| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014J03 | Sequence | 557 | 012731 (5) | emb|CDP01157.1| | 1e-84 | unnamed protein product [Coffea canephora] | 763 | 012731 (5) | emb|CDP01157.1| | 3e-105 | unnamed protein product [Coffea canephora] |
| JMSF043A16 | Sequence | 785 | 006695 (3) | emb|CAN68478.1| | 1e-107 | hypothetical protein VITISV_029628 [Vitis vinifera] | 638 | 012731 (5) | gb|EYU43608.1| | 3e-66 | hypothetical protein MIMGU_mgv1a001835mg [Erythranthe guttata] |
| JMSF044L05 | Sequence | 659 | 006695 (3) | ref|XP_010094986.1| | 2e-81 | hypothetical protein L484_006858 [Morus notabilis] gb|EXB57745.1| hypothetical p | 805 | 012731 (5) | ref|XP_009781050.1| | 1e-139 | PREDICTED: exocyst complex component SEC6 isoform X1 [Nicotiana sylvestris] ref |
| JMSF053O13 | Sequence | 629 | 006695 (3) | ref|XP_010094986.1| | 6e-80 | hypothetical protein L484_006858 [Morus notabilis] gb|EXB57745.1| hypothetical p | 842 | 012731 (5) | emb|CDP01157.1| | 9e-127 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMSF044L05+ CTGAG
____________________________________________________________
consensus CTGAG
. : . : . : . : . : . :
rJMSF044L05+ AGGTTTATTCAGTGGCTGAGAAAGCTAAGTGACCAAGCTAATAATCTGACAAATATAGAG
____________________________________________________________
consensus AGGTTTATTCAGTGGCTGAGAAAGCTAAGTGACCAAGCTAATAATCTGACAAATATAGAG
. : . : . : . : . : . :
rJMSF044L05+ ATTTTAAAGGTAACTGGCTGGGTAGTGGAATACCAAGAGAATTTAATTGCACTTGGAGTT
____________________________________________________________
consensus ATTTTAAAGGTAACTGGCTGGGTAGTGGAATACCAAGAGAATTTAATTGCACTTGGAGTT
. : . : . : . : . : . :
rJMSF044L05+ GATGAGTCTTTGGCTCAAGTTTGTTCTGAGAGTGGTTCAATGGATCCCCTCATGAATGCT
____________________________________________________________
consensus GATGAGTCTTTGGCTCAAGTTTGTTCTGAGAGTGGTTCAATGGATCCCCTCATGAATGCT
. : . : . : . : . : . :
rJMSF044L05+ TATGTTGAGAGAATGCAGGCAACAACTAAGAAATGGTACCTGAACATTCTTGAGGCAGAT
____________________________________________________________
consensus TATGTTGAGAGAATGCAGGCAACAACTAAGAAATGGTACCTGAACATTCTTGAGGCAGAT
. : . : . : . : . : . :
rJMSF044L05+ AAAGTACAGCCACCAAAAAAGACTGATGATGGAAAACTATATACACCTGCTGCTGTTGAC
____________________________________________________________
consensus AAAGTACAGCCACCAAAAAAGACTGATGATGGAAAACTATATACACCTGCTGCTGTTGAC
. : . : . : . : . : . :
rJMSF044L05+ CTGTTTAGGATCCTTGAGAGCAAGTGCAAATTGTGCGAGACAATAGTACTGATGTCATGC
