| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF003C14 | Sequence | 609 | 012740 (5) | gb|EYU34172.1| | 6e-32 | hypothetical protein MIMGU_mgv1a025876mg, partial [Erythranthe guttata] | |||||
| JMSF018B14 | Sequence | 493 | 006575 (4) | ref|XP_009626038.1| | 1e-33 | PREDICTED: putative receptor-like protein kinase At4g00960 [Nicotiana tomentosi | 754 | 012740 (5) | ref|XP_010089690.1| | 6e-86 | Cysteine-rich receptor-like protein kinase 10 [Morus notabilis] gb|EXB38213.1| C |
| JMSF018C10 | Sequence | 249 | 006575 (4) | 738 | 012740 (5) | ref|XP_010089690.1| | 1e-87 | Cysteine-rich receptor-like protein kinase 10 [Morus notabilis] gb|EXB38213.1| C | |||
| JMSF030H06 | Sequence | 618 | 006575 (4) | ref|XP_006365884.1| | 1e-39 | PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Solanum tuberosu | 740 | 012740 (5) | ref|XP_010646643.1| | 2e-77 | PREDICTED: cysteine-rich receptor-like protein kinase 10, partial [Vitis vinife |
| JMSF045A13 | Sequence | 525 | 006575 (4) | emb|CAC84552.1| | 6e-34 | putative receptor-like serine-threonine protein kinase [Solanum tuberosum] | 651 | 012740 (5) | emb|CBI23554.3| | 6e-57 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMSF018C10+ ATTTGGTGAAGTTGCATGGTTACTGCCAAGAAGGAAGAGAAATGATT
rJMSF018B14+ TGCATGGTTACTGCCAAGAAGGAAGAGAAATGATT
____________________________________________________________
consensus ATTTGGTGAAGTTGCATGGTTACTGCCAAGAAGGAAGAGAAATGATT
. : . : . : . : . : . :
rJMSF018C10+ CTTGTCTATGAATTTGTTTCCAATGGTGGCCTTGATGGCTTTTTATTTGATCGTGACAAA
rJMSF018B14+ CTTGTCTATGAATTTGTTTCCAATGGTGGCCTTGATGGCTTTTTATTTGATCGTGACAAA
rJMSF030H06+ GGCTTTTTATTTGATCGTGACAAA
____________________________________________________________
consensus CTTGTCTATGAATTTGTTTCCAATGGTGGCCTTGATGGCTTTTTATTTGATCGTGACAAA
. : . : . : . : . : . :
rJMSF018C10+ TGTGGATACTTGGATTGGGAGAGACGCTACATAATCATAGAAAGTATTGCTAGTGGGCTT
rJMSF018B14+ TGTGGATACTTGGATTGGGAGAGACGCTACATAATCATAGAAAGTATTGCTAGTGGGCTT
rJMSF030H06+ CGTGGATACTTGGATTGGGAGAGAAGCTACAGAATCATAGAAAGTATTGCTAGTGGACTT
____________________________________________________________
consensus TGTGGATACTTGGATTGGGAGAGACGCTACATAATCATAGAAAGTATTGCTAGTGGGCTT
. : . : . : . : . : . :
rJMSF018C10+ ATTTATCTACACAAAGAATCCTCTCCTAATCGTATTATTCATCGCGATCTCAAAGCTAGT
rJMSF018B14+ ATTTATCTACACAAAGAATCCTCTCCTAATCGTATTATTCATCGCGATCTCAAAGCTAGT
rJMSF030H06+ ATTTATCTACACAAAGAATCCTCTCCTAATCGCATTATTCATCGCGATCTCAAAGCTAGT
rJMSF045A13+ ACACAANGAATCCTCTCCTAATCGCATTATTCATCGCGATCTCAAAGCTAGT
