Contig 012756:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF040N12Sequence832012756 (3)ref|XP_011070823.1|8e-48PREDICTED: putative late blight resistance protein homolog R1B-17 [Sesamum indi
JMSF047C09Sequence643002005 (4)ref|XP_006362574.1|3e-58PREDICTED: putative late blight resistance protein homolog R1B-12-like [Solanum810012756 (3)ref|XP_011070823.1|1e-41PREDICTED: putative late blight resistance protein homolog R1B-17 [Sesamum indi
JMSF051J19Sequence697002005 (4)ref|XP_006362574.1|9e-66PREDICTED: putative late blight resistance protein homolog R1B-12-like [Solanum803012756 (3)ref|XP_011070823.1|6e-42PREDICTED: putative late blight resistance protein homolog R1B-17 [Sesamum indi

Alignment

This contig is upended


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rJMSF040N12+                                                            TTCAGAAACT
                      ____________________________________________________________
consensus                                                               TTCAGAAACT
 
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rJMSF040N12+          GGGAATTCGTGGGAATTTGTCAGAGCTTCTAGAGAGCAGGGGAGGGAGTTGTTTGTTCGA
rJMSF051J19+                                       TAGAGAGCANGGGAGGGAGTTGTTTGTTCGA
rJMSF047C09+                                       TAGAGAGCAGGGGAGGGAGTTGTTTGTTCGA
                      ____________________________________________________________
consensus             GGGAATTCGTGGGAATTTGTCAGAGCTTCTAGAGAGCAGGGGAGGGAGTTGTTTGTTCGA
 
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rJMSF040N12+          CAATATTCACTCATTGGATCACCTCGAAAACCTAAAATTGTTGCACGATGCCGCCATTGG
rJMSF051J19+          CAATANTCACTCATTGGATCACCTCGAAAACCTAAAATTGTTGCACGATGCCGCCATTGG
rJMSF047C09+          CAATATTCACTCATTGGATCACCTCGAAAACCTAAAATTGTTGCACGATGCCGCCATTGG
                      ____________________________________________________________
consensus             CAATATTCACTCATTGGATCACCTCGAAAACCTAAAATTGTTGCACGATGCCGCCATTGG
 
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rJMSF040N12+          TCAGGCTAGCAAGCTGCGAAGCATTCCTCGTGCTGAGAAGTTCCCTCGCAAGCTAAGGAA
rJMSF051J19+          TCAGGCTAGCAAGCTGCGAAGCATTCCTCGTGCTGAGAAGTTCCCTCGCAAGCTAAGGAA
rJMSF047C09+          TCAGGCTAGCAAGCTGCGAAGCATTCCTCGTGCTGAGAAGTTCCCTCGCAAGCTAAGGAA
                      ____________________________________________________________
consensus             TCAGGCTAGCAAGCTGCGAAGCATTCCTCGTGCTGAGAAGTTCCCTCGCAAGCTAAGGAA
 
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rJMSF040N12+          GTTGACATTGTCGAACACATCGTTTGAGTGGAAGGACATGTATATACTGGGATCTCTCGA
rJMSF051J19+          GTTGACATTGTCGAACACATCGTTTGAGTGGAAGGACATGTATATACTGGGATCTCTCGA
rJMSF047C09+          GTTGACATTGTCGAACACATCGTTTGAGTGGAAGGACATGTATATACTGGGATCTCTCGA
                      ____________________________________________________________
consensus             GTTGACATTGTCGAACACATCGTTTGAGTGGAAGGACATGTATATACTGGGATCTCTCGA
 
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rJMSF040N12+          GGAGCTCGAGATCCTAAAGTTGGAGGAAAACGCCTTTAGGGGCGAGTTTTTGGATCTAAC
rJMSF051J19+          GGAGCTCGAGATCCTAAAGTTGGAGGAAAACGCCTTTAGGGGCGAGTTTTTGGATCTAAC
rJMSF047C09+          GGAGCTCGAGATCCTAAAGTTGGAGGAAAACGCCTTTAGGGGCGAGTTTTTGGATCTAAC
                      ____________________________________________________________
consensus             GGAGCTCGAGATCCTAAAGTTGGAGGAAAACGCCTTTAGGGGCGAGTTTTTGGATCTAAC
 
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rJMSF040N12+          CAATGTTGCTTTTAAGCATTTGCAGCTCTTGCGTATGGGAAGGACAGACTTGGTATCCTG
rJMSF051J19+          CAATGTTGCTTTTAAGCATTTGCAGCTCTTGCGTATGGGAAGGACAGACTTGGTATCCTG
rJMSF047C09+          CAATGTTGCTTTTAAGCATTTGCAGCTCTTGCGTATGGGAAGGACAGACTTGGTATCCTG
                      ____________________________________________________________
consensus             CAATGTTGCTTTTAAGCATTTGCAGCTCTTGCGTATGGGAAGGACAGACTTGGTATCCTG
 