____________________________________________________________
consensus CTGTTTAGGATCCTTGAGAGCAAGTGCAAATTGTGCGAGACAATAGTACTGATGTCATGC
. : . : . : . : . : . :
rJMSF044L05+ TATACAGAATTGCTTTGGCAATAATTCAGGTAATGATTGACTTTCAAGGTGCTGAAAGAA
____________________________________________________________
consensus TATACAGAATTGCTTTGGCAATAATTCAGGTAATGATTGACTTTCAAGGTGCTGAAAGAA
. : . : . : . : . : . :
rJMSF044L05+ AGAGATTAGAAGAACCTGCATCTGAAATTGGTTTGGAGCCTCTATGTGCAGTGATAAACA
JMFF014J03- AAGATCCTGCATCTGAAATTGGTTTGGAGCCTCTATGTGCAGTGATAAACA
____________________________________________________________
consensus AGAGATTAGAAGATCCTGCATCTGAAATTGGTTTGGAGCCTCTATGTGCAGTGATAAACA
. : . : . : . : . : . :
rJMSF044L05+ ATAACCTTCGCTGTTATGATCTCGCTATGGAGCTAAGTTCTAGCACCATTGAAGCTCTTC
JMFF014J03- ATAACCTTCGCTGTTATGATCTCGCTATGGAGCTAAGTTCTAGCACCATTGAAGCTCTTC
____________________________________________________________
consensus ATAACCTTCGCTGTTATGATCTCGCTATGGAGCTAAGTTCTAGCACCATTGAAGCTCTTC
. : . : . : . : . : . :
rJMSF044L05+ CGGAGAATTATGCTGAGCAGGTTAATTTTGAGGATACCTGCAAAGGTTTTCTTGAGGTTG
JMFF014J03- C-GACAATTATGCTGAGCAGGTTAATTTTGAGGATACCTGCAAAGGTTTTCTTGAGGTTG
rJMSF053O13+ TGCTGAGCAGGTTAATTTTGAGGATACCTGCAAAGGTTTTCTTGAGGTTG
____________________________________________________________
consensus CGGAGAATTATGCTGAGCAGGTTAATTTTGAGGATACCTGCAAAGGTTTTCTTGAGGTTG
. : . : . : . : . : . :
rJMSF044L05+ CCAAGGAAGCTGTTCATCAAACTGTCAATGTCA-TTTTTGAAGATCCTGGAGTGCAGGAA
JMFF014J03- CCAAGGAAGCTGTTCATCAAACTGTCAATGTCA-TTTTTGAAGATCCTGGAGTGCAGGAA
rJMSF053O13+ CCAAGGAAGCTGTTCATCAAACTGTCAATGTCATTTTTTGAAGATCCTGGAGTGCAGGAA
____________________________________________________________
consensus CCAAGGAAGCTGTTCATCAAACTGTCAATGTCA-TTTTTGAAGATCCTGGAGTGCAGGAA
. : . : . : . : . : . :
rJMSF044L05+ TTATTTGTTAAACTGTATCAAAGAGATTGGTTGGAAGGACAGGTTACTGAGTACCTAGTT
JMFF014J03- TTATTTGTTAAACTGTATCAAAGAGATTGGTTGGAAGGACAGGTTACTGAGTACCTAGTT
rJMSF053O13+ TTATTTGTTAAACTGTATCAAAGAGATTGGTTGGAAGGACAGGTTACTGAGTACCTAGTT
rJMFF014J03+ AGTT
____________________________________________________________
consensus TTATTTGTTAAACTGTATCAAAGAGATTGGTTGGAAGGACAGGTTACTGAGTACCTAGTT
. : . : . : . : . : . :
rJMSF044L05+ GCAACATTTGTGGATTATTTCACTGATGTGAAAATGTACATTGAGGAAAGATCATTTAGG
JMFF014J03- GCAACATTTGTGGATTATTTCACTGATGTGAAAATGTACATTGAGGAAAGATCATTTAGG
rJMSF053O13+ GCAACATTTGTGGATTATTTCACTGATGTGAAAATGTACATTGAGGAAAGATCATTTAGG