____________________________________________________________
consensus ATTTATCTACACAAAGAATCCTCTCCTAATCGTATTATTCATCGCGATCTCAAAGCTAGT
. : . : . : . : . : . :
rJMSF018C10+ AA-CATTCTCTTAGACGCAAATTTAAATCCAAAAATTACAGATTTTGGAATGGCTAGGTT
rJMSF018B14+ AA-CATTCTCTTAGACGCAAATTTAAATCCAAAAATTACAGATTTTGGAATGGCTAGGTT
rJMSF030H06+ AA-CATTCTCTTAGATGTAAATTTAAACCCAAAAATTACAGATTTTGGAATGGCTAGGTT
rJMSF045A13+ AANCATTCTCTTAGATGTAAATTTAAACCCAAAAATTACAGA-TTTGGAATGGCTAGGTT
____________________________________________________________
consensus AA-CATTCTCTTAGATGTAAATTTAAATCCAAAAATTACAGATTTTGGAATGGCTAGGTT
. : . : . : . : . : . :
rJMSF018C10+ GTTTGCTTTAAACCAAACCCAAGGCTCTACAAATACATTGGTGGGATCCCATGGATATAT
rJMSF003C14+ TGGATATAT
rJMSF018B14+ GTTTGCTTTAAACCAAACCCAAGGCTCTACAAATACATTGGTGGGATCCCATGGATATAT
rJMSF030H06+ GTTTGCTTTAAACCAAACCCAAGGCTCTACAAATACATTGGTGGGATCCCATGGATATAT
rJMSF045A13+ GTTTGCTTTAAACCAAACCCAAGGCTCTACAAATACATTGGTGGGATCCCATGGATATAT
____________________________________________________________
consensus GTTTGCTTTAAACCAAACCCAAGGCTCTACAAATACATTGGTGGGATCCCATGGATATAT
. : . : . : . : . : . :
rJMSF018C10+ AGCACCAGAATATGCACGCTTTGGTATATATTCTGATAAATCTGATGTATATAGTTTTGG
rJMSF003C14+ NGCACCAGAATATGCACGCTTTGGTATATATTCTGATAAATCTGATGTATATAGNTTTGG
rJMSF018B14+ AGCACCAGAATATGCACGCTTTGGTATATATTCTGATAAATCTGATGTATATAGTTTTGG
rJMSF030H06+ AGCACCAGAATATGCGCGCTTTGGCATATATTCCGATAAATCTGATGTATATAGTTTTGG
rJMSF045A13+ AGCACCAGAATATGCGCGCTTTGGCATATATTCCGATAAATCTGATGTATATAGTTTTGG
____________________________________________________________
consensus AGCACCAGAATATGCACGCTTTGGTATATATTCTGATAAATCTGATGTATATAGTTTTGG
. : . : . : . : . : . :
rJMSF018C10+ AGTGTTAGTTTTGGAAATTATAAGTGGACAGAGAAATACCATTCAAAGTGGAAATTCTAA
rJMSF003C14+ AGTGTTAGTTTTGGAAATTATAAGTGGACAGAGAAATACCATTCAAAGTGGAAATTCTAA
rJMSF018B14+ AGTGTTAGTTTTGGAAATTATAAGTGGACAGAGAAATACCATTCAAAGTGGAAATTCTAA
rJMSF030H06+ AGTGTTAGTTTTGGAAATTATAAGTGGACAGAGGAATACCATTCAAAGTGGAAATTCTAA
rJMSF045A13+ AGTGTTAGTTTTGGAAATTATAAGTGGACAGAGGAATACCATTCAAAGTGGAAATTCTAA
____________________________________________________________
consensus AGTGTTAGTTTTGGAAATTATAAGTGGACAGAGAAATACCATTCAAAGTGGAAATTCTAA
. : . : . : . : . : . :
rJMSF018C10+ AAAGGACCTTTTATCCGACGTTTGGATAGAATGGGAAAAAGGGTCTACTTCAAATGTGAT
rJMSF003C14+ AAAGGACCTTTTATCCGACGTTTGGATAGAATNGGAAAAAGGGTCTACTTCAAATGTGAT
rJMSF018B14+ AAAGGACCTTTTATCCGACGTTTGGATAGAATGGGAAAAAGGGTCTACTTCAAATGTGAT
rJMSF030H06+ AAAGGACCTTTTATCCGACGTTTGGACAGAATGGGAAAAAGGGTCTACTTCAAATGTGAT
rJMSF045A13+ AAAGGACCTTTTATCCGACGTTTGGACAGAATGGGAAAAAGGGTCTACTTCAAATGTGAT
