAGAAATTATTGTTGGTTTATTCGTGTATTTTAATTACGAT
rJMSF049P05+                   TCGTTAGATTAAGAAATTATTGGTGGTTTATTCGTGTATTTTAATTACGAT
                      ____________________________________________________________
consensus             TTTTTGTGTTCGTTAGATTAAGAAATTATTGTTGGTTTATTCGTGTATTTTAATTACGAT
 
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JMSF049P05-           TTTACTAAAAAATTTAGAGGAAATTTTTTTAAAACTTTCTCTGAAGTTTTCCTGTATTTA
rJMSF049P05+          TTTACTAAAAAATTTAGAGGAAATTTTTTTAAAACTTTCTCTGAAGTTTTCCTGTATTTA
                      ____________________________________________________________
consensus             TTTACTAAAAAATTTAGAGGAAATTTTTTTAAAACTTTCTCTGAAGTTTTCCTGTATTTA
 
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JMSF049P05-           GGTAAATATTTATGAAGGATTTAGGATTTGAAAATATTTATTATGCTCTCAGATAGTTTA
rJMSF049P05+          GGTAAATATTTATGAAGGATTTAGGATTTGAAAATATTTATTATGCTCTCAGATAGTTTA
                      ____________________________________________________________
consensus             GGTAAATATTTATGAAGGATTTAGGATTTGAAAATATTTATTATGCTCTCAGATAGTTTA
 
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JMSF049P05-           TGCTCATAATTAATATTATAATTCAACATGCAACTGAAAATAATTAGTTAAATTGAAGTC
rJMSF049P05+          TGCTCATAATTAATATTATAATTCAACATGCAACTGAAAATAATTAGTTAAATTGAAGTC
                      ____________________________________________________________
consensus             TGCTCATAATTAATATTATAATTCAACATGCAACTGAAAATAATTAGTTAAATTGAAGTC
 
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JMSF049P05-           ATTTATTTTATTACAGAGCAGGAATATTAACAAAACTATCATTCTAAGAGGCATTCAAGA
rJMSF049P05+          ATTTATTTTATTACAGAGCAGGAATATTAACAAAACTATCATTCTAAGAGGCATTCAAGA
                      ____________________________________________________________
consensus             ATTTATTTTATTACAGAGCAGGAATATTAACAAAACTATCATTCTAAGAGGCATTCAAGA
 
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JMSF049P05-           ACTGAATAAAAGAACACATGATCAGAGATTGAAGTCATGCGGGGACTTGAAAGTGCTTAT
rJMSF049P05+          ACTGAATAAAAGAACACATGATCAGAGATTGAAGTCATGCGGGGACTTG-AAGTGCTTAT
                      ____________________________________________________________
consensus             ACTGAATAAAAGAACACATGATCAGAGATTGAAGTCATGCGGGGACTTGAAAGTGCTTAT
 
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JMSF049P05-           CAATAGCCCAGAACAAACTTCA                                      
rJMSF049P05+          CAATAGCCCAGAACAAACTTCAGAGTTTGAAAGGAATTGAAGGCTTCAGTAAACTAACTA
                      ____________________________________________________________
consensus             CAATAGCCCAGAACAAACTTCAGAGTTTGAAAGGAATTGAAGGCTTCAGTAAACTAACTA
 
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rJMSF049P05+          TACATACTAAGAAGGCATGTTGAAAGGTATTCACAAATGATGCAGAGAATAGTTTCTATT
                      ____________________________________________________________
consensus             TACATACTAAGAAGGCATGTTGAAAGGTATTCACAAATGATGCAGAGAATAGTTTCTATT
 
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rJMSF049P05+          TAATCTGGCCGTTCAGTTTCTCTAGCAAAGAAGGTTTATATAGAGTTTCAAGTCATTAAT
                      ____________________________________________________________
consensus             TAATCTGGCCGTTCAGTTTCTCTAGCAAAGAAGGTTTATATAGAGTTTCAAGTCATTAAT
 
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rJMSF049P05+          GTCTGTTATTGAAGAATGGAAAGACAACAATCTGTATTGGGAGTATGAAAACCATCATAC
                      ____________________________________________________________
consensus             GTCTGTTATTGAAGAATGGAAAGACAACAATCTGTATTGGGAGTATGAAAACCATCATAC
 
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rJMSF049P05+          TGTTTCAGCACTCTTGTCTTCATTATATTTAGCCTTTATTAAATTTAAATTTAAATTTAA
                      ____________________________________________________________
consensus             TGTTTCAGCACTCTTGTCTTCATTATATTTAGCCTTTATTAAATTTAAATTTAAATTTAA
 
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rJMSF049P05+          ATTAAATTCTGATTCTGATTTGTAATAATATAGGACATGATGGTATTTGAATTAGATTAT
                      ____________________________________________________________
consensus             ATTAAATTCTGATTCTGATTTGTAATAATATAGGACATGATGGTATTTGAATTAGATTAT