rJMFF014J03+ GCAACATTTGTGGATTATTTCACTGATGTGAAAATGTACATTGAGGAAAGATCATTTAGG
____________________________________________________________
consensus GCAACATTTGTGGATTATTTCACTGATGTGAAAATGTACATTGAGGAAAGATCATTTAGG
. : . : . : . : . : . :
rJMSF044L05+ CGTTTTGTTGAGGCTTGCT
JMFF014J03- CGTTTTGTTGAGGCTTGCTTGGAGGAGACAGTAGTTGTTTATGTGGATCATCTGCTTATA
rJMSF053O13+ CGTTTTGTTGAGGCTTGCTTGGAGGAGACAGTAGTTGTTTATGTGGATCATCTGCTTATA
rJMFF014J03+ CGTTTTGTTGAGGCTTGCTTGGAGGAGACAGTAGTTGTTTATGTGGATCATCTGCTTATA
____________________________________________________________
consensus CGTTTTGTTGAGGCTTGCTTGGAGGAGACAGTAGTTGTTTATGTGGATCATCTGCTTATA
. : . : . : . : . : . :
JMFF014J03- CAGAAAAATTATATCAAGGAAGAAACAATTGAAAGAATGAGGCTAAGATGAAGAAGTTCT
rJMSF053O13+ CAGAAAAATTATATCAAGGAAGAAACAATTGAAAGAATGAGGCT-AGATGAAGAAGTTCT
rJMFF014J03+ CAGAAAAATTATATCAAGGAAGAAACAATTGAAAGAATGAGGCT-AGATGAAGAAGTTCT
rJMSF043A16+ AAGAAACANTTGAAAGAATGAGGCT-AGATGAAGAAGTTCT
____________________________________________________________
consensus CAGAAAAATTATATCAAGGAAGAAACAATTGAAAGAATGAGGCT-AGATGAAGAAGTTCT
. : . : . : . : . : . :
JMFF014J03- CATGGATTTCTTCAGGGAGTACATCAGTGTTTCTAAAGTAGAGAACAGATTAAGGATACT
rJMSF053O13+ CATGGATTTCTTCAGGGAGTACATCAGTGTTTCTAAAGTAGAGAACAGATTAAGGATACT
rJMFF014J03+ CATGGATTTCTTCAGGGAGTACATCAGTGTTTCTAAAGTAGAGAACAGATTAAGGATACT
rJMSF043A16+ CATGGATTTCTTCAGGGAGTACATCAGTGTTTCTAAAGTAGAGAACAGATTAAGGATACT
____________________________________________________________
consensus CATGGATTTCTTCAGGGAGTACATCAGTGTTTCTAAAGTAGAGAACAGATTAAGGATACT
. : . : . : . : . : . :
JMFF014J03- TGGTGATTTAAGAGAACTTGCTTCTTCA
rJMSF053O13+ TGGTGATTTAAGAGAACTTGCTTCTTCAGAGAGCCCTGATTCTTTCACCCTCGTCTACAC
rJMFF014J03+ TGGTGATTTAAGAGAACTTGCTTCTTCAGAGAGCCCTGATTCTTTCACCCTCGTCTACAC
rJMSF043A16+ TGGTGATTTAAGAGAACTTGCTTCTTCAGAGAGCCCTGATTCTTTCACCCTCGTCTACAC
____________________________________________________________
consensus TGGTGATTTAAGAGAACTTGCTTCTTCAGAGAGCCCTGATTCTTTCACCCTCGTCTACAC
. : . : . : . : . : . :
rJMSF053O13+ AAACATTCTGGAGCATCAACCAGATTGTCCTCCAGAGGTAGTTGAAAAGATTGTGGGATT
rJMFF014J03+ AAACATTCTGGAGCATCAACCAGATTGTCCTCCAGAGGTAGTTGAAAAGATTGTGGGATT
rJMSF043A16+ AAACATTCTGGAGCATCAACCAGATTGTCCTCCAGAGGTAGTTGAAAAGATTGTGGGATT
____________________________________________________________
consensus AAACATTCTGGAGCATCAACCAGATTGTCCTCCAGAGGTAGTTGAAAAGATTGTGGGATT
. : . : . : . : . : . :
rJMSF053O13+ GCGAGAGGGCATACCNCGAAAAGATGCCAGAGAGGTTGTTCAAGAATGCAAAGAAATATA
