Contig 012751:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF015I12+                                                             CTTTTGTAC
                      ____________________________________________________________
consensus                                                                CTTTTGTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF015I12+          TCATGCAGATCGTTTATGTCCTTGAATCATCCAGTTGCGTTTCTTCTCTCAAACACCCAT
                      ____________________________________________________________
consensus             TCATGCAGATCGTTTATGTCCTTGAATCATCCAGTTGCGTTTCTTCTCTCAAACACCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF015I12+          TTTCCTCTTTGGTTTGTAGTACTATGTGGGAGCTCCTCTCTAGCACTTCTTCATTACATC
rJMSF046M06+               TCTTTGGTTTGTAGTACTATGTGGGAGCTCCTCTCTAGCACTTCTTCATTACATC
                      ____________________________________________________________
consensus             TTTCCTCTTTGGTTTGTAGTACTATGTGGGAGCTCCTCTCTAGCACTTCTTCATTACATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF015I12+          GTTGAAAAGGAGCCTCCGAAATCCGAGCAAATGCCTTCAATCCTTGCCGCATTCATAATG
rJMSF046M06+          GTTGAAAAGGAGCCTCCGAAATCCGAGCAAATGCCTTCAATCCTTGCCGCATTCATAATG
                      ____________________________________________________________
consensus             GTTGAAAAGGAGCCTCCGAAATCCGAGCAAATGCCTTCAATCCTTGCCGCATTCATAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF015I12+          AGTGTGTTCTGGATATCAACTGCAGCGGGAGAGCTACTCAACTGCCTTGCAGTTCTTGGA
rJMSF046M06+          AGTGTGTTCTGGATATCAACTGCAGCGGGAGAGCTACTCAACTGCCTTGCAGTTCTTGGA
                      ____________________________________________________________
consensus             AGTGTGTTCTGGATATCAACTGCAGCGGGAGAGCTACTCAACTGCCTTGCAGTTCTTGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF015I12+          GTGCTTCTGAAACTCCCCTCTGCTCTTCTCGGTTTGACAGTGCTCGCATGGGGAAAATTC
rJMSF046M06+          GTGCTTCTGAAACTCCCCTCTGCTCTTCTCGGTTTGACAGTGCTCGCATGGGG-AAATTC
                      ____________________________________________________________
consensus             GTGCTTCTGAAACTCCCCTCTGCTCTTCTCGGTTTGACAGTGCTCGCATGGGGAAAATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF015I12+          AGTAGGTGATCTCGTTGCAGATGTTGCCGTTGCAAAGGCAGGTCAGCCCGCCTTGGCCAT
rJMSF046M06+          AGTAGGTGATCTCGTTGCAGATGTTGCCGTTGCAAAGGCAGGTCAGCCCGCCTTGGCCAT
                      ____________________________________________________________
consensus             AGTAGGTGATCTCGTTGCAGATGTTGCCGTTGCAAAGGCAGGTCAGCCCGCCTTGGCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF015I12+          GGCCGGGTGCTTTGCCGGCCCCATGTTCAACATGCTTTTCGGGCTGGGAACGGCTCTGGT
rJMSF046M06+          GGCCGGGTGCTTTGCCGGCCCCATGTTCAACATGCTTTTCGGGCTGGGAACGGCTCTGGT
                      ____________________________________________________________
consensus             GGCCGGGTGCTTTGCCGGCCCCATGTTCAACATGCTTTTCGGGCTGGGAACGGCTCTGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF015I12+          CATACAAACGGGGGACGTTTATCCAGAGGCCTACGAGCTTCATTTCCATGTGAGCATAGT
rJMSF046M06+          CATACAAACGGGGGACGTTTATCCAGAGGCCTACGAGCTTCATTTCCATGTGAGCATAGT
                      ____________________________________________________________
consensus             CATACAAACGGGGGACGTTTATCCAGAGGCCTACGAGCTTCATTTCCATGTGAGCATAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF015I12+          TGTGGCATTCGTTTTCTTGCTCGTTAGCTTGATGGGATCCTTACTTGTAGTAACTTGGCA
rJMSF046M06+          TGTGGCATTCGTTTTCTTGCTCGTTAGCTTGATGGGATCCTTACTTGTAGTAACTTGGCA
                      ____________________________________________________________
consensus             TGTGGCATTCGTTTTCTTGCTCGTTAGCTTGATGGGATCCTTACTTGTAGTAACTTGGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF015I12+          CAGGTTTCAAGTCCCCAGATTCTGGGGATTCTGCCTTGTTGGACTTTACTCCTTGTTCAT
rJMSF046M06+          CAGGTTTCAAGTCCCCAGATTCTGGGGATTCTGCCTTGTTGGACTTTACTCCTTGTTCAT
                      ____________________________________________________________
consensus             CAGGTTTCAAGTCCCCAGATTCTGGGGATTCTGCCTTGTTGGACTTTACTCCTTGTTCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF015I12+          GTTAGTGAGCCTGGTAATTGCAAAGTTTTCTGCATAATGTTTAGGCAGAGGGAACTTGAT
rJMSF046M06+          GTTAGTGAGCCTGGTAATTGCAAAGTTTTCTGCATAATGTTTAGGCAGAGGGAACTTGAT
                      ____________________________________________________________
consensus             GTTAGTGAGCCTGGTAATTGCAAAGTTTTCTGCATAATGTTTAGGCAGAGGGAACTTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF015I12+          GTCATGGCAGTTGCATTATCATACATTCTTTTAGCACATTTTTATTGTAAATAT      
rJMSF046M06+          GTCATGGCAGTTGCATTATCATACATTCTTTTAGCACATTTTTATTGTAAATATTCTAAG
                      ____________________________________________________________
consensus             GTCATGGCAGTTGCATTATCATACATTCTTTTAGCACATTTTTATTGTAAATATTCTAAG