Contig 012730:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035F16Sequence495000928 (3)ref|XP_009624799.1|2e-18PREDICTED: outer envelope protein 64, mitochondrial [Nicotiana tomentosiformis]229012730 (3)
JMSF042O10Sequence747000928 (3)ref|XP_009624799.1|6e-50PREDICTED: outer envelope protein 64, mitochondrial [Nicotiana tomentosiformis]561012730 (3)ref|XP_009624799.1|4e-07PREDICTED: outer envelope protein 64, mitochondrial [Nicotiana tomentosiformis]
JMSF049B23Sequence687000928 (3)ref|XP_009776046.1|5e-37PREDICTED: outer envelope protein 64, mitochondrial [Nicotiana sylvestris]701012730 (3)ref|XP_009624799.1|1e-80PREDICTED: outer envelope protein 64, mitochondrial [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF049B23+                          CTTTCATTGCATCACATGGAAGTGATAACTTTTTGCTTCATACT
                      ____________________________________________________________
consensus                             CTTTCATTGCATCACATGGAAGTGATAACTTTTTGCTTCATACT
 
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rJMSF049B23+          ATACGAGATATGTATCCATCGCTTGAAGAAGAAGTAAGAATGGCTTCAAATGTATCCGCT
                      ____________________________________________________________
consensus             ATACGAGATATGTATCCATCGCTTGAAGAAGAAGTAAGAATGGCTTCAAATGTATCCGCT
 
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rJMSF049B23+          TTACCAGAAACGGTTGTTAGCATGGATGCATCTGAACTGTTGAAAGAAAAGGGAAATGCT
                      ____________________________________________________________
consensus             TTACCAGAAACGGTTGTTAGCATGGATGCATCTGAACTGTTGAAAGAAAAGGGAAATGCT
 
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rJMSF049B23+          GCATATAAGGGAAGGCTGTGGAATAAGGCTGTAAGCTACTACTCCGAGGCAATAAAATTA
                      ____________________________________________________________
consensus             GCATATAAGGGAAGGCTGTGGAATAAGGCTGTAAGCTACTACTCCGAGGCAATAAAATTA
 
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rJMSF049B23+          AATGATATGAATGCAACTTACTATAGCAACCGGGCAGCTGCTTACTTGGAATTGGGATGC
                      ____________________________________________________________
consensus             AATGATATGAATGCAACTTACTATAGCAACCGGGCAGCTGCTTACTTGGAATTGGGATGC
 
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rJMSF049B23+          TTCCAACAAGCAGAAGAGGACTGCACCAAAGCTATTTCTCTCGATATAAAGAATGTGAAG
                      ____________________________________________________________
consensus             TTCCAACAAGCAGAAGAGGACTGCACCAAAGCTATTTCTCTCGATATAAAGAATGTGAAG
 
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rJMSF049B23+          GCATATCTGAGACGAGGGACGGCTAGGGAGTCCCTTCTTTTGAAGAAAGAAGCTCTTCAA
rJMSF042O10+                                                 TTGAAGAAAGAAGCTCTTCAA
                      ____________________________________________________________
consensus             GCATATCTGAGACGAGGGACGGCTAGGGAGTCCCTTCTTTTGAAGAAAGAAGCTCTTCAA
 
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rJMSF049B23+          GATTTCAGGCATGCCCATGTTCTGGAACCACAGAACAAGATTGCAAAGCTGGCTGAAAAG
rJMSF042O10+          GATTTCAGGCATGCCCATGTTCTGGAACCACAGAACAAGATTGCAAAGCTGGCTGAAAAG
                      ____________________________________________________________
consensus             GATTTCAGGCATGCCCATGTTCTGGAACCACAGAACAAGATTGCAAAGCTGGCTGAAAAG
 
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rJMSF049B23+          AGACTGAAGAAGCTGATTAGTATTTGATACTATATAGCACCGACACAAGAGAGACTATGA
rJMFF035F16+                                                         AGAGAGACTATGA
rJMSF042O10+          AGACTGAAGAAGCTGATTAGTATTTGATACTATATAGCACCGACACAAGAGAGACTATGA
                      ____________________________________________________________
consensus             AGACTGAAGAAGCTGATTAGTATTTGATACTATATAGCACCGACACAAGAGAGACTATGA
 
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rJMSF049B23+          AAACCGACGAGCACTTCCTGCTCCATATGTGAACCTTTTCGGGTAAAAACAGACTCGAAT
rJMFF035F16+          AAACCGACGAGCACTTCCTGCTCCATATGTGAACCTTTTCGGGTAAAAACAGACTCGAAT
rJMSF042O10+          AAACCGACGAGCACTTCCTGCTCCATATGTGAACCTTTTCGGGTAAAAACAGACTCGAAT
                      ____________________________________________________________
consensus             AAACCGACGAGCACTTCCTGCTCCATATGTGAACCTTTTCGGGTAAAAACAGACTCGAAT
 
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rJMSF049B23+          AACAGGTGGATATCGCTGATGACAGATTTACCCTCATGTTTGAGGTTCAGCTGTGTATAT
rJMFF035F16+          AACAGGTGGATATCGCTGATGACAGATTTACCCTCATGTTTGAGGTTCAGCTGTGTATAT
rJMSF042O10+          AACAGGTGGATATCGCTGATGACAGATTTACCCTCATGTTTGAGGTTCAGCTGTGTATAT
                      ____________________________________________________________
consensus             AACAGGTGGATATCGCTGATGACAGATTTACCCTCATGTTTGAGGTTCAGCTGTGTATAT
 
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rJMSF049B23+          AATTGTTGTAATATGACGATGAAT                                    
rJMFF035F16+          AATTGTTGTAATATGACGATGAATCCATGAACCCTGTTTTTTTTTGTGTTGAATCACAAG
rJMSF042O10+          AATTGTTGTAATATGACGATGAATCCATGAACCCTGTTTTTTTTTGTGTTGAATCACAAG
                      ____________________________________________________________
consensus             AATTGTTGTAATATGACGATGAATCCATGAACCCTGTTTTTTTTTGTGTTGAATCACAAG
 
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rJMFF035F16+          CCATGTAGACTGTTGTCTGGTGTGATGAGGCAATTA                        
rJMSF042O10+          CCATGTAGACTGTTGTCTGGTGTGATGAGGCAATTAATGAGATTTTGGCTTTGGTTTGTT
                      ____________________________________________________________
consensus             CCATGTAGACTGTTGTCTGGTGTGATGAGGCAATTAATGAGATTTTGGCTTTGGTTTGTT
 
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rJMSF042O10+          AAGCCTGTTAAAGTGCTATCTGCCCCTAGGCATTAGTATAATGCATGAGAAATTATACTA
                      ____________________________________________________________
consensus             AAGCCTGTTAAAGTGCTATCTGCCCCTAGGCATTAGTATAATGCATGAGAAATTATACTA
 
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rJMSF042O10+          ANGCCCATGTACAGAAGTAGTAGTGTACAGTTTAGTGTTGAGTCTCGGGAGAGTAGGATG
                      ____________________________________________________________
consensus             ANGCCCATGTACAGAAGTAGTAGTGTACAGTTTAGTGTTGAGTCTCGGGAGAGTAGGATG
 
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rJMSF042O10+          AACTTTGAAAAGGATTATACCGCACTCTTCTAGAAGATTGTGCCCAGCATTTCTGAATGT
                      ____________________________________________________________
consensus             AACTTTGAAAAGGATTATACCGCACTCTTCTAGAAGATTGTGCCCAGCATTTCTGAATGT