Contig 012763:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011M10Sequence579010342 (5)ref|XP_009605963.1|1e-58PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Nicotiana tomentos763012763 (5)gb|KHG28215.1|9e-104hypothetical protein F383_15738 [Gossypium arboreum]
JMFF032H13Sequence478010342 (5)ref|XP_009605963.1|2e-39PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Nicotiana tomentos588012763 (5)ref|XP_011088392.1|1e-45PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Sesamum indicum]
JMFF051J12Sequence429010342 (5)ref|XP_009605963.1|9e-30PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Nicotiana tomentos233012763 (5)
JMSF002H10Sequence486010342 (5)ref|XP_009605963.1|4e-46PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Nicotiana tomentos749012763 (5)gb|KHG28215.1|2e-104hypothetical protein F383_15738 [Gossypium arboreum]
JMSF048E04Sequence698010342 (5)ref|XP_009605963.1|6e-77PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Nicotiana tomentos761012763 (5)emb|CDO97055.1|2e-85unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF002H10+                                                      CGACCCCGAGGCGATT
rJMFF011M10+                                                                GCGATT
                      ____________________________________________________________
consensus                                                         CGACCCCGAGGCGATT
 
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rJMSF002H10+          CAGAGGTTGAATTTGCACACTGCTATGACGAATGGGAGGCATCTGCTGTGGTTGGTTGAG
rJMFF011M10+          CAGAGGTTGAATTTGCACACTGCTATGACGAATGGGAGGCATCTGCTGTGGTTGGTTGAG
                      ____________________________________________________________
consensus             CAGAGGTTGAATTTGCACACTGCTATGACGAATGGGAGGCATCTGCTGTGGTTGGTTGAG
 
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rJMSF002H10+          AGGATGATTGAATTGAGGGTGGCTGATACAGCTGTGAAGGAGTGGAGCAATCAGGTTTCA
rJMFF011M10+          AGGATGATTGAATTGAGGGTGGCTGATACAGCTGTGAAGGAGTGGAGCAATCAGGTTTCA
rJMSF048E04+                            GTGGCTGATACAGCTGTGAAGGAGTGGAGCAATCAGGTTTCA
                      ____________________________________________________________
consensus             AGGATGATTGAATTGAGGGTGGCTGATACAGCTGTGAAGGAGTGGAGCAATCAGGTTTCA
 
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rJMSF002H10+          TTTACTGCTGATTTACAGAGAGCATTCCGAGATGATGCCTGGAGGAATTATGTTCCTGGG
rJMFF011M10+          TTTACTGCTGATTTACAGAGAGCATTCCGAGATGATGCCTGGAGGAATTATGTTCCTGGG
rJMSF048E04+          TTTACTGCTGATTTACAGAGAGCATTCCGAGATGATGCCTGGAGGAATTATGTTCCTGGG
                      ____________________________________________________________
consensus             TTTACTGCTGATTTACAGAGAGCATTCCGAGATGATGCCTGGAGGAATTATGTTCCTGGG
 
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rJMSF002H10+          CTTCCTGCCGTTGTGCTTCGATGCACTTGCAAGCTTGCCAATGCTGTCTCAATGGGGACT
rJMFF011M10+          CTTCCTGCCGTTGTGCTTCGATGCACTTGCAAGCTTGCCAATGCTGTCTCAATGGGGACT
rJMSF048E04+          CTTCCTGCCGTTGTGCTTCGATGCACTTGCAAGCTTGCCAATGCTGTCTCAATGGGGACT
                      ____________________________________________________________
consensus             CTTCCTGCCGTTGTGCTTCGATGCACTTGCAAGCTTGCCAATGCTGTCTCAATGGGGACT
 
