Contig 012744:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF008N16-                                        GATGGGCGTATAAAAAACTGTGCATTGCGTG
                      ____________________________________________________________
consensus                                          GATGGGCGTATAAAAAACTGTGCATTGCGTG
 
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JMSF008N16-           GTTAATGGTAATGGTGCTTCATCACGGGATTGCTGTGGCGATGATGGCGAAACCTCCGAT
JMSF045G05-                     ATGGTGCTTCATCACGGGATTGCTGTGGCGATGATGGCGAAACCTCCGAT
                      ____________________________________________________________
consensus             GTTAATGGTAATGGTGCTTCATCACGGGATTGCTGTGGCGATGATGGCGAAACCTCCGAT
 
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JMSF008N16-           TATCAGAGCGGAGCAACCAGTGGCTCCTCAAGATCTAACTTCCGGCCGTACCTTTCTTCG
JMSF045G05-           TATCAGAGCGGAGCAACCAGTGGCTCCTCAAGATCTAACTTCCGGCCGTACCTTTCTTCG
                      ____________________________________________________________
consensus             TATCAGAGCGGAGCAACCAGTGGCTCCTCAAGATCTAACTTCCGGCCGTACCTTTCTTCG
 
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JMSF008N16-           CGGCGCTAACTCCCCTCCCCGCCGCGATCTCGTCTTCGTCGTCAATCCACGAGGAGCT  
JMSF045G05-           CGGCGCTAACTCCCCTCCCCGCCGCGATCTCGTCTTCGTCGTCAATCCACGAGGAGCTAA
                      ____________________________________________________________
consensus             CGGCGCTAACTCCCCTCCCCGCCGCGATCTCGTCTTCGTCGTCAATCCACGAGGAGCTAA
 
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JMSF045G05-           CGGAAAGACCGGTGAGCAATGGAAGAAGCTGCTACCTTACCTCAGGTCTAGACTCTGTAG
                      ____________________________________________________________
consensus             CGGAAAGACCGGTGAGCAATGGAAGAAGCTGCTACCTTACCTCAGGTCTAGACTCTGTAG
 
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JMSF045G05-           TGATTATAACATATGCGAATCTTTGACTTCAGGTCCCTATCATGCCATTGACATAACAAG
                      ____________________________________________________________
consensus             TGATTATAACATATGCGAATCTTTGACTTCAGGTCCCTATCATGCCATTGACATAACAAG
 
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JMSF045G05-           AGAGGCTATACACCAGGGAGCTGATGCTGTGATTGCAGTTGGTGGTGATGGAACTCTGCA
                      ____________________________________________________________
consensus             AGAGGCTATACACCAGGGAGCTGATGCTGTGATTGCAGTTGGTGGTGATGGAACTCTGCA
 
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JMSF045G05-           CGAGGTTGTGAATGGCTTCTTTTTGGGTGGTGAACCTGTTTCCGATCATGATCCCAAGTC
                      ____________________________________________________________
consensus             CGAGGTTGTGAATGGCTTCTTTTTGGGTGGTGAACCTGTTTCCGATCATGATCCCAAGTC
 
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JMSF045G05-           TATCCATTCAACTGCTCTGGGTCTCATCCCTCTAGGAACTGGATCAGACTTTGCCAGAAC
                      ____________________________________________________________
consensus             TATCCATTCAACTGCTCTGGGTCTCATCCCTCTAGGAACTGGATCAGACTTTGCCAGAAC
 
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JMSF045G05-           ATTTGGCTGGAAAAATGATCCTCATGATGCCATAGAACGGATTGCTAAAGGGATAAAATG
                      ____________________________________________________________
consensus             ATTTGGCTGGAAAAATGATCCTCATGATGCCATAGAACGGATTGCTAAAGGGATAAAATG
 
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JMSF045G05-           TAGGGTTGATGTTGGAGTTATAAGTGGAGTCATTGGAGAACCACATTACTTCATCAATGT
rJMSF008N16+                                                              ATCAATGT
rJMSF045G05+                                   GGAGTCATGGGAGAACCACATTACTTCATCAATGT
                      ____________________________________________________________
consensus             TAGGGTTGATGTTGGAGTTATAAGTGGAGTCATTGGAGAACCACATTACTTCATCAATGT
 
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JMSF045G05-           TGCTGATATTCATTTAAGTGCAAAGGCAGGTTATCATGCATCAAAATACAAGAAATTTGG
rJMSF008N16+          TGCTGATATTCATTTAAGTGCAAAGGCAGGTTATCATGCATCAAAATACAAGAAATTTGG
rJMSF045G05+          TGCTGATATTCATTTAAGTGCAAAGGCAGGTTATCATGCATCAAAATACAAGAAATTTGG
                      ____________________________________________________________
consensus             TGCTGATATTCATTTAAGTGCAAAGGCAGGTTATCATGCATCAAAATACAAGAAATTTGG
 
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JMSF045G05-           AAATTTATGTTATGTTATTGGTGCTTTGCAAGCTTTTTTTGGACACCATAACCAGGATCT
rJMSF008N16+          AAATTTATGTTATGTTATTGGTGCTTTGCAAGCTTTTTTTGGACACCATAACCAGGATCT
rJMSF045G05+          AAATTTATGTTATGTTATTGGTGCTTTGCAAGCTTTTTTTGGACACCATAACCAGGATCT
                      ____________________________________________________________
consensus             AAATTTATGTTATGTTATTGGTGCTTTGCAAGCTTTTTTTGGACACCATAACCAGGATCT
 
