Contig 012726:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013P06Sequence526003891 (4)732012726 (8)
JMFS009B06Sequence606012726 (8)
JMSF012M21Sequence468003891 (4)742012726 (8)
JMSF028P19Sequence490012726 (8)439012726 (8)
JMSF031H03Sequence670003891 (4)760012726 (8)
JMSF042B18Sequence642012726 (8)
JMSF048P08Sequence706003891 (4)767012726 (8)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS009B06- CCAATCCCAAACAAAATGAATGCTGACAATGCA
                      ____________________________________________________________
consensus CCAATCCCAAACAAAATGAATGCTGACAATGCA
 
. : . : . : . : . : . :
JMFS009B06- AGGTCTGCAGGTTCCAATAAGGAGAGTACACAGCAAGTTAGGGAGTCTGATCAGAGGCCT
                      ____________________________________________________________
consensus AGGTCTGCAGGTTCCAATAAGGAGAGTACACAGCAAGTTAGGGAGTCTGATCAGAGGCCT
 
. : . : . : . : . : . :
JMFS009B06- AATTGGCCTAACAGGAAAGCCCAAGATGGCAAAGAAGAACATGAGAAGCCTAAATCCAAT
rJMSF048P08+ AT
                      ____________________________________________________________
consensus AATTGGCCTAACAGGAAAGCCCAAGATGGCAAAGAAGAACATGAGAAGCCTAAATCCAAT
 
. : . : . : . : . : . :
JMFS009B06- GATGGAGGGCACATCAAGAAAGGCAATGAAGAGGAGTTTCATGGTTTGGCTAATCCAAAG
rJMSF012M21+ GGCAATGAAGAGGAGTTTCATGGTTTGGCTTATCCAAAG
rJMSF048P08+ GATGGAGGGCACATCCAGAAAGGCAATGAAGAGGAGTTTCATGGTTTGGCTAATCCAAAG
                      ____________________________________________________________
consensus GATGGAGGGCACATCCAGAAAGGCAATGAAGAGGAGTTTCATGGTTTGGCTAATCCAAAG
 
. : . : . : . : . : . :
JMFS009B06- AGTGCACCAGTTGAGGCCACAACACGTATAACCTCGACTCAAGAGGATTCCTCCAAGAAA
rJMSF012M21+ AGTGCACCAGTTGAGGCCACAACACGTATAACCTCGACTCAAGAGGATTCCTCCAAGAAA
rJMSF048P08+ AGTGCACCAGTTGAGGCCACAACACGTATAACCTCGACTCAAGAGGATTCCTCCAAGAAA
rJMFF013P06+ CACAACACGTATAACCTCGACTCAAGAGGATTCCTCCAAGAAA
                      ____________________________________________________________
consensus AGTGCACCAGTTGAGGCCACAACACGTATAACCTCGACTCAAGAGGATTCCTCCAAGAAA
 
. : . : . : . : . : . :
JMFS009B06- CCAAGCAAGAATCAGCATGATAATCTCGACGATGGCAACTCCAAGAAGAGTAGCAGCATA
rJMSF012M21+ CCAAGCAAGAATCAGCATGATAATCTCGACGATGGCAACTCCAAGAAGAGTAGCAGCATA
rJMSF048P08+ CCAAGCAAGAATCAGCATGATAATCTCGACGATGGCAACTCCAAGAAGAGTAGCAGCATA
rJMFF013P06+ CCAAGCAAGAATCAGCATGATAATCTCGACGATGGCAACTCCAAGAAGAGTAGCAGCATA
                      ____________________________________________________________
consensus CCAAGCAAGAATCAGCATGATAATCTCGACGATGGCAACTCCAAGAAGAGTAGCAGCATA
 
. : . : . : . : . : . :
JMFS009B06- ACACCAATCTCATACACCAAAGGTGCTGGCAACACCAAGGCTGCAGATTTCAACGGAAGA
rJMSF012M21+ ACACCAATCTCATACACCAAAGGTGCTGGCAACACCAAGGCTGCAGATTTCAACGGAAGA
rJMSF048P08+ ACACCAATCTCATACACCAAAGGTGCTGGCAACACCAAGGCTGCAGATTTCAACGGAAGA
rJMFF013P06+ ACACCAATCTCATACACCAAAGGTGCTGGCAACACCAAGGCTGCAGATTTCAACGGAAGA
rJMSF031H03+ TTCAACGGAAGA
                      ____________________________________________________________
consensus ACACCAATCTCATACACCAAAGGTGCTGGCAACACCAAGGCTGCAGATTTCAACGGAAGA
 
