Contig 012729:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF033B23Sequence567000706 (5)ref|XP_009627757.1|2e-84PREDICTED: mannosyl-oligosaccharide glucosidase GCS1-like isoform X2 [Nicotiana709012729 (2)ref|XP_004239205.1|6e-71PREDICTED: mannosyl-oligosaccharide glucosidase GCS1 [Solanum lycopersicum]
JMSF042L17Sequence795000706 (5)ref|XP_002279616.1|9e-93PREDICTED: mannosyl-oligosaccharide glucosidase GCS1 [Vitis vinifera] emb|CBI276782012729 (2)emb|CDP19898.1|1e-56unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF042L17+                                                                    CT
                      ____________________________________________________________
consensus                                                                       CT
 
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rJMSF042L17+          CCTGTAAAATAGCTCTTACAGTTAGTCGTTTTCCAGTATTTCTCATTTTAGATTTATCGT
                      ____________________________________________________________
consensus             CCTGTAAAATAGCTCTTACAGTTAGTCGTTTTCCAGTATTTCTCATTTTAGATTTATCGT
 
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rJMSF042L17+          GATGTGGATTGACATGTTCACTTGCATACAGGAATCGTGGATATTAGAGAAACAGCTAGA
                      ____________________________________________________________
consensus             GATGTGGATTGACATGTTCACTTGCATACAGGAATCGTGGATATTAGAGAAACAGCTAGA
 
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rJMSF042L17+          CCTGGTTTCAAATAGGAGCACGTTGTGGACAAATTTTGGTCTCAGGTCTCTTTCCAAAAC
                      ____________________________________________________________
consensus             CCTGGTTTCAAATAGGAGCACGTTGTGGACAAATTTTGGTCTCAGGTCTCTTTCCAAAAC
 
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rJMSF042L17+          AAGGTGGTGATACAAACAACTTTTTTTAATGTATAAATGAAAACGCTTTCCCTTAGGCCT
                      ____________________________________________________________
consensus             AAGGTGGTGATACAAACAACTTTTTTTAATGTATAAATGAAAACGCTTTCCCTTAGGCCT
 
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rJMSF033B23+                                                             AGCTCCATT
rJMSF042L17+          GCATTTCATTTACAGAATATATTAATATACATGAGATCTCTCATATGTGACAGCTCCATT
                      ____________________________________________________________
consensus             GCATTTCATTTACAGAATATATTAATATACATGAGATCTCTCATATGTGACAGCTCCATT
 
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rJMSF033B23+          TATATGAAGCGCAACACGGAGCATGATCCTCCATATTGGAGAGGGACGATTTGGATGCAA
rJMSF042L17+          TATATGAAGCGCAACACGGAGCATGATCCTCCATATTGGAGAGGGCCGATTTGGATTCAA
                      ____________________________________________________________
consensus             TATATGAAGCGCAACACGGAGCATGATCCTCCATATTGGAGAGGGCCGATTTGGATTCAA
 
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rJMSF033B23+          TTTAATTACATGACTCTTGGCGCACTTCATCATTACTCCAGAGAGCCTGGACCATACAGA
rJMSF042L17+          TTTAATTACATGACTCTTGGCGCACTTCATCATTACTCCAGAGAGCCTGGACCATACAGA
                      ____________________________________________________________
consensus             TTTAATTACATGACTCTTGGCGCACTTCATCATTACTCCAGAGAGCCTGGACCATACAGA
 
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rJMSF033B23+          GAGAAAGCCAGAACTATCTACCAAGAGCTAAGAAGCAATTTGATAAGAAATGTTGTCGAG
rJMSF042L17+          GAGAAAGCCAGAACTATCTACCAAGAGCTAAGAAGCAATTTGATAAGAAATGTTGTCGAG
                      ____________________________________________________________
consensus             GAGAAAGCCAGAACTATCTACCAAGAGCTAAGAAGCAATTTGATAAGAAATGTTGTCGAG
 
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rJMSF033B23+          AACTATCACAAGACTGGGTATCTGTGGGAGCAATATGATCAGAAGAATGGGAAGGGAAAA
rJMSF042L17+          AACTATCACAAGACTGGGTATCTGTGGGAGCAATATGATCAGAAGAATGGGAAGGGAAAA
                      ____________________________________________________________
consensus             AACTATCACAAGACTGGGTATCTGTGGGAGCAATATGATCAGAAGAATGGGAAGGGAAAA
 
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rJMSF033B23+          GGTGCGCGATTTACCGGCTGGACGGCCCTAGTGCTTCTGATCATGTCTGAATCTTACAAT
rJMSF042L17+          GGTGCGCGATTTACCGGCTGGACGGCCCTAGTGCTTCTGATCATGTCTGAATCTTACAAT
                      ____________________________________________________________
consensus             GGTGCGCGATTTACCGGCTGGACGGCCCTAGTGCTTCTGATCATGTCTGAATCTTACAAT
 
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rJMSF033B23+          GAATGTTAGAGATGGCATATTTCTCAAGGCAGAGTTGAGGTTTCCCTTTAACATATAGAG
rJMSF042L17+          GAATGTTAGAGATGGCATATTTCTCAAGGCAGAGTTGAGGTTTCCCTTTAACATATAGAG
                      ____________________________________________________________
consensus             GAATGTTAGAGATGGCATATTTCTCAAGGCAGAGTTGAGGTTTCCCTTTAACATATAGAG
 
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rJMSF033B23+          CGAGCTACATTTAACTATTTAGGTATGAGATCAATGTTAAGTAGATGCCTGCTTTATCTT
rJMSF042L17+          CGAGCTACATTTAACTATTTAGGTATGAGATCAATGTTAAGTAGATGCCTGCTTTATCTT
                      ____________________________________________________________
consensus             CGAGCTACATTTAACTATTTAGGTATGAGATCAATGTTAAGTAGATGCCTGCTTTATCTT
 
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rJMSF033B23+          CTCTTCCTCCATTTCATACTTGTGGGGAATATACACACCAGAAC                
rJMSF042L17+          CTCTTCCTCCATTTCATACTTGTGGGGAATATACACACCAGAACCAGTACATTTTGAATA
                      ____________________________________________________________
consensus             CTCTTCCTCCATTTCATACTTGTGGGGAATATACACACCAGAACCAGTACATTTTGAATA