Contig 012722:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF049G09-                                                                     GA
JMSF041J12-                                                                     GA
                      ____________________________________________________________
consensus                                                                       GA
 
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JMSF049G09-           GTCCACACTCCATAGCCGCCATATTTCGGAGGCAAGACCTCAATACTTTCTGTCGAAGTA
JMSF041J12-           GTCCACACTCCATAGCCGCCATATTTCGGAGGCAAGACCTCAATACTTTCTGTCGAAGTA
                      ____________________________________________________________
consensus             GTCCACACTCCATAGCCGCCATATTTCGGAGGCAAGACCTCAATACTTTCTGTCGAAGTA
 
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JMSF049G09-           GAACTCCGACTTGGACCTTTCGAACAAACAATTTGTCCCAACATGAACTTAATTACAGGT
JMSF041J12-           GAACTCCGACTTGGACCTTTCGAACAAACAATTTGTCCCAACATGAACTTAATTACAGGT
                      ____________________________________________________________
consensus             GAACTCCGACTTGGACCTTTCGAACAAACAATTTGTCCCAACATGAACTTAATTACAGGT
 
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JMSF049G09-           TGCCATTTCAAGGTGAGGTACGTCAGCCCGGACATCTCCGTTTCAAAGCAAATCAGTACA
JMSF041J12-           TGCCATTTCAAGGTGAGGTACGTCAGCCCGGACATCTCCGTTTCAAAGCAAATCAGTACA
                      ____________________________________________________________
consensus             TGCCATTTCAAGGTGAGGTACGTCAGCCCGGACATCTCCGTTTCAAAGCAAATCAGTACA
 
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JMSF049G09-           AGGAGTGGTGATAGGTTTAGCAGGGTCATTTGCCGCCATAGCCATCGCCTTTCATTCCTC
JMSF041J12-           AGGAGTGGTGATAGGTTTAGCAGGGTCATTTGCCGCCATAGCCATCGCCTTTCATTCCTC
                      ____________________________________________________________
consensus             AGGAGTGGTGATAGGTTTAGCAGGGTCATTTGCCGCCATAGCCATCGCCTTTCATTCCTC
 
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JMSF049G09-           CGCCGCCGTACACATCACCTTTCATCCTTGTTTCGCCCCTACCAATGTATCTATAATCCC
JMSF041J12-           CGCCGCCGTACACATCACCTTTCATCCTTGTTTCGCCCCTACCAATGTATCTATAATCCC
                      ____________________________________________________________
consensus             CGCCGCCGTACACATCACCTTTCATCCTTGTTTCGCCCCTACCAATGTATCTATAATCCC
 
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JMSF049G09-           TGCCGACCCCTTATAGCTAGTGCGAGGAAGAGAAACTCGAAGTCGGAGCCAATTCTCTCG
JMSF041J12-           TGCCGACCCCTTATAGCTAGTGCGAGGAAGAGAAACTCGAAGTCGGAGCCAATTCTCTCG
                      ____________________________________________________________
consensus             TGCCGACCCCTTATAGCTAGTGCGAGGAAGAGAAACTCGAAGTCGGAGCCAATTCTCTCG
 
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JMSF049G09-           CCTTCCATCGTTGAACAAGTGTTGAAGAATGACGACGAAGACGAAGACAAATTTCTTGCT
JMSF041J12-           CCTTCCATCGTTGAACAAGTGTTGAAGAATGACGACGAAGACGAAGACAAATTTCTTGCT
rJMSF041J12+                                                  ACGAAGACAAATTTCTTGCT
                      ____________________________________________________________
consensus             CCTTCCATCGTTGAACAAGTGTTGAAGAATGACGACGAAGACGAAGACAAATTTCTTGCT
 