. : . : . : . : . : . :
JMFS009B06- TGGTACAAACAGCCCGGTTCCACTCTCACCAGCGCCACGAGCAACGTGGACGATCTGATG
rJMSF012M21+ TGGTACAAACAGCCCGGTTCCACTCTCACCAGCGCCACGAGCAACGTGGACGATCTGATG
rJMSF048P08+ TGGTACAAACAGCCCGGTTCCACTCTCACCAGCGCCACGAGCAACGTGGACGATCTGATG
rJMFF013P06+ TGGTACAAACAGCCCGGTTCCACTCTCACCAGCGCCACGAGCAACGTGGACGATCTGATG
rJMSF031H03+ TGGTACAAACAGCCCGGTTCCACTCTCACCAGCGCCACGAGCAACGTGGACGATCTGATG
                      ____________________________________________________________
consensus TGGTACAAACAGCCCGGTTCCACTCTCACCAGCGCCACGAGCAACGTGGACGATCTGATG
 
. : . : . : . : . : . :
JMFS009B06- AAAGTCATCGAGGAAGCTAAAAGAACAGGGGCATATCCTACTGCATCAGAGAAGCCACAC
rJMSF012M21+ AAAGTCATCGAGGAAGCTAAAAGAACAGGGGCATATCCTACTGCATCAGAGAAGCCACAC
rJMSF048P08+ AAAGTCATCGAGGAAGCTAAAAGAACAGGGGCATATCCTACTGCATCAGAGAAGCCACAC
rJMFF013P06+ AAAGTCATCGAGGAAGCTAAAAGAACAGGGGCATATCCTACTGCATCAGAGAAGCCACAC
rJMSF028P19+ AGAAGCCACAC
JMSF028P19- AGAAGCCACAC
rJMSF031H03+ AAAGTCATCGAGGAAGCTAAAAGAACAGGGGCATATCCTACTGCATCAGAGAAGCCACAC
rJMSF042B18+ AAAAGAACAGGGGCATATCCTACTGCATCAGAGAAGCCTCAC
                      ____________________________________________________________
consensus AAAGTCATCGAGGAAGCTAAAAGAACAGGGGCATATCCTACTGCATCAGAGAAGCCACAC
 
. : . : . : . : . : . :
JMFS009B06- TGGAGTGAAATCACCCCGATTCCTCCCCAAGGAGTGCGCGTTAGCGGCCCACAATGGAAC
rJMSF012M21+ TGGAGTGAAATCACCCCGATTCCTCCCCAAGGAGTGCGCGTTAGCGGCCCACAATGGAAC
rJMSF048P08+ TGGAGTGAAATCACCCCGATTCCTCCCCAAGGAGTGCGCGTTAGCGGCCCACAATGGAAC
rJMFF013P06+ TGGAGTGAAATCACCCCGATTCCTCCCCAAGGAGTGCGCGTTAGCGGCCCACAATGGAAC
rJMSF028P19+ TGGAGTGAAATCACCCCGATTCCTCCCCAAGGAGTGCGCGTTAGCGGCCCACAATGGAAC
JMSF028P19- TGGAGTGAAATCACCCCGATTCCTCCCCAAGGAGTGCGCGTTAGCGGCCCACAATGGAAC
rJMSF031H03+ TGGAGTGAAATCACCCCGATTCCTCCCCAAGGAGTGCGCGTTAGCGGCCCACAATGGAAC
rJMSF042B18+ TGGAGTGAAATCACCCCGATTCCTCCCCAAGGAGTGCGCGTTAGCGGCCCACAATGGAAC
                      ____________________________________________________________
consensus TGGAGTGAAATCACCCCGATTCCTCCCCAAGGAGTGCGCGTTAGCGGCCCACAATGGAAC
 
