Contig 012743:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF045C22Sequence729020096emb|CDP20760.1|1e-56unnamed protein product [Coffea canephora]761012743 (2)ref|XP_007138441.1|9e-49hypothetical protein PHAVU_009G209200g [Phaseolus vulgaris] gb|ESW10435.1| hypot
JMSF049B21Sequence686016890emb|CDP20760.1|8e-41unnamed protein product [Coffea canephora]698012743 (2)emb|CDP04890.1|1e-81unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF049B21+                                          CATCCAAAGTTGAAAAGCTTTCCAAAAT
                      ____________________________________________________________
consensus                                             CATCCAAAGTTGAAAAGCTTTCCAAAAT
 
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rJMSF049B21+          CCCTTATAGAGACCTGCATCAAGCTACTGATGGTTTCTCTGACACAAATTTGATCGGTTC
                      ____________________________________________________________
consensus             CCCTTATAGAGACCTGCATCAAGCTACTGATGGTTTCTCTGACACAAATTTGATCGGTTC
 
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rJMSF049B21+          GGGAAGTTTTGGCTCTGTTTACAAAGGAAGATTTGATGAGCAAGGTGGAGGAGAACAAAC
                      ____________________________________________________________
consensus             GGGAAGTTTTGGCTCTGTTTACAAAGGAAGATTTGATGAGCAAGGTGGAGGAGAACAAAC
 
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rJMSF049B21+          AATTGCAGTGAAGGTACTTGACCTTTTAAAAAATGGAGCTTCAAAGAGCTTTCTTGCAGA
                      ____________________________________________________________
consensus             AATTGCAGTGAAGGTACTTGACCTTTTAAAAAATGGAGCTTCAAAGAGCTTTCTTGCAGA
 
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rJMSF049B21+          ATGTAAAGTGTTGAGGAACATACGTCACAGAAATCTTGTTCCAATTTTGACATGCTGCTC
                      ____________________________________________________________
consensus             ATGTAAAGTGTTGAGGAACATACGTCACAGAAATCTTGTTCCAATTTTGACATGCTGCTC
 
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rJMSF049B21+          GAGTTGTGATTTTGTAGGTAATGAATTCAAGGCTTTGGTTTATGAGTTCATGGAAAATGG
                      ____________________________________________________________
consensus             GAGTTGTGATTTTGTAGGTAATGAATTCAAGGCTTTGGTTTATGAGTTCATGGAAAATGG
 
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rJMSF049B21+          GGATTTGGATATGTGGTTGCATGCACATTCATCTAATGCTAGGACAACCGTTCTAAGTGT
                      ____________________________________________________________
consensus             GGATTTGGATATGTGGTTGCATGCACATTCATCTAATGCTAGGACAACCGTTCTAAGTGT
 
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rJMSF049B21+          TCTTCAAAGGTTCAACATTGCAATTGATGTAGCTTCTGCATTGCATTATCTCCATGATGA
rJMSF045C22+                       AACATTGCAATTGATGTAGCTTCTGCATTGCATTATCTCTATGATGA
                      ____________________________________________________________
consensus             TCTTCAAAGGTTCAACATTGCAATTGATGTAGCTTCTGCATTGCATTATCTCTATGATGA
 
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rJMSF049B21+          TTGTGAGCCGGCGGTTATTCATTGTGATCTAAAGCCAAGTAACATTCTGCTTGACAAAGA
rJMSF045C22+          TTGTGAGCCGACGGTTATTCATTGTGATCTAAAACCAAGTAACATTCTGCTTGACAAAGA
                      ____________________________________________________________
consensus             TTGTGAGCCGGCGGTTATTCATTGTGATCTAAAGCCAAGTAACATTCTGCTTGACAAAGA
 