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rJMSF002H10+          ATCCTGGCTGATAGACAGGTTAGAATGAAGCTCGTGAAAAATTGGCTTCCTGTGCTTATT
rJMFF032H13+                        ACAGGTTAGAATGAAGCTCGTGAAAAATTGGCTTCCTGTGCTTATT
rJMFF011M10+          ATCCTGGCTGATAGACAGGTTAGAATGAAGCTCGTGAAAAATTGGCTTCCTGTGCTTATT
rJMSF048E04+          ATCCTGGCTGATAGACAGGTTAGAATGAAGCTCGTGAAAAATTGGCTTCCTGTGCTTATT
                      ____________________________________________________________
consensus             ATCCTGGCTGATAGACAGGTTAGAATGAAGCTCGTGAAAAATTGGCTTCCTGTGCTTATT
 
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rJMSF002H10+          GCATGCAAAGACAATGTTTCGCCTATGATGCCTAATCACAAACAACTATATCTGGAGCTG
rJMFF032H13+          GCATGCAAAGACAATGTTTCGCCTATGATGCCTAATCACAAACAACTATATCTGGAGCTG
rJMFF011M10+          GCATGCAAAGACAATGTTTCGCCTATGATGCCTAATCACAAACAACTATATCTGGAGCTG
rJMSF048E04+          GCATGCAAAGACAATGTTTCGCCTATGATGCCTAATCACAAACAACTATATCTGGAGCTG
                      ____________________________________________________________
consensus             GCATGCAAAGACAATGTTTCGCCTATGATGCCTAATCACAAACAACTATATCTGGAGCTG
 
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rJMSF002H10+          GAAGAAACATTCTTGAGGATTATATCAACACTTCCGCTCTCTGATGCTCAGGAGTTGTTG
rJMFF032H13+          GAAGAAACATTCTTGAGGATTATATCAACACTTCCGCTCTCTGATGCTCAGGAGTTGTTG
rJMFF011M10+          GAAGAAACATTCTTGAGGATTATATCAACACTTCCGCTCTCTGATGCTCAGGAGTTGTTG
rJMSF048E04+          GAAGAAACATTCTTGAGGATTATATCAACACTTCCGCTCTCTGATGCTCAGGAGTTGTTG
                      ____________________________________________________________
consensus             GAAGAAACATTCTTGAGGATTATATCAACACTTCCGCTCTCTGATGCTCAGGAGTTGTTG
 
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rJMSF002H10+          CAACAGTGTCTTAGCTTCTCAACTCGGAATGTTGAAGACTGTCCTCACTTGATCAGTGCA
rJMFF032H13+          CAACAGTGTCTTAGCTTCTCAACTCGGAATGTTGAAGACTGTCCTCACTTGATCAGTGCA
rJMFF011M10+          CAACAGTGTCTTAGCTTCTCAACTCGGAATGTTGAAGACTGTCCTCACTTGATCAGTGCA
rJMSF048E04+          CAACAGTGTCTTAGCTTCTCAACTCGGAATGTTGAAGACTGTCCTCACTTGATCAGTGCA
                      ____________________________________________________________
consensus             CAACAGTGTCTTAGCTTCTCAACTCGGAATGTTGAAGACTGTCCTCACTTGATCAGTGCA
 
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rJMSF002H10+          TTCACCACCTGGTTCCGCAGAGCAAACAGATCCCATGAGCAGAAAGACTTTGTCTGTAAA
rJMFF032H13+          TTCACCACCTGGTTCCGCAGAGCAAACAGATCCCATGAGCAGAAAGACTTTGTCTGTAAA
rJMFF011M10+          TTCACCACCTGGTTCCGCAGAGCAAACAGATCCCATGAGCAGAAAGACTTTGTCTGTAAA
rJMFF051J12+                                                                 GTAAA
rJMSF048E04+          TTCACCACCTGGTTCCGCAGAGCAAACAGATCCCATGAGCAGAAAGACTTTGTCTGTAAA
                      ____________________________________________________________
consensus             TTCACCACCTGGTTCCGCAGAGCAAACAGATCCCATGAGCAGAAAGACTTTGTCTGTAAA
 