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JMSF045G05-           TAGGATCAAGGTTGATGATGGTGAGTGGGAAGTATATTCTCAAGTAACTGCTTTATGCAT
rJMSF008N16+          TAGGATCAAGGTTGATGATGGTGAGTGGGAAGTATATTCTCAAGTAACTGCTTTATGCAT
rJMSF045G05+          TAGGATCAAGGTTGATGATGGTGAGTGGGAAGTATATTCTCAAGTAACTGCTTTATGCAT
                      ____________________________________________________________
consensus             TAGGATCAAGGTTGATGATGGTGAGTGGGAAGTATATTCTCAAGTAACTGCTTTATGCAT
 
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rJMSF008N16+          TGGGAATGCAAAGTACTTTGGTGGTGGAATGAAAATCACACCAAACGGCAACCCATCAAG
rJMSF045G05+          TGGGAATGCAAAGTACTTTGGTGGTGGAATGAAAATCACACCAAACGGCAACCCATCAAG
                      ____________________________________________________________
consensus             TGGGAATGCAAAGTACTTTGGTGGTGGAATGAAAATCACACCAAACGGCAACCCATCAAG
 
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rJMSF008N16+          TGGTAGCTTTGAGGTCGTTATTCTTCAAGATTTTAAGTGGTATGATTTCATTTTCAAACT
rJMSF045G05+          TGGTAGCTTTGAGGTCGTTATTCTTCAAGATTTTAAGTGGTATGATTTCATTTTCAAACT
                      ____________________________________________________________
consensus             TGGTAGCTTTGAGGTCGTTATTCTTCAAGATTTTAAGTGGTATGATTTCATTTTCAAACT
 
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rJMSF008N16+          TCACAAGCTGTACAATGGAACACACCTATCAGTGAAAAATGTAATTTCAAGAAGTGCATG
rJMSF045G05+          TCACAAGCTGTACAATGGAACACACCTATCAGTGAAAAATGTAATTTCAAGAAGTGCATG
                      ____________________________________________________________
consensus             TCACAAGCTGTACAATGGAACACACCTATCAGTGAAAAATGTAATTTCAAGAAGTGCATG
 
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rJMSF008N16+          TTCAATCGAAGTCGAGGAGCTTGGCAACAAAGGCAATGTTTATGTCCAGTCTGATGGTGA
rJMSF045G05+          TTCAATCGAAGTCGAGGAGCTTGGCAACAAAGGCAATGTTTATGTCCAGTCTGATGGTGA
                      ____________________________________________________________
consensus             TTCAATCGAAGTCGAGGAGCTTGGCAACAAAGGCAATGTTTATGTCCAGTCTGATGGTGA
 
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rJMSF008N16+          ATTTTTGGGGTTCCTACCCAGGAAATTTCACATATTACCTGGTGTCATCGAAATGATATG
rJMSF045G05+          ATTTTTGGGGTTCCTACCCAGGAAATTTCACATATTACCTGGTGTCATCGAAATGATATG
                      ____________________________________________________________
consensus             ATTTTTGGGGTTCCTACCCAGGAAATTTCACATATTACCTGGTGTCATCGAAATGATATG
 
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rJMSF008N16+          CTAATACCAGGCTGAGACGACACTTGTGCCTTTTGATGAAACACACTTGATTTTCAGAGA
rJMSF045G05+          CTAATACCAGGCTGAGACGACACTTGTGCCTTTTGATGAAACACACTTGATTTTCAGAGA
                      ____________________________________________________________
consensus             CTAATACCAGGCTGAGACGACACTTGTGCCTTTTGATGAAACACACTTGATTTTCAGAGA
 
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rJMSF008N16+          ATCACCAGCTCGTTTCTGGACTCCATCTTAGTTGAGGTCGTTGCAGTGCCCTGAACACCT
rJMSF045G05+          ATCACCAGCTCGTTTCTGGACTCCATCTTAGTTGAGGTCGTTGCAGTGCCCTGAACACCT
                      ____________________________________________________________
consensus             ATCACCAGCTCGTTTCTGGACTCCATCTTAGTTGAGGTCGTTGCAGTGCCCTGAACACCT
 
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rJMSF008N16+          TGAAAATTACTAACCGGGAATGTAAACAAGAGCTTTTGTAGTTCAGAGTGATATAGACAA
rJMSF045G05+          TGAAAATTACTAACCGGGAATGTAAACAAGAGCTTTTGTAGTTCAGAGTGATATAGACAA
                      ____________________________________________________________
consensus             TGAAAATTACTAACCGGGAATGTAAACAAGAGCTTTTGTAGTTCAGAGTGATATAGACAA
 
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rJMSF008N16+          TAGGTTAGGAAAAGTAATTATTGCATTATGCCCGTGCATGTTTGATGTTGTTACAGAAAG
rJMSF045G05+          TAGGTTAGGAAAAGTAATTATTGCATTATGCCCGTGCATGTTTGATGTTGTTACAGAAAG
                      ____________________________________________________________
consensus             TAGGTTAGGAAAAGTAATTATTGCATTATGCCCGTGCATGTTTGATGTTGTTACAGAAAG
 
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rJMSF008N16+          ATTGTAGTATCATTTAGAAAAGACATTTAAGGTTGTAGTTTTGTGTATGCTTC       
rJMSF045G05+          ATTGTAGTATCATTTAGAAAAGACATTTAAGGTTGTAGTTTTGTGTATGCTTCTGAAATG
                      ____________________________________________________________
consensus             ATTGTAGTATCATTTAGAAAAGACATTTAAGGTTGTAGTTTTGTGTATGCTTCTGAAATG