Contig 012718:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF018F08-                                 TCGCAGAAGAGCTAGCTAGTGACTTTAGTGAGCGGTTC
JMSF040J14-                           TTGAGATCGCAGAAGAGCTAGCTAGTGACTTTAGTGAGCGGTTC
                      ____________________________________________________________
consensus                             TTGAGATCGCAGAAGAGCTAGCTAGTGACTTTAGTGAGCGGTTC
 
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JMSF018F08-           CTCAGGAAGAAGAAGAAGAAGAAGAGAGAGAGAGATATAGAGAGAGAATATGGCGAGGAG
JMSF040J14-           CTCAGGAAGAAGAAGAAGAAGAAGAGAGAGAGAGATATAGAGAGAGAATATGGCGAGGAG
                      ____________________________________________________________
consensus             CTCAGGAAGAAGAAGAAGAAGAAGAGAGAGAGAGATATAGAGAGAGAATATGGCGAGGAG
 
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JMSF018F08-           ACCGGACGAGGAATACGATTACTTGTTCAAGGTTGTGTTAATCGGCGATTCCGGAGTAGG
JMSF040J14-           ACCGGACGAGGAATACGATTACTTGTTCAAGGTTGTGTTAATCGGCGATTCCGGAGTAGG
rJMSF040J14+          ACCGGACGAGGAATACGATTACTTGTTCAAGGTTGTGTTAATCGGCGATTCCGGAGTAGG
                      ____________________________________________________________
consensus             ACCGGACGAGGAATACGATTACTTGTTCAAGGTTGTGTTAATCGGCGATTCCGGAGTAGG
 
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JMSF018F08-           TAAATCCAACTTGCTATCCCGATTTACCAGAAACGAGTTCTGCTTGGAGTCCAAGTCCAC
JMSF040J14-           TAAATCCAACTTGCTATCCCGATTTACCAGAAACGAGTTCTGCTTGGAGTCCAAGTCCAC
rJMSF040J14+          TAAATCCAACTTGCTATCCCGATTTACCAGAAACGAGTTCTGCTTGGAGTCCAAGTCCAC
                      ____________________________________________________________
consensus             TAAATCCAACTTGCTATCCCGATTTACCAGAAACGAGTTCTGCTTGGAGTCCAAGTCCAC
 
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JMSF018F08-           CATCGGAGTTGAATTCTCCACTCGTACTCTTCAGGTTGAGGGAAG               
JMSF040J14-           CATCGGAGTTGAATTCGCCACTCGTACTCTTCAGGTTGAGGGAAGGACGGTGAAGGCTCA
rJMSF018F08+                                  TACTCTTCAGGTTGAGGGAAGGACGGTGAAGGCTCA
rJMSF040J14+          CATCGGAGTTGAATTCGCCACTCGTACTCTTCAGGTTGAGGGAAGGACGGTGAAGGCTCA
                      ____________________________________________________________
consensus             CATCGGAGTTGAATTCGCCACTCGTACTCTTCAGGTTGAGGGAAGGACGGTGAAGGCTCA
 
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JMSF040J14-           GATATGGGACACGGCTGGCCAGGAGAGATATCGAGCCATAACAAGTGCATATTATAGGGG
rJMSF018F08+          GATATGGGACACGGCTGGCCAGGAGAGATATCGAGCCATAACAAGTGCATATTATAGGGG
rJMSF040J14+          GATATGGGACACGGCTGGCCAGGAGAGATATCGAGCCATAACAAGTGCATATTATAGGGG
                      ____________________________________________________________
consensus             GATATGGGACACGGCTGGCCAGGAGAGATATCGAGCCATAACAAGTGCATATTATAGGGG
 
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JMSF040J14-           TGCTCTCGGGGCTCTTTTAGTTTATGATGTGACAAAACCAACAACCTTTGAAAATGTTAG
rJMSF018F08+          TGCTCTCGGGGCTCTTTTAGTTTATGATGTGACAAAACCAACAACCTTTGAAAATGTTAG
rJMSF040J14+          TGCTCTCGGGGCTCTTTTAGTTTATGATGTGACAAAACCAACAACCTTTGAAAATGTTAG
                      ____________________________________________________________
consensus             TGCTCTCGGGGCTCTTTTAGTTTATGATGTGACAAAACCAACAACCTTTGAAAATGTTAG
 
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JMSF040J14-           CCGTTGGTTGAAGGAGCTGAGAGACCACGCAGATTCAAACATTGTGATCATGCTCATTGG
rJMSF018F08+          CCGTTGGTTGAAGGAGCTGAGAGACCACGCAGATTCAAACATTGTGATCATGCTCATTGG
rJMSF040J14+          CCGTTGGTTGAAGGAGCTGAGAGACCACGCAGATTCAAACATTGTGATCATGCTCATTGG
                      ____________________________________________________________
consensus             CCGTTGGTTGAAGGAGCTGAGAGACCACGCAGATTCAAACATTGTGATCATGCTCATTGG
 