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rJMSF040N12+          GACCGCTTCCAAGAATAGCTTTCCAGTACTAAAACATCTTCACCTGAGACATTGTGCTAA
rJMSF051J19+          GACCGCTTCCAAGAATAGCTTTCCAGTACTAAAACATCTTCACCTGAGACATTGTGCTAA
rJMSF047C09+          GACCGCTTCCAAGAATAGCTTTCCAGTACTAAAACATCTTCACCTGAGACATTGTGCTAA
                      ____________________________________________________________
consensus             GACCGCTTCCAAGAATAGCTTTCCAGTACTAAAACATCTTCACCTGAGACATTGTGCTAA
 
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rJMSF040N12+          TCTCGACGCTGTCCCGCCTTCATTTGCTGAAATCGAAAGCCTCAGAGTGGTCGAGTTGTT
rJMSF051J19+          TCTCGACGCTGTCCCGCCTTCATTTGCTGAAATCGAAAGCCTCAGAGTGGTCGAGTTGTT
rJMSF047C09+          TCTCGACGCTGTCCCGCCTTCATTTGCTGAAATCGAAAGCCTCAGAGTGGTCGAGTTGTT
                      ____________________________________________________________
consensus             TCTCGACGCTGTCCCGCCTTCATTTGCTGAAATCGAAAGCCTCAGAGTGGTCGAGTTGTT
 
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rJMSF040N12+          CTGTACAAACAGTAGGGCAGCTATTTCTGCTCGCGAGATATTTAAACCGAAACAAGAAAA
rJMSF051J19+          CTGTACAAACAGTAGGGCAGCTATTTCTACTCGCGAGATATTTAAACCGAAACAAGAAAA
rJMSF047C09+          CTGTACAAACAGTAGGGCAGCTATTTCTACTCGCGAGATATTTAAACCGAAACAAGAAAA
                      ____________________________________________________________
consensus             CTGTACAAACAGTAGGGCAGCTATTTCTACTCGCGAGATATTTAAACCGAAACAAGAAAA
 
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rJMSF040N12+          GCATAATACAGAGAGGAGCGGTACATTTGTGTTCTCTATCTATCCTCCTGATCAGTAATT
rJMSF051J19+          GCATAATACAGAGAGGAGCGGTACATTTGTGTTCTCTATCTATCCTCCTGATCAGTAATT
rJMSF047C09+          GCATAATACAGAGAGGAGCGGTACATTTGTGTTCTCTATCTATCCTCCTGATCAGTAATT
                      ____________________________________________________________
consensus             GCATAATACAGAGAGGAGCGGTACATTTGTGTTCTCTATCTATCCTCCTGATCAGTAATT
 
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rJMSF040N12+          TCAACTCGGTTGCTCTATCACATTGCTACAAACAGACATTTGTTCTAAGTGGCACAACAA
rJMSF051J19+          TCAACTCGGTTGCTCTATCACATTGCTACAAACAGACATTTGTTCTAAGTGGCACAACAA
rJMSF047C09+          TCAACTCGGTTGCTCTATCACATTGCTACAAACAGACATTTGTTCTAAGTGGCACAACAA
                      ____________________________________________________________
consensus             TCAACTCGGTTGCTCTATCACATTGCTACAAACAGACATTTGTTCTAAGTGGCACAACAA
 
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rJMSF040N12+          ATAAATGGTGGCATGAACAAATCTCATCTGCAATGTTCTTCTGAATGGTTAATGGTGGAG
rJMSF051J19+          ATAAATGGTGGCATGAACAAATCTCATCTGCAATGTTCTTCTGAATGGTTAATGGTGGAG
rJMSF047C09+          ATAAATGGTGGCATGAACAAATCTCATCTGCAATGTTCTTCTGAATGGTTAATGGTGGAG
                      ____________________________________________________________
consensus             ATAAATGGTGGCATGAACAAATCTCATCTGCAATGTTCTTCTGAATGGTTAATGGTGGAG
 
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rJMSF040N12+          TGTTGTGAGAAGATTTCAATGTGTAAATGTTTTCTAACTGTTGACAGAAACAGTTGTGTT
rJMSF051J19+          TGTTGTGAGAAGATTTCAATGTGTAAATGTTTTCTAACTGTTGACAG-AACAGTTGTGTT
rJMSF047C09+          TGTTGTGAGAAGATTTCAATGTGTAAATGTTTTCTAACTGTTGACAG-AACAGTTGTGTT
                      ____________________________________________________________
consensus             TGTTGTGAGAAGATTTCAATGTGTAAATGTTTTCTAACTGTTGACAG-AACAGTTGTGTT
 
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rJMSF040N12+          GTTATTAGTTGA                                                
rJMSF051J19+          GTTATTAGTTGA                                                
rJMSF047C09+          GTTATTAGTTGACAGTTTGGTTTGTTTTTAACTGAGAAATGGAATGTAATGAATTGGCTT
                      ____________________________________________________________
consensus             GTTATTAGTTGACAGTTTGGTTTGTTTTTAACTGAGAAATGGAATGTAATGAATTGGCTT