____________________________________________________________
consensus AAAGGACCTTTTATCCGACGTTTGGATAGAATGGGAAAAAGGGTCTACTTCAAATGTGAT
. : . : . : . : . : . :
rJMSF018C10+ AGATCCATTATTGAAACGTCCATCAAGTCCAAAGCAGGAGATAGGAAGATGCATCCATGT
rJMSF003C14+ AGATCCATTATTGAAACGTCCATCAAGTCCAAAGCAGGAGATAGAAAGANGCATCCATGT
rJMSF018B14+ AGATCCATTATTGAAACGTCCATCAAGTCCAAAGCAGGAGATAGAAAGATGCATCCATGT
rJMSF030H06+ AGATCCATTATTGAAACGTCCATCAAGTCCAAAGCAGGAGATAGAAAGATGCATCCATGT
rJMSF045A13+ AGATCCATTATTGAAACGTCCATCAAGTCCAAAGCAGGAGATAGAAAGATGCATCCATGT
____________________________________________________________
consensus AGATCCATTATTGAAACGTCCATCAAGTCCAAAGCAGGAGATAGAAAGATGCATCCATGT
. : . : . : . : . : . :
rJMSF018C10+ GGCCTTGCTGTGTGTTCAAGAAAATGCAGATGATAGACCTAAAATGCCTATAGTTCATGA
rJMSF003C14+ GGCCTTGCTGTGTGTTCAAGAAAANGCAGNTGATAGACCTAAAATGCCTATAGTTCATGN
rJMSF018B14+ GGCCTTGCTGTGTGTTCAAGAAAATGCAGATGATAGACCTAAAATGCCTATAGTTCATGA
rJMSF030H06+ GGCCTTGCTGTGTGTTCAAGAAAATGCAGATGATAGACCTAAAATGCCTCTAGTTCATGA
rJMSF045A13+ GGCCTTGCTGTGTGTTCAAGAAAATGCAGATGATAGACCTAAAATGCCTCTAGTTCATGA
____________________________________________________________
consensus GGCCTTGCTGTGTGTTCAAGAAAATGCAGATGATAGACCTAAAATGCCTATAGTTCATGA
. : . : . : . : . : . :
rJMSF018C10+ TATGCTAAATCGTAACTTATCTATGAAACTTCCAAAGCCCTCAGTCCCTGGTTTTTATAC
rJMSF003C14+ TATGNNAAATCGNANCTTATCTACGAAACTTCCAAAGCCCTCNGTCCCTGGNTTTTATAC
rJMSF018B14+ TATGCTAAATCGTAACTTATCTATGAAACTTCCAAAGCCCTCAGTCCCTGGTTTTTATAC
rJMSF030H06+ TATGCTAAATCGTAACTTATCTATGGAACTTCCAAAGCCCTCAGTCCCTGGTTTTTATAC
rJMSF045A13+ TATGCTAAATCGTAACTTATCTATGGAACTTCCAAAGCCCTCAGTCCCTGGTTTTTATAC
____________________________________________________________
consensus TATGCTAAATCGTAACTTATCTATGAAACTTCCAAAGCCCTCAGTCCCTGGTTTTTATAC
. : . : . : . : . : . :
rJMSF018C10+ TCAAAGCCGTGTCAATTCATAGACTCCGAG
rJMSF003C14+ TCAAAGCCGTGNCAATTCATAGACTCCGAGACAGTTT
rJMSF018B14+ TCAAAGCCGTGTCAATTCATAGACTCCGAGACAGTTTAAGAATAATGGGATTTCAAACAT
rJMSF030H06+ TCAAAGCCGTGTCAATTCATAGGCTCCGAGGCAGTTTAGGAAGAATGGGATTTCAAACAT
rJMSF045A13+ TCAAAGCCGTGTCAATTCATAGGCTCCGAGGCAGTTTAGGAAGAATGGGATTTCAAACAT
____________________________________________________________
consensus TCAAAGCCGTGTCAATTCATAGACTCCGAGGCAGTTTAGGAAGAATGGGATTTCAAACAT
. : . : . : . : . : . :
rJMSF030H06+ TTAGTGTCGTATATGCTGAATGATCACTTTTAGTATTGTATGTGGGAAAAAAA
rJMSF045A13+ TTAGTGTCGTATATGCTGAATGATCACTTTTAGTATTGTATGTTGGGAAAAAAATATTTT
____________________________________________________________
consensus TTAGTGTCGTATATGCTGAATGATCACTTTTAGTATTGTATGTTGGGAAAAAAATATTTT