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rJMSF002H10+          AAATTTGGAGACTGGGCAGACTAGCTAACATGGACATAATATCACGTAGTTAACTCTTTT
rJMFF032H13+          AAATTTGGAGACTGGGCAGACTAGCTAACATGGACATAATATCACGTAGTTAACTCTTTT
rJMFF011M10+          AAATTTGGAGACTGGGCAGACTAGCTAACATGGACATAATATCACGTAGTTAACTCTTTT
rJMFF051J12+          AAATTTGGAGACTGGGCAGACTAGCTAACATGGACATAATATCACGTAGTTAACTCTTTT
rJMSF048E04+          AAATTTGGAGACTGGGCAGACTAGCTAACATGGACATAATATCACGTAGTTAACTCTTTT
                      ____________________________________________________________
consensus             AAATTTGGAGACTGGGCAGACTAGCTAACATGGACATAATATCACGTAGTTAACTCTTTT
 
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rJMSF002H10+          CCCTACCAAATCTGTACATAGGCTTTTTAGTTTTCCTTTGGTGTTATACAGGAAGCATGG
rJMFF032H13+          CCCTACCAAATCTGTACATAGGCTTTTTAGTTTTCCTTTGGTGTTATACAGGAAGCATGG
rJMFF011M10+          CCCTACCAAATCTGTACATAGGCTTTTTAGTTTTCCTTTGGTGTTATACAGGAAGCATGG
rJMFF051J12+          CCCTACCAAATCTGTACATAGGCTTTTTAGTTTTCCTTTGGTGTTATACAGGAAGCATGG
rJMSF048E04+          CCCTACCAAATCTGTACATAGGCTTTTTAGTTTTCCTTTGGTGTTATACAGGAAGCATGG
                      ____________________________________________________________
consensus             CCCTACCAAATCTGTACATAGGCTTTTTAGTTTTCCTTTGGTGTTATACAGGAAGCATGG
 
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rJMSF002H10+          TACACAGTGTTCTGTTAGTGTTACCCTGGTGCTATGAAAGTTTCCTTGAAC         
rJMFF032H13+          TACACAGTGTTCTGTTAGTGTTA-CCTGGTGCTATGAAAGTTTCCTTGAACACCACTTGT
rJMFF011M10+          TACACAGTGTTCTGTTAGTGTTA-CCTGGTGCTATGAAAGTTTCCTTGAACACCACTTGT
rJMFF051J12+          TACACAGTGTTCTGTTAGTGTTA-CCTGGTGCTATGAAAGTTTCCTTGAACACCACTTGT
rJMSF048E04+          TACACAGTGTTCTGTTAGTGTTA-CCTGGTGCTATGAAAGTTTCCTTGAACACCACTTGT
                      ____________________________________________________________
consensus             TACACAGTGTTCTGTTAGTGTTA-CCTGGTGCTATGAAAGTTTCCTTGAACACCACTTGT
 
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rJMFF032H13+          GACTCTACTTTGTTTTCAGAGTGGACAATGNTATATAA                      
rJMFF011M10+          GACTCTACTTTGTTTTCAGAGTGGACAATGTTATATAA                      
rJMFF051J12+          GACTTTACTTTGTTTTCAGAGTGGACAATGTTATATAATGATGTGATGT           
rJMSF048E04+          GACTCTACTTTGTTTTCAGAGTGGACAATGTTATATAATGATGTGATGTAGATAAACTGG
                      ____________________________________________________________
consensus             GACTCTACTTTGTTTTCAGAGTGGACAATGTTATATAATGATGTGATGTAGATAAACTGG
 
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rJMSF048E04+          CTCAATCTTCCTTCCCTGTTCCCCAATCTGTTCTTGCTGCTGCCATTATTTAAGCTCATG
                      ____________________________________________________________
consensus             CTCAATCTTCCTTCCCTGTTCCCCAATCTGTTCTTGCTGCTGCCATTATTTAAGCTCATG