Contig 012741:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF019F21+                                                     CCATATATGGGAAATCT
                      ____________________________________________________________
consensus                                                        CCATATATGGGAAATCT
 
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rJMSF019F21+          GGTGTCTTNGATGCCGAAAGATTTATAGATGTCATGCAAGCATTTGAGAATTTCATAACT
rJMSF045B02+                   GATGCCGAAAGATTTATAGATGTCATGCAAGCATTTGAGAATTTCATAACT
                      ____________________________________________________________
consensus             GGTGTCTTNGATGCCGAAAGATTTATAGATGTCATGCAAGCATTTGAGAATTTCATAACT
 
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rJMSF019F21+          GCAGCTAAGAGCGGAGGTGGGGAGAATTTGAATGGGAGAATGGCAGAACTTGGAATTATA
rJMSF045B02+          GCAGCTAAGAGCGGAGGTGGGGAGAATTTGAATGGGAGAATGGCAGAACTTGGAATTATA
                      ____________________________________________________________
consensus             GCAGCTAAGAGCGGAGGTGGGGAGAATTTGAATGGGAGAATGGCAGAACTTGGAATTATA
 
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rJMSF019F21+          CAAACTCAACCAAATTACATGCTTCCTGTACTCCCATTCGCTGCTTCTGAAGGGATGCAA
rJMSF045B02+          CAAACTCAACCAAATTACATGCTTCCTGTACTCCCATTCGCTGCTTCTGAAGGGATGCAA
                      ____________________________________________________________
consensus             CAAACTCAACCAAATTACATGCTTCCTGTACTCCCATTCGCTGCTTCTGAAGGGATGCAA
 
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rJMSF019F21+          CCTGTTAAAACTAGAGCAGCCTTGGGATTTCTAATTTCTGAAAAAGGGAACTTTTTCCGA
rJMSF045B02+          CCTGTTAAAACTAGAGCAGCCTTGGGATTTCTAATTTCTGAAAAAGGGAACTTTTTCCGA
                      ____________________________________________________________
consensus             CCTGTTAAAACTAGAGCAGCCTTGGGATTTCTAATTTCTGAAAAAGGGAACTTTTTCCGA
 
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rJMSF019F21+          GAATTTCTTTTGGATGAGATTGTAAAAGGAATTGATGCAGTTACAAGGGAACAGTTGGTG
rJMSF045B02+          GAATTTCTTTTGGATGAGATTGTAAAAGGAATTGATGCAGTTACAAGGGAACAGTTGGTG
                      ____________________________________________________________
consensus             GAATTTCTTTTGGATGAGATTGTAAAAGGAATTGATGCAGTTACAAGGGAACAGTTGGTG
 
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rJMSF019F21+          CAAATAATGGCTTTACTTGGAATACAAAATGCATCTCCAGTATTCAGCATGGTTCCTACT
rJMSF045B02+          CAAATAATGGCTTTACTTGGAATACAAAATGCATCTCCAGTATTCAGCATGGTTCCTACT
                      ____________________________________________________________
consensus             CAAATAATGGCTTTACTTGGAATACAAAATGCATCTCCAGTATTCAGCATGGTTCCTACT
 
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rJMSF019F21+          TTAGGGCCTATCAAACCCGCTGCGTTTTTGCCAACCATAACGGAGGAGGACAAAGTCATA
rJMSF045B02+          TTAGGGCCTATCAAACCCGCTGCGTTTTTGCCAACCATAACGGAGGAGGACAAAGTCATA
                      ____________________________________________________________
consensus             TTAGGGCCTATCAAACCCGCTGCGTTTTTGCCAACCATAACGGAGGAGGACAAAGTCATA
 
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rJMSF019F21+          TTAAACAATGTCCAGAAGATAGCTGATTTCTTAACAGCTGGAAGTGCAATTTCATCAAAC
rJMSF045B02+          TTAAACAATGTCCAGAAGATAGCTGATTTCTTAACAGCTGGAAGTGCAATTTCATCAAAC
                      ____________________________________________________________
consensus             TTAAACAATGTCCAGAAGATAGCTGATTTCTTAACAGCTGGAAGTGCAATTTCATCAAAC
 
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rJMSF019F21+          CAGGGTGTTGATGTTTCTCGGGCTATTCAAGAACTTCTCCCAGTGCTTCCAGGCCTTTCG
rJMSF045B02+          CAGGGTGTTGATGTTTCTCGGGCTATTCAAGAACTTCTCCCAGTGCTTCCAGGCCTTTCG
                      ____________________________________________________________
consensus             CAGGGTGTTGATGTTTCTCGGGCTATTCAAGAACTTCTCCCAGTGCTTCCAGGCCTTTCG
 
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rJMSF019F21+          GCTAAAGTGCTTCCCGAGGTGCTCAGTCGATTATCTTCCAGAGTATTCGCACGCTTGCTA
rJMSF045B02+          GCTAAAGTGCTTCCCGAGGTGCTCAGTCGATTATCTTCCAGAGTATTCGCACGCTTGCTA
                      ____________________________________________________________
consensus             GCTAAAGTGCTTCCCGAGGTGCTCAGTCGATTATCTTCCAGAGTATTCGCACGCTTGCTA
 
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rJMSF019F21+          CGAGATACACTACTGTAACTCTAATTAATCCATAACTTTCTTGCTCTAAACCACCTGCAT
rJMSF045B02+          CGAGATACACTACTGTAACTCTAATTAATCCATAACTTTCTTGCTCTAAACCACCTGCAT
                      ____________________________________________________________
consensus             CGAGATACACTACTGTAACTCTAATTAATCCATAACTTTCTTGCTCTAAACCACCTGCAT
 
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rJMSF019F21+          TATATTGTGCACATTTGGTGATTCACATGCCTAGAGGCTAGAGTAGAGATTACACAAATA
rJMSF045B02+          TATATTGTGCACATTTGGTGATTCACATGCCTAGAGGCTAGAGTAGAGATTACACAAATA
                      ____________________________________________________________
consensus             TATATTGTGCACATTTGGTGATTCACATGCCTAGAGGCTAGAGTAGAGATTACACAAATA
 
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rJMSF019F21+          CAGTATAGATTGACAATATATTGAATCCTCTCTTTCTGTATTCAAATAACAGAAAAATC 
rJMSF045B02+          CAGTATAGATTGACAATATATTGAATCCTCTCTTTCTGTATTCAAATAACAGAAAAATCG
                      ____________________________________________________________
consensus             CAGTATAGATTGACAATATATTGAATCCTCTCTTTCTGTATTCAAATAACAGAAAAATCG