rJMFF014J03+ GCGAGAGGGCATACCACGAAAAGATGCCAGAGAGGTTGTTCAAGAATGCAAAGAAATATA
rJMSF043A16+ GCGAGAGGGCATACCACGAAAAGATGCCAGAGAGGTTGTTCAAGAATGCAAAGAAATATA
____________________________________________________________
consensus GCGAGAGGGCATACCACGAAAAGATGCCAGAGAGGTTGTTCAAGAATGCAAAGAAATATA
. : . : . : . : . : . :
rJMSF053O13+ TGAAAACTCTCTGATTGATGGGAATCCTCCAAAGGCGGGCTTTGTTTTCCCCAGGGTGAA
rJMFF014J03+ TGAAAACTCTCTGATTGATGGGAATCCTCCAAAGGCGGGCTTTGTTTTCCCCAGGGTGAA
rJMSF043A16+ TGAAAACTCTCTGATTGATGGGAATCCTCCAAAGGCGGGCTTTGTTTTCCCCAGGGTGAA
____________________________________________________________
consensus TGAAAACTCTCTGATTGATGGGAATCCTCCAAAGGCGGGCTTTGTTTTCCCCAGGGTGAA
. : . : . : . : . : . :
rJMSF053O13+ GAGCTTGTCACATTCAAAAGTTTCAAACTTGTGGAGAAAGCTTACGTAAGCTGGATCATT
rJMFF014J03+ GAGCTTGTCACATTCAAAAGTTTCAAACTTGTGGAGAAAGCTTACGTAAGCTGGATCATT
rJMSF043A16+ GAGCTTGTCACATTC--AAGTTTCAAACTTGTGGAGAAAGCTTACGTAAGCTGGATCATT
____________________________________________________________
consensus GAGCTTGTCACATTCAAAAGTTTCAAACTTGTGGAGAAAGCTTACGTAAGCTGGATCATT
. : . : . : . : . : . :
rJMSF053O13+ GAAATTATCAGGTTCTATATACTCCCCNTTATTCTGAATGTTACTATGATACGTTGCTGC
rJMFF014J03+ GAAATTATCAGGTTCTATATACTCCCCATTATTCTGAATGTTACTATGATACGTTGCTGC
rJMSF043A16+ GAAATTATCAGGTTCTATATACTCCCCATTATTCTGAATGTTACTATGATACGTTGCTGC
____________________________________________________________
consensus GAAATTATCAGGTTCTATATACTCCCCATTATTCTGAATGTTACTATGATACGTTGCTGC
. : . : . : . : . : . :
rJMSF053O13+ TGTGTAATATTCTTATTTCCTACTGCTGGTTACTGTTATTTTTTGTAAAAAAAAA
rJMFF014J03+ TGTGTAATATTCTTATTTCCTACTGCTGGTTACTGTTATTTTTTGTAAAAAAAAATGTAT
rJMSF043A16+ TGTGTAATATTCTTATTTCCTACTGCTGGTTACTGTTATTTTTTGTAAAAAAAAATGTAT
____________________________________________________________
consensus TGTGTAATATTCTTATTTCCTACTGCTGGTTACTGTTATTTTTTGTAAAAAAAAATGTAT
. : . : . : . : . : . :
rJMFF014J03+ TTGTGGTGTGTCTAACTCCATTTCTTATCAGAAGAAAATATTGATGTGATTGTATATTTT
rJMSF043A16+ TTGTGGTGTGTCTAACTCCATTTCTTATCAGAAGAAAATATTGATGTGATTGTATATTTT
____________________________________________________________
consensus TTGTGGTGTGTCTAACTCCATTTCTTATCAGAAGAAAATATTGATGTGATTGTATATTTT
. : . : . : . : . : . :
rJMFF014J03+ TCTTTCCATGCCCTAAGAAAACGTTCTTTTAT
rJMSF043A16+ TCTTTCCATGCCCTAAGAAAACGTTCTTTTATTGAGAGAATTATGAGCTTCATTCCAGGG
____________________________________________________________
consensus TCTTTCCATGCCCTAAGAAAACGTTCTTTTATTGAGAGAATTATGAGCTTCATTCCAGGG