Contig 012730:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035F16Sequence495000928 (3)ref|XP_009624799.1|2e-18PREDICTED: outer envelope protein 64, mitochondrial [Nicotiana tomentosiformis]229012730 (3)
JMSF042O10Sequence747000928 (3)ref|XP_009624799.1|6e-50PREDICTED: outer envelope protein 64, mitochondrial [Nicotiana tomentosiformis]561012730 (3)ref|XP_009624799.1|4e-07PREDICTED: outer envelope protein 64, mitochondrial [Nicotiana tomentosiformis]
JMSF049B23Sequence687000928 (3)ref|XP_009776046.1|5e-37PREDICTED: outer envelope protein 64, mitochondrial [Nicotiana sylvestris]701012730 (3)ref|XP_009624799.1|1e-80PREDICTED: outer envelope protein 64, mitochondrial [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF049B23+ CTTTCATTGCATCACATGGAAGTGATAACTTTTTGCTTCATACT
                      ____________________________________________________________
consensus CTTTCATTGCATCACATGGAAGTGATAACTTTTTGCTTCATACT
 
. : . : . : . : . : . :
rJMSF049B23+ ATACGAGATATGTATCCATCGCTTGAAGAAGAAGTAAGAATGGCTTCAAATGTATCCGCT
                      ____________________________________________________________
consensus ATACGAGATATGTATCCATCGCTTGAAGAAGAAGTAAGAATGGCTTCAAATGTATCCGCT
 
. : . : . : . : . : . :
rJMSF049B23+ TTACCAGAAACGGTTGTTAGCATGGATGCATCTGAACTGTTGAAAGAAAAGGGAAATGCT
                      ____________________________________________________________
consensus TTACCAGAAACGGTTGTTAGCATGGATGCATCTGAACTGTTGAAAGAAAAGGGAAATGCT
 
. : . : . : . : . : . :
rJMSF049B23+ GCATATAAGGGAAGGCTGTGGAATAAGGCTGTAAGCTACTACTCCGAGGCAATAAAATTA
                      ____________________________________________________________
consensus GCATATAAGGGAAGGCTGTGGAATAAGGCTGTAAGCTACTACTCCGAGGCAATAAAATTA
 
. : . : . : . : . : . :
rJMSF049B23+ AATGATATGAATGCAACTTACTATAGCAACCGGGCAGCTGCTTACTTGGAATTGGGATGC
                      ____________________________________________________________
consensus AATGATATGAATGCAACTTACTATAGCAACCGGGCAGCTGCTTACTTGGAATTGGGATGC
 
. : . : . : . : . : . :
rJMSF049B23+ TTCCAACAAGCAGAAGAGGACTGCACCAAAGCTATTTCTCTCGATATAAAGAATGTGAAG
                      ____________________________________________________________
consensus TTCCAACAAGCAGAAGAGGACTGCACCAAAGCTATTTCTCTCGATATAAAGAATGTGAAG
 
. : . : . : . : . : . :
rJMSF049B23+ GCATATCTGAGACGAGGGACGGCTAGGGAGTCCCTTCTTTTGAAGAAAGAAGCTCTTCAA
rJMSF042O10+ TTGAAGAAAGAAGCTCTTCAA
                      ____________________________________________________________
consensus GCATATCTGAGACGAGGGACGGCTAGGGAGTCCCTTCTTTTGAAGAAAGAAGCTCTTCAA
 
. : . : . : . : . : . :
rJMSF049B23+ GATTTCAGGCATGCCCATGTTCTGGAACCACAGAACAAGATTGCAAAGCTGGCTGAAAAG
rJMSF042O10+ GATTTCAGGCATGCCCATGTTCTGGAACCACAGAACAAGATTGCAAAGCTGGCTGAAAAG
                      ____________________________________________________________
consensus GATTTCAGGCATGCCCATGTTCTGGAACCACAGAACAAGATTGCAAAGCTGGCTGAAAAG
 
