Contig 012768:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002K01Sequence442009166 (2)ref|XP_009794004.1|2e-27PREDICTED: protease Do-like 7 [Nicotiana sylvestris]394012768 (2)
JMSF048O02Sequence651009166 (2)emb|CAN65467.1|9e-81hypothetical protein VITISV_040526 [Vitis vinifera]764012768 (2)ref|XP_010062238.1|2e-19PREDICTED: protease Do-like 7 isoform X3 [Eucalyptus grandis]

Alignment

This contig is upended


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rJMSF048O02+                         AACCATGGGCTTGGGTTGTTGGTGATAAGAACACTGTTGCAGTGT
                      ____________________________________________________________
consensus                            AACCATGGGCTTGGGTTGTTGGTGATAAGAACACTGTTGCAGTGT
 
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rJMSF048O02+          CAGCTTCTGATATCTTGCTCTCTTTTGCTGCTTTTCCTATTGAAATCCCTGGGCAGGTAC
                      ____________________________________________________________
consensus             CAGCTTCTGATATCTTGCTCTCTTTTGCTGCTTTTCCTATTGAAATCCCTGGGCAGGTAC
 
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rJMSF048O02+          TGTTGTAAACAATTTAGCTGTAGAAACTTTAATTTTCTGTTGTTAAGCAGCTTAGTTTGC
                      ____________________________________________________________
consensus             TGTTGTAAACAATTTAGCTGTAGAAACTTTAATTTTCTGTTGTTAAGCAGCTTAGTTTGC
 
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rJMSF048O02+          TTAAAAGGTAGTCTTCCTCCATCCGGTGCACAATTTTGCTGTTGTTGCATATGACCCTAA
                      ____________________________________________________________
consensus             TTAAAAGGTAGTCTTCCTCCATCCGGTGCACAATTTTGCTGTTGTTGCATATGACCCTAA
 
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rJMSF048O02+          AGCACTAGGAACTGTTGGTGCTTCTGCCGTTCGCGCCGCTGAGCTTCTTCCTGGTAAACT
                      ____________________________________________________________
consensus             AGCACTAGGAACTGTTGGTGCTTCTGCCGTTCGCGCCGCTGAGCTTCTTCCTGGTAAACT
 
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rJMSF002K01+                                  TTATTCAANNCACAGCTNCATTTCACCNTAATATTC
rJMSF048O02+          TTTGCTTTCCCTATGCATTGGGTCTTATTCAATCCACAGCTCCATTTCACCTTAATATTC
                      ____________________________________________________________
consensus             TTTGCTTTCCCTATGCATTGGGTCTTATTCAATCCACAGCTCCATTTCACCTTAATATTC
 
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rJMSF002K01+          ATTAGCTACTGGAAGNGATTGNCCGGCATTTGGTGANGATNTTGCNCATATATACANCGN
rJMSF048O02+          ATTAGCTACTGGAAGAGATTGGCCGGCATTTGGTGATGATCTTGCACATATATACA-CGT
                      ____________________________________________________________
consensus             ATTAGCTACTGGAAGAGATTGGCCGGCATTTGGTGATGATCTTGCACATATATACANCGT
 
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rJMSF002K01+          ACATACATNTATGNGTATATAACTATATATGCNTGTGTGTGGGGTGCGCATGNGTANTTG
rJMSF048O02+          ACATACATATATGTGTATATAACTATATATGCTTGTGTGTGGGGTGCGCATGTGTATTTG
                      ____________________________________________________________
consensus             ACATACATATATGTGTATATAACTATATATGCTTGTGTGTGGGGTGCGCATGTGTATTTG
 
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rJMSF002K01+          ATTGTGTATATTCTTCTGGCAATNCCNTTCAANTACTTTTTATTAATCTTGGCGTTCNTC
rJMSF048O02+          ATTGTGTATATTCTTCTGGCAATACCATTCAATTACTTTTTATTAATCTTGGCGTTCTTC
                      ____________________________________________________________
consensus             ATTGTGTATATTCTTCTGGCAATACCATTCAATTACTTTTTATTAATCTTGGCGTTCTTC
 
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rJMSF002K01+          AAGTGCGAAAGTTTTTAATTCCCATNTTAATTCTTNNAAAGAAAAAGAAACTTAGACTNA
rJMSF048O02+          AAGTGCGAAAGTTTTTAATTCCCATATTAATTCTTAAAAAGAAAAAGAAACTTAGACTTA
                      ____________________________________________________________
consensus             AAGTGCGAAAGTTTTTAATTCCCATATTAATTCTTAAAAAGAAAAAGAAACTTAGACTTA
 
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rJMSF002K01+          CATATCCCAGGATTTTCTNTCNNNAGGTCAAATCGTAGNGTAAGGNGGAAAAAAATGCNC
rJMSF048O02+          CATATCCCAGGATTTTCTATCTTAAGGTCAAATTGTAGTGTAAGGAGGAAAAAAATGCAC
                      ____________________________________________________________
consensus             CATATCCCAGGATTTTCTATCTTAAGGTCAAATTGTAGTGTAAGGAGGAAAAAAATGCAC
 
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rJMSF002K01+          CGCATCCCGATNAATAATAATGGTAATAAAAATAATCCATAATCNANACCCTAATCGC  
rJMSF048O02+          CGCATCCCGATTAATAATAATGGTAATAAAAATAATCCATAATCTAAACCCTAATCGCTG
                      ____________________________________________________________
consensus             CGCATCCCGATTAATAATAATGGTAATAAAAATAATCCATAATCTAAACCCTAATCGCTG
 
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rJMSF048O02+          TAATTACTGTCTCTAAGAAAAAATGTCCTGCTTCACTTTGTTTTGTTGTCATAAGGTTGC
                      ____________________________________________________________
consensus             TAATTACTGTCTCTAAGAAAAAATGTCCTGCTTCACTTTGTTTTGTTGTCATAAGGTTGC