. : . : . : . : . : . :
JMFS009B06- GAAATCACTCCAAATCCTCCAGTAATTGACAGT
rJMSF012M21+ GAAATCACTCCAAATCCTCCAGTAATTGACAGTATGGAAGCAAGGAGGCGATATACTACT
rJMSF048P08+ GAAATCACTCCAAATCCTCCAGTAATTGACAGTATGGAAGCAAGGAGGCGATATACTACT
rJMFF013P06+ GAAATCACTCCAAATCCTCCAGTAATTGACAGTATGGAAGCAAGGAGGCGATATACTACT
rJMSF028P19+ GAAATCACTCCAAATCCTCCAGTAATTGACAGTATGGAAGCAAGGAGGCGATATACTACT
JMSF028P19- GAAATCACTCCAAATCCTCCAGTAATTGACAGTATGGAAGCAAGGAGGCGATATACTACT
rJMSF031H03+ GAAATCACTCCAAATCCTCCAGTAATTGACAGTATGGAAGCAAGGAGGCGATATACTACT
rJMSF042B18+ GAAATCACTCCAAATCCTCCAGTAATTGACAGTATGGAAGCAAGGAGGCGATATACTACT
                      ____________________________________________________________
consensus GAAATCACTCCAAATCCTCCAGTAATTGACAGTATGGAAGCAAGGAGGCGATATACTACT
 
. : . : . : . : . : . :
rJMSF012M21+ GGGTATCCACAGCCAGTTGCAGCAGCACCTATGGGTATGGGATTTTATGGAGGAGCTCTT
rJMSF048P08+ GGGTATCCACAGCCAGTTGCAGCAGCACCTATGGGTATGGGATTTTATGGAGGAGCTCTT
rJMFF013P06+ GGGTATCCACAGCCAGTTGCAGCAGCACCTATGGGTATGGGATTTTATGGAGGAGCTCTT
rJMSF028P19+ GGGTATCCACAGCCAGTTGCAGCAGCACCTATGGGTATGGGATTTTATGGAGGAGCTCTT
JMSF028P19- GGGTATCCACAGCCAGTTGCAGCAGCACCTATGGGTATGGGATTTTATGGAGGAGCTCTT
rJMSF031H03+ GGGTATCCACAGCCAGTTGCAGCAGCACCTATGGGTATGGGATTTTATGGAGGAGCTCTT
rJMSF042B18+ GGGTATCCACAGCCAGTTGCAGCAGCACCTATGGGTATGGGATTTTATGGAGGAGCTCTT
                      ____________________________________________________________
consensus GGGTATCCACAGCCAGTTGCAGCAGCACCTATGGGTATGGGATTTTATGGAGGAGCTCTT
 
. : . : . : . : . : . :
rJMSF012M21+ AATAGTGAAGATGCTGTGAGGATATATGGTGGCACCTTCCTACCTAACTAATCAGGAAAA
rJMSF048P08+ AATAGTGAAGATGCTGTGAGGATATATGGTGGCACCTTCCTACCTAACTAATCAGGAAAA
rJMFF013P06+ AATAGTGAAGATGCTGTGAGGATATATGGTGGCACCTTCCTACCTAACTAATCAGGAAAA
rJMSF028P19+ AATAGTGAAGATGCTGTGAGGATATATGGTGGCACCTTCCTACCTAACTAATCAGGAAAA
JMSF028P19- AATAGTGAAGATGCTGTGAGGATATATGGTGGCACCTTCCTACCTAACTAATCAGGAAAA
rJMSF031H03+ AATAGTGAAGATGCTGTGAGGATATATGGTGGCACCTTCCTACCTAACTAATCAGGAAAA
rJMSF042B18+ AATAGTGAAGATGCTGTGAGGATATATGGTGGCACCTTCCTACCTAACTAATCAGGAAAA
                      ____________________________________________________________
consensus AATAGTGAAGATGCTGTGAGGATATATGGTGGCACCTTCCTACCTAACTAATCAGGAAAA
 
. : . : . : . : . : . :
rJMSF012M21+ CTTGCCCACATCCAATTGCTGGCAACTGTGGCTGTGTTATCTCACTTATCTGCATATAGT
rJMSF048P08+ CTTGCCCACATCCAATTGCTGGCAACTGTGGCTGTGTTATCTCACTTATCTGCATATAGT
rJMFF013P06+ CTTGCCCACATCCAATTGCTGGCAACTGTGGCTGTGTTATCTCACTTATCTGCATATAGT
rJMSF028P19+ CTTGCCCACATCCAATTGCTGGCAACTGTGGCTGTGTTATCTCACTTATCTGCATATAGT
JMSF028P19- CTTGCCCACATCCAATTGCTGGCAACTGTGGCTGTGTTATCTCACTTATCTGCATATAGT
rJMSF031H03+ CTTGCCCACATCCAATTGCTGGCAACTGTGGCTGTGTTATCTCACTTATCTGCATATAGT
rJMSF042B18+ CTTGCCCACATCCAATTGCTGGCAACTGTGGCTGTGTTATCTCACTTATCTGCATATAGT
                      ____________________________________________________________
consensus CTTGCCCACATCCAATTGCTGGCAACTGTGGCTGTGTTATCTCACTTATCTGCATATAGT
 
