Contig 012747:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF045M23Sequence746012747 (2)ref|XP_009762074.1|307PREDICTED: uncharacterized protein LOC104214139 [Nicotiana sylvestris]666012747 (2)ref|XP_011096942.1|358PREDICTED: uncharacterized protein LOC105175988 [Sesamum indicum]

Alignment

This contig is upended


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JMSF045M23-                          GTGCGCAATATAGCAATTATCAGTTCATTGGTAGGGACGATATAC
                      ____________________________________________________________
consensus                            GTGCGCAATATAGCAATTATCAGTTCATTGGTAGGGACGATATAC
 
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JMSF045M23-           CATACAAAAGCTCAGCAGCGTTGCTTCTCATCCTCTTCTCGGCTAGTCGCCTACCGGTAC
                      ____________________________________________________________
consensus             CATACAAAAGCTCAGCAGCGTTGCTTCTCATCCTCTTCTCGGCTAGTCGCCTACCGGTAC
 
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JMSF045M23-           CGCCAAGCCCCGTTTGGGGAGACACGAGGAGAATTCTCATGGCGGCAACTCTACTCTCCA
                      ____________________________________________________________
consensus             CGCCAAGCCCCGTTTGGGGAGACACGAGGAGAATTCTCATGGCGGCAACTCTACTCTCCA
 
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JMSF045M23-           AGCCTACGCTTTCCTCTATCTTCCTCGGCCAGCAATTATGGAATAGAGGAAATTCGAAGA
                      ____________________________________________________________
consensus             AGCCTACGCTTTCCTCTATCTTCCTCGGCCAGCAATTATGGAATAGAGGAAATTCGAAGA
 
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JMSF045M23-           GTTCCCCGCAGTGTGGGTGGATTCCCTCGAAGAGGTCTCAGTCGCGTGGGTTGAGCCTCA
                      ____________________________________________________________
consensus             GTTCCCCGCAGTGTGGGTGGATTCCCTCGAAGAGGTCTCAGTCGCGTGGGTTGAGCCTCA
 
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JMSF045M23-           TGGTCCCGAGGTGTGCGGTCGATACAGCTTTTGGAGGCAACATTCCTAAATTTTCTCGGG
rJMSF045M23+                                                                CTCGGG
                      ____________________________________________________________
consensus             TGGTCCCGAGGTGTGCGGTCGATACAGCTTTTGGAGGCAACATTCCTAAATTTTCTCGGG
 
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JMSF045M23-           TTAATGTTTGGGATCCTTATAAGCGCCTTGGTATAACTCGTGATGCTTCTGAGGAAGAAG
rJMSF045M23+          TTAATGTTTGGGATCCTTATAAGCGCCTTGGTATAACTCGTGATGCTTCTGAGGAAGAAG
                      ____________________________________________________________
consensus             TTAATGTTTGGGATCCTTATAAGCGCCTTGGTATAACTCGTGATGCTTCTGAGGAAGAAG
 
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JMSF045M23-           TGTGGGGTGCTCGCAATTTTTTGTTAGATCAATATTCTGGTCATGAGAGAAGTATGGAAT
rJMSF045M23+          TGTGGGGTGCTCGCAATTTTTTGTTAGATCAATATTCTGGTCATGAGAGAAGTATGGAAT
                      ____________________________________________________________
consensus             TGTGGGGTGCTCGCAATTTTTTGTTAGATCAATATTCTGGTCATGAGAGAAGTATGGAAT
 
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JMSF045M23-           CCATAGAAGCTGCTTTTGAAAAAATACTGATGGCAAGCTACCAGAATAGAAAGAAGACAA
rJMSF045M23+          CCATAGAAGCTGCTTTTGAAAAAATACTGATGGCAAGCTACCAGAATAGAAAGAAGACAA
                      ____________________________________________________________
consensus             CCATAGAAGCTGCTTTTGAAAAAATACTGATGGCAAGCTACCAGAATAGAAAGAAGACAA
 
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JMSF045M23-           AGATTAACTTGAAGACAAGACTAAAAAAGAAAGTCGAAGAGTCTCCACCATGGGTCAAGA
rJMSF045M23+          AGATTAACTTGAAGACAAGACTAAAAAAGAAAGTCGAAGAGTCTCCACCATGGGTCAAGA
                      ____________________________________________________________
consensus             AGATTAACTTGAAGACAAGACTAAAAAAGAAAGTCGAAGAGTCTCCACCATGGGTCAAGA
 
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JMSF045M23-           ACCTGCTCAGTTTTGTGGAAATGCCTCCTGGTGTTATTATTTTAAGAAGATTATTCCTGT
rJMSF045M23+          ACCTGCTCAGTTTTGTGGAAATGCCTCCTGGTGTTATTATTTTAAGAAGATTATTCCTGT
                      ____________________________________________________________
consensus             ACCTGCTCAGTTTTGTGGAAATGCCTCCTGGTGTTATTATTTTAAGAAGATTATTCCTGT
 
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JMSF045M23-           TTGGATTCATGGCAGTCTGGAGTGTAATGAATGCTGCTGAAGCTGGACCTGCTTTCCAGG
rJMSF045M23+          TTGGATTCATGGCAGTCTGGAGTGTAATGAATGCTGCTGAAGCTGGACCTGCTTTCCAGG
                      ____________________________________________________________
consensus             TTGGATTCATGGCAGTCTGGAGTGTAATGAATGCTGCTGAAGCTGGACCTGCTTTCCAGG
 
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JMSF045M23-           TAGCATTATCTTTGGCAGCTTGCATATACTTCCTCAACGAC                   
rJMSF045M23+          TAGCATTATCTTTGGCAGCTTGCATATACTTCCTCAACGACAAGACAAAGAGCCTAGCTA
                      ____________________________________________________________
consensus             TAGCATTATCTTTGGCAGCTTGCATATACTTCCTCAACGACAAGACAAAGAGCCTAGCTA
 
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rJMSF045M23+          GAGCTGCCATCATCGGATTCGGTGCCCTCGTAGTTGGCTGGATTTCTGGTTCCATTTTGG
                      ____________________________________________________________
consensus             GAGCTGCCATCATCGGATTCGGTGCCCTCGTAGTTGGCTGGATTTCTGGTTCCATTTTGG
 
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rJMSF045M23+          TTCCCACAATTCCATCATTTCTGCTACAACCAACTTGGACACTTGAACTGCTAACATCAC
                      ____________________________________________________________
consensus             TTCCCACAATTCCATCATTTCTGCTACAACCAACTTGGACACTTGAACTGCTAACATCAC
 
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rJMSF045M23+          TGGTAGCTTACGTTTTTCTGTTTCTTGCTTGCACTTTCCTCAAGTAACATAAGAGCCAAA
                      ____________________________________________________________
consensus             TGGTAGCTTACGTTTTTCTGTTTCTTGCTTGCACTTTCCTCAAGTAACATAAGAGCCAAA
 
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rJMSF045M23+          CCTCCTGTCGTATTATGAGTTACTAGTTTCAGTTTACAACCAATGTATTTGTTCTTGCAT
                      ____________________________________________________________
consensus             CCTCCTGTCGTATTATGAGTTACTAGTTTCAGTTTACAACCAATGTATTTGTTCTTGCAT