. : . : . : . : . : . :
rJMSF049B23+ AGACTGAAGAAGCTGATTAGTATTTGATACTATATAGCACCGACACAAGAGAGACTATGA
rJMFF035F16+ AGAGAGACTATGA
rJMSF042O10+ AGACTGAAGAAGCTGATTAGTATTTGATACTATATAGCACCGACACAAGAGAGACTATGA
                      ____________________________________________________________
consensus AGACTGAAGAAGCTGATTAGTATTTGATACTATATAGCACCGACACAAGAGAGACTATGA
 
. : . : . : . : . : . :
rJMSF049B23+ AAACCGACGAGCACTTCCTGCTCCATATGTGAACCTTTTCGGGTAAAAACAGACTCGAAT
rJMFF035F16+ AAACCGACGAGCACTTCCTGCTCCATATGTGAACCTTTTCGGGTAAAAACAGACTCGAAT
rJMSF042O10+ AAACCGACGAGCACTTCCTGCTCCATATGTGAACCTTTTCGGGTAAAAACAGACTCGAAT
                      ____________________________________________________________
consensus AAACCGACGAGCACTTCCTGCTCCATATGTGAACCTTTTCGGGTAAAAACAGACTCGAAT
 
. : . : . : . : . : . :
rJMSF049B23+ AACAGGTGGATATCGCTGATGACAGATTTACCCTCATGTTTGAGGTTCAGCTGTGTATAT
rJMFF035F16+ AACAGGTGGATATCGCTGATGACAGATTTACCCTCATGTTTGAGGTTCAGCTGTGTATAT
rJMSF042O10+ AACAGGTGGATATCGCTGATGACAGATTTACCCTCATGTTTGAGGTTCAGCTGTGTATAT
                      ____________________________________________________________
consensus AACAGGTGGATATCGCTGATGACAGATTTACCCTCATGTTTGAGGTTCAGCTGTGTATAT
 
. : . : . : . : . : . :
rJMSF049B23+ AATTGTTGTAATATGACGATGAAT
rJMFF035F16+ AATTGTTGTAATATGACGATGAATCCATGAACCCTGTTTTTTTTTGTGTTGAATCACAAG
rJMSF042O10+ AATTGTTGTAATATGACGATGAATCCATGAACCCTGTTTTTTTTTGTGTTGAATCACAAG
                      ____________________________________________________________
consensus AATTGTTGTAATATGACGATGAATCCATGAACCCTGTTTTTTTTTGTGTTGAATCACAAG
 
. : . : . : . : . : . :
rJMFF035F16+ CCATGTAGACTGTTGTCTGGTGTGATGAGGCAATTA
rJMSF042O10+ CCATGTAGACTGTTGTCTGGTGTGATGAGGCAATTAATGAGATTTTGGCTTTGGTTTGTT
                      ____________________________________________________________
consensus CCATGTAGACTGTTGTCTGGTGTGATGAGGCAATTAATGAGATTTTGGCTTTGGTTTGTT
 
. : . : . : . : . : . :
rJMSF042O10+ AAGCCTGTTAAAGTGCTATCTGCCCCTAGGCATTAGTATAATGCATGAGAAATTATACTA
                      ____________________________________________________________
consensus AAGCCTGTTAAAGTGCTATCTGCCCCTAGGCATTAGTATAATGCATGAGAAATTATACTA
 
. : . : . : . : . : . :
rJMSF042O10+ ANGCCCATGTACAGAAGTAGTAGTGTACAGTTTAGTGTTGAGTCTCGGGAGAGTAGGATG
                      ____________________________________________________________
consensus ANGCCCATGTACAGAAGTAGTAGTGTACAGTTTAGTGTTGAGTCTCGGGAGAGTAGGATG
 
. : . : . : . : . : . :
rJMSF042O10+ AACTTTGAAAAGGATTATACCGCACTCTTCTAGAAGATTGTGCCCAGCATTTCTGAATGT
                      ____________________________________________________________
consensus AACTTTGAAAAGGATTATACCGCACTCTTCTAGAAGATTGTGCCCAGCATTTCTGAATGT