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rJMSF049B21+          C-TTAATTGCTCATGTTGGAGACTTTGGTATATCAAGACTTTATTCACGTACAATTGGAG
rJMSF045C22+          CTTTAACTGCTCATGTTGGAGACTTTGGTATATCAAGACTTTATTCGC---------GAG
                      ____________________________________________________________
consensus             CTTTAATTGCTCATGTTGGAGACTTTGGTATATCAAGACTTTATTCGCGTACAATTGGAG
 
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rJMSF049B21+          ATCCAATTGGTGAACAAAGTAGTACCATTGAATTAAAGGGGTCAATTGGTTATGTTCCAC
rJMSF045C22+          ATCCAATTGGTGAACAAAGTACTACCATTGGATTAAAGGGGTCAATTGGTTATGTTCCAC
                      ____________________________________________________________
consensus             ATCCAATTGGTGAACAAAGTAGTACCATTGGATTAAAGGGGTCAATTGGTTATGTTCCAC
 
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rJMSF049B21+          CAG                                                         
rJMSF045C22+          CAGAGTACGGGATAGGAGCAAAGGCATCAGCTTTTGGAGATGTATATAGCTTTGGAATCC
                      ____________________________________________________________
consensus             CAGAGTACGGGATAGGAGCAAAGGCATCAGCTTTTGGAGATGTATATAGCTTTGGAATCC
 
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rJMSF045C22+          TTTTGTTAGAAATGTTCACAGCTAAAACACCCACAAATGCTTTATTCATGAATGGTGAAT
                      ____________________________________________________________
consensus             TTTTGTTAGAAATGTTCACAGCTAAAACACCCACAAATGCTTTATTCATGAATGGTGAAT
 
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rJMSF045C22+          GTAAGAGTCTCTATGAGTATGTTGAGGCAGCATTATTGGAGCAAGTGACGAAAATTGTTG
                      ____________________________________________________________
consensus             GTAAGAGTCTCTATGAGTATGTTGAGGCAGCATTATTGGAGCAAGTGACGAAAATTGTTG
 
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rJMSF045C22+          ACCCATTGCTTCTAGCATGCCTAGAAAGCAACCTTGGAATAAGACAAAATGAAGAGTTGG
                      ____________________________________________________________
consensus             ACCCATTGCTTCTAGCATGCCTAGAAAGCAACCTTGGAATAAGACAAAATGAAGAGTTGG
 
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rJMSF045C22+          AGAATCAGGACAATTTGGTGAAAATTGAAGAGAGCAAGGTGCATAACTTTTTCCTCTCCA
                      ____________________________________________________________
consensus             AGAATCAGGACAATTTGGTGAAAATTGAAGAGAGCAAGGTGCATAACTTTTTCCTCTCCA
 
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rJMSF045C22+          TCTTTAAAATTGGACTCACTTGTGCTTCAACATCACCAATGGATCGCATGCATATGAATG
                      ____________________________________________________________
consensus             TCTTTAAAATTGGACTCACTTGTGCTTCAACATCACCAATGGATCGCATGCATATGAATG
 
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rJMSF045C22+          AAGTGAGCAGGGAATTACACAAGATAAAGAAGGCCTTCTTTGCATAAAATTAAACAAACA
                      ____________________________________________________________
consensus             AAGTGAGCAGGGAATTACACAAGATAAAGAAGGCCTTCTTTGCATAAAATTAAACAAACA
 
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rJMSF045C22+          TGTCTTGTGACATACAATATTTCCATGGGTGAACTAGCTAGTAATTAATAAAAGCTTGTT
                      ____________________________________________________________
consensus             TGTCTTGTGACATACAATATTTCCATGGGTGAACTAGCTAGTAATTAATAAAAGCTTGTT
 
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rJMSF045C22+          GTTTTTCAATTTGCGTAATATATGTTGCTCTAAATTTCTTTTGATGTAACCTTTTCTGGA
                      ____________________________________________________________
consensus             GTTTTTCAATTTGCGTAATATATGTTGCTCTAAATTTCTTTTGATGTAACCTTTTCTGGA