| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF022C20 | Sequence | 674 | 003764 (4) | ref|XP_009594051.1| | 7e-31 | PREDICTED: formin-binding protein 4 isoform X1 [Nicotiana tomentosiformis] | 737 | 012733 (3) | ref|XP_009594051.1| | 1e-55 | PREDICTED: formin-binding protein 4 isoform X1 [Nicotiana tomentosiformis] |
| JMSF034C17 | Sequence | 687 | 003764 (4) | ref|XP_009594051.1| | 2e-31 | PREDICTED: formin-binding protein 4 isoform X1 [Nicotiana tomentosiformis] | 735 | 012733 (3) | ref|XP_009594051.1| | 8e-55 | PREDICTED: formin-binding protein 4 isoform X1 [Nicotiana tomentosiformis] |
| JMSF043M20 | Sequence | 741 | 003764 (4) | ref|XP_009594051.1| | 9e-35 | PREDICTED: formin-binding protein 4 isoform X1 [Nicotiana tomentosiformis] | 709 | 012733 (3) | ref|XP_009594051.1| | 5e-55 | PREDICTED: formin-binding protein 4 isoform X1 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF022C20+ TACTGAAGTGAGCTCTGTTTTGCCAATTCAAAAC
____________________________________________________________
consensus TACTGAAGTGAGCTCTGTTTTGCCAATTCAAAAC
. : . : . : . : . : . :
rJMSF022C20+ ACACCCAATGGTGGTGTTGATGTTGGGAGTTCAGGGGTATCTTTAGGTTTTCCTTCTCAA
____________________________________________________________
consensus ACACCCAATGGTGGTGTTGATGTTGGGAGTTCAGGGGTATCTTTAGGTTTTCCTTCTCAA
. : . : . : . : . : . :
rJMSF022C20+ ACATCCTTGCAAGGCACAGACACTATCTTGCCTCCAGAGAACACTTTGGTCGCATCCACT
rJMSF034C17+ TCCAGAGAACACTTTGGTCGCATCCACT
____________________________________________________________
consensus ACATCCTTGCAAGGCACAGACACTATCTTGCCTCCAGAGAACACTTTGGTCGCATCCACT
. : . : . : . : . : . :
rJMSF022C20+ TCTTCTGCTACTTCTACAGCAACAGCTTCTAATGTTCCATCTAAAGTTGCTCGTAAAAAG
rJMSF034C17+ TCTTCTGCTACTTCTACAGCAACAGCTTCTAATGTTCCATCTAAAGTTGCTCGTAAAAAG
rJMSF043M20+ TAATGTTCCATCTAAAGTTGCTCGTAAAAAG
____________________________________________________________
consensus TCTTCTGCTACTTCTACAGCAACAGCTTCTAATGTTCCATCTAAAGTTGCTCGTAAAAAG
. : . : . : . : . : . :
rJMSF022C20+ AAGGGCACTGTTGCTGTAGGCTCGACATTAAGGTCAAATAAAAAAGTCTCCAATTTGGTT
rJMSF034C17+ AAGGGCACTGTTGCTGTAGGCTCGACATTAAGGTCAAATAAAAAAGTCTCCAATTTGGTT
rJMSF043M20+ AAGGGCACTGTTGCTGTAGGCTCGACATTAAGGTCAAATAAAAAAGTCTCCAATTTGGTT
____________________________________________________________
consensus AAGGGCACTGTTGCTGTAGGCTCGACATTAAGGTCAAATAAAAAAGTCTCCAATTTGGTT
. : . : . : . : . : . :
rJMSF022C20+ GACAAGTGGAAGGCTGCAAAAGAAGAGCTGCATGCAGAAGAAGAAGAGGAACGTGCAAGT
rJMSF034C17+ GACAAGTGGAAGGCTGCAAAAGAAGAGCTGCATGCAGAAGAAGAAGAGGAACGTGCAAGT
rJMSF043M20+ GACAAGTGGAAGGCTGCAAAAGAAGAGCTGCATGCAGAAGAAGAAGAGGAACGTGCAAGT
____________________________________________________________
consensus GACAAGTGGAAGGCTGCAAAAGAAGAGCTGCATGCAGAAGAAGAAGAGGAACGTGCAAGT
. : . : . : . : . : . :
rJMSF022C20+ GCATATGAAATATTAGAGAAGAAACGTCAACGAGAAATTGAGGAATGGCGTGCACAGCAG
rJMSF034C17+ GCATATGAAATATTAGAGAAGAAACGTCAACGAGAAATTGAGGAATGGCGTGCACAGCAG
rJMSF043M20+ GCATATGAAATATTAGAGAAGAAACGTCAACGAGAAATTGAGGAATGGCGTGCACAGCAG