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JMSF049G09-           GAGGACTTTGAAGACGAGGAGCTGCTGGAGGATGATAATGATGATGATTTCTTTTATGAT
JMSF041J12-           GAGGACTTTGAAGACGAGGAGCTGCTGGAGGATGATAATGATGATGATTTCTTTTATGAT
rJMSF049G09+                              GCTGCTGGAGGATGATAATGATGATGATTTCTTTTATGAT
rJMSF041J12+          GAGGACTTTGAAGACGAGGAGCTGCTGGAGGATGATAATGATGATGATTTCTTTTATGAT
                      ____________________________________________________________
consensus             GAGGACTTTGAAGACGAGGAGCTGCTGGAGGATGATAATGATGATGATTTCTTTTATGAT
 
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JMSF049G09-           GAGAG-TTTTGAGGAAGATGCTAAACTCTTTTTTGGCGATGGATCTGGAGGAGGTGGAAT
JMSF041J12-           GAGAG-TTTTGAGGAAGATGCTAAACTCTTTTTTGGCGATGGATCTGGAGGAGGTGGAAT
rJMSF049G09+          GAGAG-TTTTGAGGAAGATGCTAAACTCTTTTTTGGCGATGGATCTGGAGGAGGTGGAAT
rJMSF041J12+          GAGAGTTTTTGAGGAAGATGCTAAACTCTTTTTTGGCGATGGATCTGGAGGAGGTGGAAT
                      ____________________________________________________________
consensus             GAGAG-TTTTGAGGAAGATGCTAAACTCTTTTTTGGCGATGGATCTGGAGGAGGTGGAAT
 
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JMSF049G09-           TGCTCTTGCTGGGACACCATGGGACAAAAAAGCATTAGAAATTGCTGAAGAAGTTGCTCT
JMSF041J12-           TGCTCTTGCTGGGACACCATGGGACAAAAAAGCATTAGAAATTGCTGAAGAAGTTGCTCT
rJMSF049G09+          TGCTCTTGCTGGGACACCATGGGACAAAAAAGCATTAGAAATTGCTGAAGAAGTTGCTCT
rJMSF041J12+          TGCTCTTGCTGGGACACCATGGGACAAAAAAGCATTAGAAATTGCTGAAGAAGTTGCTCT
                      ____________________________________________________________
consensus             TGCTCTTGCTGGGACACCATGGGACAAAAAAGCATTAGAAATTGCTGAAGAAGTTGCTCT
 
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JMSF049G09-           ATCATTTGATGGAGAATTGGGAATATATGCCTTTAA                        
JMSF041J12-           ATCATTTGATGGAGAATTGGGAATATATGCCTTTAAGACGCAAAAAAATGCCCACATTGA
rJMSF049G09+          ATCATTTGATGGAGAATTGGGAATATATGCCTTTAAGACGCAAAAAAATGCCCACATTGA
rJMSF041J12+          ATCATTTGATGGAGAATTGGGAATATATGCCTTTAAGACGCAAAAAAATGCCCACATTGA
                      ____________________________________________________________
consensus             ATCATTTGATGGAGAATTGGGAATATATGCCTTTAAGACGCAAAAAAATGCCCACATTGA
 
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JMSF041J12-           AGTGCGAGTGGAGAGACTCACGAACAAATCAGGTTCTCCTAGTATGGCAGACATTGAAGC
rJMSF049G09+          AGTGCGAGTGGAGAGACTCACGAACAAATCAGGTTCTCCTAGTATGGCAGACATTGAAGC
rJMSF041J12+          AGTGCGAGTGGAGAGACTCACGAACAAATCAGGTTCTCCTAGTATGGCAGACATTGAAGC
                      ____________________________________________________________
consensus             AGTGCGAGTGGAGAGACTCACGAACAAATCAGGTTCTCCTAGTATGGCAGACATTGAAGC
 
