Contig 012750:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF014O08+                                                                  CNTT
                      ____________________________________________________________
consensus                                                                     CNTT
 
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rJMSF014O08+          CGNTACACAACCCGCTGATTTTGGCTACTTCATATCATAGACTTGCATCCAAAGATGGGA
rJMSF046H13+                                                                     A
                      ____________________________________________________________
consensus             CGNTACACAACCCGCTGATTTTGGCTACTTCATATCATAGACTTGCATCCAAAGATGGGA
 
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rJMSF014O08+          AGACTGATTTGTGATTGCCTGAATGACC-TATACTTCAAGTTTGGTAAAGAATCTAGCCT
rJMSF046H13+          AGACTGATTTGTGATTGCCTGAATGACCNTATACTTCAAGTTTGGTAAAGAATCTAGCCT
                      ____________________________________________________________
consensus             AGACTGATTTGTGATTGCCTGAATGACCNTATACTTCAAGTTTGGTAAAGAATCTAGCCT
 
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rJMSF014O08+          TTTGAAAAAGGTTGTTCAGAAGCCAACAGGTCAGCA-TTAAGCTTGTGACTTTACTCTCT
rJMSF046H13+          TTTGAAAAAGGTTGTTCAGAAGCCAACAGGTCAGCATTTAAGCTTGTGACTTTACTCTCT
                      ____________________________________________________________
consensus             TTTGAAAAAGGTTGTTCAGAAGCCAACAGGTCAGCATTTAAGCTTGTGACTTTACTCTCT
 
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rJMSF014O08+          AGTAGTATTTTCACTTGGTGGTGCATATTTCTTATTTTATACTTGCTTTCAACTGTTTGA
rJMSF046H13+          AGTAGTATTTTCACTTGGTGGTGCATATTTCTTATTTTATACTTGCTTTCAACTGTTTGA
                      ____________________________________________________________
consensus             AGTAGTATTTTCACTTGGTGGTGCATATTTCTTATTTTATACTTGCTTTCAACTGTTTGA
 
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rJMSF014O08+          GGCCTGGGAAGTTGAGAAGAAGATTAGTCCTTGTAATGACGGAAAGATGTTTCACATATA
rJMSF046H13+          GGCCTGGGAAGTTGAGAAGAAGATTAGTCCTTGTAATGATGGAAAGATGTTTCACATATA
                      ____________________________________________________________
consensus             GGCCTGGGAAGTTGAGAAGAAGATTAGTCCTTGTAATGATGGAAAGATGTTTCACATATA
 
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rJMSF014O08+          CTAATCAACAGACATGAAAGGGGTTGGAACTATCGATGGTTAGGTTCACTTGACATTGAG
rJMSF046H13+          CTAATCAACAGACATGAAAGGGGTTGGAACTATCGATGGTTAGGTTCACTTGACATTGAG
                      ____________________________________________________________
consensus             CTAATCAACAGACATGAAAGGGGTTGGAACTATCGATGGTTAGGTTCACTTGACATTGAG
 
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rJMSF014O08+          GTTACAAAGGACTTCTGAAATTGTGCTTATTCCTTTTCAATTTGTACTGTTTTTGAGTCT
rJMSF046H13+          GTTACAAAGGACTTCTGAAATTGTGCTTATTCCTTTTCAATTTGTACTGTTTTTGAGTCT
                      ____________________________________________________________
consensus             GTTACAAAGGACTTCTGAAATTGTGCTTATTCCTTTTCAATTTGTACTGTTTTTGAGTCT
 
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rJMSF014O08+          TGAGGAAGAGGAAACAACTTGCAAATGACTTTGTATACACTGATTTCAACCATAATCCTT
rJMSF046H13+          TGAGGAAGAGGAAACAACTTGCAAATGACTTTGTATACACTGATTTCAACCATAATCCTT
                      ____________________________________________________________
consensus             TGAGGAAGAGGAAACAACTTGCAAATGACTTTGTATACACTGATTTCAACCATAATCCTT
 
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rJMSF014O08+          CTGACAAAAGATTTCCCAGGCGAAAGAAGCTGAAGTTGAGGCTCAATAAGGTTTTATGCA
rJMSF046H13+          CTGACAAAAGATTTCCCAGGCGAAAGAAGCTGAAGTTGAGGCTCAATAAGGTTTTATGCA
                      ____________________________________________________________
consensus             CTGACAAAAGATTTCCCAGGCGAAAGAAGCTGAAGTTGAGGCTCAATAAGGTTTTATGCA
 
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rJMSF014O08+          GGATGCTAAAGAGGGTTGGATTTCATCTGCTGTTATCTGGTCATGCCGAGAACCGGGACA
rJMSF046H13+          GGATGCTAAAGAGGGTTGGATTTCATCTGCTGTTATCTGGTCATGCCGAGAACCGGGACA
                      ____________________________________________________________
consensus             GGATGCTAAAGAGGGTTGGATTTCATCTGCTGTTATCTGGTCATGCCGAGAACCGGGACA
 
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rJMSF014O08+          CATTGCTACACATCAGTTATGGCAAAAATGGGTTCTAGAGAAACCACTTTGTCATTTTGA
rJMSF046H13+          CATTGCTACACATCAGTTATGGCAAAAATGGGTTCTAGAGAAACCACTTTGTCATTTTGA
                      ____________________________________________________________
consensus             CATTGCTACACATCAGTTATGGCAAAAATGGGTTCTAGAGAAACCACTTTGTCATTTTGA
 
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rJMSF014O08+          TAGAGATTGTTTAGGTACTATACAAACTCAAGCCAAAATTGATGAGATTGAAAACTCTTC
rJMSF046H13+          TAGAGATTGTTTAGGTACTATACAAACTCAAGCCAAAATTGATGAGATTGAAAACTCTTC
                      ____________________________________________________________
consensus             TAGAGATTGTTTAGGTACTATACAAACTCAAGCCAAAATTGATGAGATTGAAAACTCTTC
 
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rJMSF014O08+          ATACTATATATAGCATGTTAAATATGATGTCTGCTGTGAAAAGTT               
rJMSF046H13+          ATACTATATATAGCATGTTAAATATGATGTCTGCTGTGAAAAGTTTGGATGGATAGATAT
                      ____________________________________________________________
consensus             ATACTATATATAGCATGTTAAATATGATGTCTGCTGTGAAAAGTTTGGATGGATAGATAT