____________________________________________________________
consensus GCATATGAAATATTAGAGAAGAAACGTCAACGAGAAATTGAGGAATGGCGTGCACAGCAG
. : . : . : . : . : . :
rJMSF022C20+ ATAGCCAGTGGAGAGGCTAAAGATAATGCTAACTTTCAGCCACTGGGTGGTGATTGGCGA
rJMSF034C17+ ATAGCCAGTGGAGAGGCTAAAGATAATGCTAACTTTCAGCCACTGGGTGGTGATTGGCGA
rJMSF043M20+ ATAGCCAGTGGAGAGGCTAAAGATAATGCTAACTTTCAGCCACTGGGTGGTGATTGGCGA
____________________________________________________________
consensus ATAGCCAGTGGAGAGGCTAAAGATAATGCTAACTTTCAGCCACTGGGTGGTGATTGGCGA
. : . : . : . : . : . :
rJMSF022C20+ GAGCGTGTAAAACGAAGAAGAGCTGAAAAGATGAAAGAGACTGAAAAGAAGCCCACTGAT
rJMSF034C17+ GAGCGTGTAAAACGAAGAAGAGCTGAAAAGATGAAAGAGACTGAAAAGAAGCCCACTGAT
rJMSF043M20+ GAGCGTGTAAAACGAAGAAGAGCTGAAAAGATGAAAGAGACTGAAAAGAAGCCCACTGAT
____________________________________________________________
consensus GAGCGTGTAAAACGAAGAAGAGCTGAAAAGATGAAAGAGACTGAAAAGAAGCCCACTGAT
. : . : . : . : . : . :
rJMSF022C20+ GGTACTGAAGAAAATCAACAGCCTGATCTTAATGCGTTATCAATAGGTCTTCCATCTGGA
rJMSF034C17+ GGTACTGAAGAAAATCAACAGCCTGATCTTAATGCGTTATCAATAGGTCTTCCATCTGGA
rJMSF043M20+ GGTACTGAAGAAAATCAACAGCCTGATCTTAATGCGTTATCAATAGGTCTTCCATCTGGA
____________________________________________________________
consensus GGTACTGAAGAAAATCAACAGCCTGATCTTAATGCGTTATCAATAGGTCTTCCATCTGGA
. : . : . : . : . : . :
rJMSF022C20+ TGGCAGGCATACTGGGATGAGTCGTCGAAACAGGTGTATTATGGAAATGCTGCAACATCG
rJMSF034C17+ TGGCAGGCATACTGGGATGAGTCGTCGAAACAGGTGTATTATGGAAATGCTGCAACATCG
rJMSF043M20+ TGGCAGGCATACTGGGATGAGTCGTCGAAACAGGTGTATTATGGAAATGCTGCAACATCG
____________________________________________________________
consensus TGGCAGGCATACTGGGATGAGTCGTCGAAACAGGTGTATTATGGAAATGCTGCAACATCG
. : . : . : . : . : . :
rJMSF022C20+ GAAACAACCTGGACTAGACCAACAACTTGAGAAATGTGTTGTCATTTTTGGTTTTGGTTG
rJMSF034C17+ GAAACAACCTGGACTAGACCAACAACTTGAGAAATGTGTTGTCATTTTTGGTTTTGGTTG
rJMSF043M20+ GAAACAACCTGGACTAGACCAACAACTTGAGAAATGTGTTGTCATTTTTGGTTTTGGTTG
____________________________________________________________
consensus GAAACAACCTGGACTAGACCAACAACTTGAGAAATGTGTTGTCATTTTTGGTTTTGGTTG
. : . : . : . : . : . :
rJMSF022C20+ ATGCATTATGTGTGTTCTTGTATTGTAAATATCAGATAATGT
rJMSF034C17+ ATGCATTATGTGTGTTCTTGTATTGTAAATATCAGATAATGTTACATTCATGCAACTTCC
rJMSF043M20+ ATGCATTATGTGTGTTCTTGTATTGTAAATATCAGATAATGTTACATTCATGCAACTTCC
____________________________________________________________
consensus ATGCATTATGTGTGTTCTTGTATTGTAAATATCAGATAATGTTACATTCATGCAACTTCC
. : . : . : . : . : . :
rJMSF034C17+ AAGTTTGATTTGATTATAACCTTTCTTTCAAGTCCCAACTTCATCTACTCTCCTTTTTTC
rJMSF043M20+ AAGTTTGATTTGATTATAACCTTTCTTTCAAGTCCCAACTTCATCTACTCTCCTTTTTTC
____________________________________________________________
consensus AAGTTTGATTTGATTATAACCTTTCTTTCAAGTCCCAACTTCATCTACTCTCCTTTTTTC
. : . : . : . : . : . :
rJMSF034C17+ CATTGCCTAATTTTGAGTTAATAAGGCTGAGTAGTGGTCATGGTCTT
rJMSF043M20+ CATTGCCTAATTTTGAGTTAATAAGGCTGAGTAGTGGTCATGGTCTTTGTACTTCTAAAA
____________________________________________________________
consensus CATTGCCTAATTTTGAGTTAATAAGGCTGAGTAGTGGTCATGGTCTTTGTACTTCTAAAA