. : . : . : . : . : . :
rJMSF012M21+ TTCTAGCTACCAATATGACACTAGTTGCATATGAAAATTAAACCAAAAAGTGTGTGTTTA
rJMSF048P08+ TTCTAGCTACCAATATGACACTAGTTGCATATGAAAATTAAACCAAAAAGTGTGTGTTTA
rJMFF013P06+ TTCTAGCTACCAATATGACACTAGTTGCATATGAAAATTAAACCAAAAAGTGTGTGTTTA
rJMSF028P19+ TTCTAGCTACCAATATGACACTAGTTGCATATGAAAATTAAACCAAAAAGTGTGTGTTTA
JMSF028P19- TTCTAGCTACCAATATGACACTAGTTGCATATGAAAATTAAACCAAAAAGTGTGTGTTTA
rJMSF031H03+ TTCTAGCTACCAATATGACACTAGTTGCATATGAAAATTAAACCAAAAAGTGTGTGTTTA
rJMSF042B18+ TTCTAGCTACCAATATGACACTAGTTGCATATGAAAATTAAACCAAAAAGTGTGTGTTTA
                      ____________________________________________________________
consensus TTCTAGCTACCAATATGACACTAGTTGCATATGAAAATTAAACCAAAAAGTGTGTGTTTA
 
. : . : . : . : . : . :
rJMSF012M21+ ATCTGTGCTAAGATGTTTTACTGTTTGAGTACTTGATCAAATA
rJMSF048P08+ ATCTGTGCTAAGATGTTTTACTGTTTGAGTACTTGATCAAATACT
rJMFF013P06+ ATCTGTGCTAAGATGTTTTACTGTTTGAGTACTTGATCAAATACTGTGTGATGCTTGAAT
rJMSF028P19+ ATCTGTGCTAAGATGTTTTACTGTTTGAGTACTTGATCAAATACTGTGTGATGCTTGAAT
JMSF028P19- ATCTGTGCTAAGATGTTTTACTGTTTGAGTACTTGATCAAATACTGTGTGATGCTTGAAT
rJMSF031H03+ ATCTGTGCTAAGATGTTTTACTGTTTGAGTACTTGATCAAATACTGTGTGATGCTTGAAT
rJMSF042B18+ ATCTGTGCTAAGATGTTTTACTGTTTGAGTACTTGATCAAATACTGTGTGATGCTTGGAT
                      ____________________________________________________________
consensus ATCTGTGCTAAGATGTTTTACTGTTTGAGTACTTGATCAAATACTGTGTGATGCTTGAAT
 
. : . : . : . : . : . :
rJMFF013P06+ AAATGTAATGTATT
rJMSF028P19+ AAATGTAA
JMSF028P19- AAATGTAATGTATTTGTTCTCTCAGGGATATAACCATAGAAAATTGTGTA
rJMSF031H03+ AAATGTAATGTATTTGTTCTCTCAGGGATATAACCATAGAAAATTGTGTATCCCATGTTC
rJMSF042B18+ AAATGTAATGTATTTGTTCTCTCAGGGATATAACCATAGAAAATTGTGTATCCCATGTTC
                      ____________________________________________________________
consensus AAATGTAATGTATTTGTTCTCTCAGGGATATAACCATAGAAAATTGTGTATCCCATGTTC
 
. : . : . : . : . : . :
rJMSF031H03+ GTGGTCAGGCCGGTCAATAGGGGTTAAAAACCTA-CAAACGCCGTCTGTGGGGATCGAAC
rJMSF042B18+ GTGGTCAGGCCGGTCAATAGGGGTTAAAAACCTATCAAACGCCGTCTGTGGGGATCGAAC
                      ____________________________________________________________
consensus GTGGTCAGGCCGGTCAATAGGGGTTAAAAACCTATCAAACGCCGTCTGTGGGGATCGAAC
 
. : . : . : . : . : . :
rJMSF031H03+ CCACGACCA-CGTGGTTAAAAGCCACGCGCTCTACCACTGAGCTAAGA
rJMSF042B18+ CCACGACCANCGTGGTTAAAAGCCACGCGCTCTACCACTGAGCTAAGAACGGCTGATGAC
                      ____________________________________________________________
consensus CCACGACCANCGTGGTTAAAAGCCACGCGCTCTACCACTGAGCTAAGAACGGCTGATGAC