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JMSF040J14-           GAATAAGGCCGATCTAAGCCATCTTCGAGCAGTTGCCACAGAGGATGCTCAAAGTTACGC
rJMSF018F08+          GAATAAGGCCGATCTAAGCCATCTTCGAGCAGTTGCCACAGAGGATGCTCAAAGTTACGC
rJMSF040J14+          GAATAAGGCCGATCTAAGCCATCTTCGAGCAGTTGCCACAGAGGATGCTCAAAGTTACGC
                      ____________________________________________________________
consensus             GAATAAGGCCGATCTAAGCCATCTTCGAGCAGTTGCCACAGAGGATGCTCAAAGTTACGC
 
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JMSF040J14-           TGAAAGGGAAGGCCTCTCGTTCATTGAAACATCAGCTTTGGAGGCAACTAATGTAGAGAA
rJMSF018F08+          TGAAAGGGAAGGCCTCTCGTTCATTGAAACATCAGCTTTGGAGGCAACTAATGTAGAGAA
rJMSF040J14+          TGAAAGGGAAGGCCTCTCGTTCATTGAAACATCAGCTTTGGAGGCAACTAATGTAGAGAA
                      ____________________________________________________________
consensus             TGAAAGGGAAGGCCTCTCGTTCATTGAAACATCAGCTTTGGAGGCAACTAATGTAGAGAA
 
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JMSF040J14-           GTCATTCCAGATGATTCTATCAGAAATCTATCGGACAATTAGTAAGAAGTCGCTTTCTTC
rJMSF018F08+          GTCATTCCAGATGATTCTATCAGAAATCTATCGGACAATTAGTAAGAAGTCGCTTTCTTC
rJMSF040J14+          GTCATTCCAGATGATTCTATCAGAAATCTATCGGACAATTAGTAAGAAGTCGCTTTCTTC
                      ____________________________________________________________
consensus             GTCATTCCAGATGATTCTATCAGAAATCTATCGGACAATTAGTAAGAAGTCGCTTTCTTC
 
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rJMSF018F08+          AGAGGAGCCAGCAGCTGCTATCAAAGAAGGGAAGACTCTTGTTGTTGATGCACAAGAGGC
rJMSF040J14+          AGAGGAGCCAGCAGCTGCTATCAAAGAAGGGAAGACTCTTGTTGTTGATGCACAAGAGGC
                      ____________________________________________________________
consensus             AGAGGAGCCAGCAGCTGCTATCAAAGAAGGGAAGACTCTTGTTGTTGATGCACAAGAGGC
 
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rJMSF018F08+          TAACGCAAAAAAACCTTGCTGCTCTTCATCCTAATGGTCATTGGCGCTTTTTTCCTCTCA
rJMSF040J14+          TAACGCAAAAAAACCTTGCTGCTCTTCATCCTAATGGTCATTGGCGCTTTTTTCCTCTCA
                      ____________________________________________________________
consensus             TAACGCAAAAAAACCTTGCTGCTCTTCATCCTAATGGTCATTGGCGCTTTTTTCCTCTCA
 
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rJMSF018F08+          ATTTCTTCTTTTATTATTCCTATTTGCGCCAATTGTTCGAGCTTTTGTATTTTTTTACCA
rJMSF040J14+          ATTTCTTCTTTTATTATTCCTATTTGCGCCAATTGTTCGAGCTTTTGTATTTTTTTACCA
                      ____________________________________________________________
consensus             ATTTCTTCTTTTATTATTCCTATTTGCGCCAATTGTTCGAGCTTTTGTATTTTTTTACCA
 
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rJMSF018F08+          TTCCTGTTGTTGTTGTTGTATTATTAATATGACCTTTTTGGTTGAGCTGAGTGCTACTTG
rJMSF040J14+          TTCCTGTTGTTGTTGTTGTATTATTAATATGACCTTTTTGGTTGAGCTGAGTGCTACTTG
                      ____________________________________________________________
consensus             TTCCTGTTGTTGTTGTTGTATTATTAATATGACCTTTTTGGTTGAGCTGAGTGCTACTTG
 
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rJMSF018F08+          AGGCTTTATATGCGAATTGTTTGAGGCTTGTCTATTAGTAGTGCAGTTCATACCTGGCTG
rJMSF040J14+          AGGCTTTATATGCGAATTGTTTGAGGCTTGTCTATTAGTAGTGCAGTTCATACCTGGCTG
                      ____________________________________________________________
consensus             AGGCTTTATATGCGAATTGTTTGAGGCTTGTCTATTAGTAGTGCAGTTCATACCTGGCTG
 
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rJMSF018F08+          CTAGCTTTAATTATATTGTGAAGAATGCAGGCACTTTGCTTGGTGTACTGCAAAAGATA 
rJMSF040J14+          CTAGCTTTAATTATATTGTGAAGAATGCAGGCACTTTGCTTGGTGTACTGCAAAAGATAT
                      ____________________________________________________________
consensus             CTAGCTTTAATTATATTGTGAAGAATGCAGGCACTTTGCTTGGTGTACTGCAAAAGATAT