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JMSF041J12-           TTTCTCATCAGCTTACAGAGCACGGCTTGATGAA                          
rJMSF049G09+          TTTCTCATCAGCTTACAGAGCACGGCTTGATGAAGCTGAGTCCTTAGGATCTATTCCAAA
rJMSF041J12+          TTTCTCATCAGCTTACAGAGCACGGCTTGATGAAGCTGAGTCCTTAGGATCTATTCCAAA
                      ____________________________________________________________
consensus             TTTCTCATCAGCTTACAGAGCACGGCTTGATGAAGCTGAGTCCTTAGGATCTATTCCAAA
 
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rJMSF049G09+          TAACTTATCCCTGGAGGTATCTTCACCTGGTGTGGAGAGGGTTGTTAGGGTCCCAGAAGA
rJMSF041J12+          TAACTTATCCCTGGAGGTATCTTCACCTGGTGTGGAGAGGGTTGTTAGGGTCCCAGAAGA
                      ____________________________________________________________
consensus             TAACTTATCCCTGGAGGTATCTTCACCTGGTGTGGAGAGGGTTGTTAGGGTCCCAGAAGA
 
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rJMSF049G09+          TCTTGATCGGTTCAAGGAACGTCCCATGTATGTAAAGTATGTGAGTGAAGGAATCAAGAG
rJMSF041J12+          TCTTGATCGGTTCAAGGAACGTCCCATGTATGTAAAGTATGTGAGTGAAGGAATCAAGAG
                      ____________________________________________________________
consensus             TCTTGATCGGTTCAAGGAACGTCCCATGTATGTAAAGTATGTGAGTGAAGGAATCAAGAG
 
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rJMSF049G09+          TGGCATGCCTACTGAACACGATGGTGTATTCAGGCTCGAGTCCTTCGATTTGGAAACAAG
rJMSF041J12+          TGGCATGCCTACTGAACACGATGGTGTATTCAGGCTCGAGTCCTTCGATTTGGAAACAAG
                      ____________________________________________________________
consensus             TGGCATGCCTACTGAACACGATGGTGTATTCAGGCTCGAGTCCTTCGATTTGGAAACAAG
 
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rJMSF049G09+          TGTATGCACATGGGGATTAGCCGACGTAAGGGTTAACCGAGAAAAAGCAGGGAAAGGAAG
rJMSF041J12+          TGTATGCACATGGGGATTAGCCGACGTAAGGGTTAACCGAGAAAAAGCAGGGAAAGGAAG
                      ____________________________________________________________
consensus             TGTATGCACATGGGGATTAGCCGACGTAAGGGTTAACCGAGAAAAAGCAGGGAAAGGAAG
 
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rJMSF049G09+          GCCCCTTAGCAAGAAGCAAAGGGAGTGGCGGTTAGACACGCCATTCGATTCTCTCCTTAT
rJMSF041J12+          GCCCCTTAGCAAGAAGCAAAGGGAGTGGCGGTTAGACACGCCATTCGATTCTCTCCTTAT
                      ____________________________________________________________
consensus             GCCCCTTAGCAAGAAGCAAAGGGAGTGGCGGTTAGACACGCCATTCGATTCTCTCCTTAT
 
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rJMSF049G09+          GGTCCGGTTGCATTCAGAAATGTAACCATTGGGGTTAAATTTTGTATTCTTTAATGTGAT
rJMSF041J12+          GGTCCGGTTGCATTCAGAAATGTAACCATTGGGGTTAAATTTTGTATTCTTTAATGTGAT
                      ____________________________________________________________
consensus             GGTCCGGTTGCATTCAGAAATGTAACCATTGGGGTTAAATTTTGTATTCTTTAATGTGAT
 
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rJMSF049G09+          TGCAGAATATTAGGAACTAACTCAAGTTTGAAGAAGACACGCCAGAATGAAGTTA     
rJMSF041J12+          TGCAGAATATTAGGAACTAACTCAAGTTTGAAGAAGACACGCCAGAATGAAGTTATATAA
                      ____________________________________________________________
consensus             TGCAGAATATTAGGAACTAACTCAAGTTTGAAGAAGACACGCCAGAATGAAGTTATATAA