Contig 012717:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF040I14Sequence876012717 (2)ref|XP_011078391.1|5e-118PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase
JMSF047O22Sequence698012717 (2)ref|XP_011078391.1|6e-89PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF047O22+ TCGCCG
rJMSF040I14+ CGGAGCAGCGTGTGGCCATGAATCAGTTGCTTCGCCG
                      ____________________________________________________________
consensus CGGAGCAGCGTGTGGCCATGAATCAGTTGCTTCGCCG
 
. : . : . : . : . : . :
rJMSF047O22+ GGCAGGTATCTCCAATGGTGACCTTCTTATTATGTCAGATACCGATGAAATCCCGAGCCA
rJMSF040I14+ GGCAGGTATCTCCAATGGTGACCTTCTTATTATGTCAGATACCGATGAAATCCCGAGCCA
                      ____________________________________________________________
consensus GGCAGGTATCTCCAATGGTGACCTTCTTATTATGTCAGATACCGATGAAATCCCGAGCCA
 
. : . : . : . : . : . :
rJMSF047O22+ CCATACCATAAAATTACTCCAGTGGTGCGACGGGGTGCCCCCCCGTTCTGCATCTCGAGC
rJMSF040I14+ CCATACCATAAAATTACTCCAGTGGTGCGACGGGGTG-CCCCCCGTTCTGCATCTCGAGC
                      ____________________________________________________________
consensus CCATACCATAAAATTACTCCAGTGGTGCGACGGGGTGCCCCCCCGTTCTGCATCTCGAGC
 
. : . : . : . : . : . :
rJMSF047O22+ TGAGGCACTACTTGTACTCCTTCGAGTTCCCCGTGGACTATAGCAGCTGGCGTGCCACGG
rJMSF040I14+ TGAGGCACTACTTGTACTCCTTCGAGTTCCCCGTGGACTATAGCAGCTGGCGTGCCACGG
                      ____________________________________________________________
consensus TGAGGCACTACTTGTACTCCTTCGAGTTCCCCGTGGACTATAGCAGCTGGCGTGCCACGG
 
. : . : . : . : . : . :
rJMSF047O22+ TCCACATTTACAGCCCGTGGACTCAATATCGACACTCCCGCCAGACCGACCGCATCCTCT
rJMSF040I14+ TCCACATTTACAGCCCGTGGACTCAATATCGACACTCCCGCCAGACCGACCGCATCCTCT
                      ____________________________________________________________
consensus TCCACATTTACAGCCCGTGGACTCAATATCGACACTCCCGCCAGACCGACCGCATCCTCT
 
. : . : . : . : . : . :
rJMSF047O22+ CGGATGCGGGATGGCACTGCAGCTTCTGCTTCCGCTACCTCAAGGATTTCGTGTTCAAGA
rJMSF040I14+ CGGATGCGGGATGGCACTGCAGCTTCTGCTTCCGCTACCTCAAGGATTTCGTGTTCAAGA
                      ____________________________________________________________
consensus CGGATGCGGGATGGCACTGCAGCTTCTGCTTCCGCTACCTCAAGGATTTCGTGTTCAAGA
 
. : . : . : . : . : . :
rJMSF047O22+ TGACAGCATATAGCCACGCAGACCGAGTAAAGCACCGAGAGTTTCTCGACCATACGAGGA
rJMSF040I14+ TGACAGCATATAGCCACGCAGACCGAGTAAAGCACCGAGAGTTTCTCGACCATACGAGGA
                      ____________________________________________________________
consensus TGACAGCATATAGCCACGCAGACCGAGTAAAGCACCGAGAGTTTCTCGACCATACGAGGA
 
. : . : . : . : . : . :
rJMSF047O22+ TCCAGAACCTCATCTGTCAAGGCTCTGATCTTTACGACATGTTGCCCGAGGAATATACCT
rJMSF040I14+ TCCAGAACCTCATCTGTCAAGGCTCTGATCTTTACGACATGTTGCCCGAGGAATATACCT
                      ____________________________________________________________
consensus TCCAGAACCTCATCTGTCAAGGCTCTGATCTTTACGACATGTTGCCCGAGGAATATACCT
 
. : . : . : . : . : . :
rJMSF047O22+ TCAAAGAATTGATCAAGAAAATGGGATCTGTTCCTCCTTCAGCCTCTGCAGTTCACCTCC
rJMSF040I14+ TCAAAGAATTGATCAAGAAAATGGGATCTGTTCCTCCTTCAGCCTCTGCAGTTCACCTCC
                      ____________________________________________________________
consensus TCAAAGAATTGATCAAGAAAATGGGATCTGTTCCTCCTTCAGCCTCTGCAGTTCACCTCC
 
. : . : . : . : . : . :
rJMSF047O22+ CCGCTTATCTGATCGAAAATGCTGACGTTTTCAGATTCCTCCTCCCGGGAGGTTGTATGC
rJMSF040I14+ CCGCTTATCTGATCGAAAATGCTGACGTTTTCAGATTCCTCCTCCCGGGAGGTTGTATGC
                      ____________________________________________________________
consensus CCGCTTATCTGATCGAAAATGCTGACGTTTTCAGATTCCTCCTCCCGGGAGGTTGTATGC
 
. : . : . : . : . : . :
rJMSF047O22+ GCCCGCCAGCATGATTTCCAGTTTTACGGTAAACACCGTTTTGATGATCTCTGTAACAGT
rJMSF040I14+ GCCCGCCAGCATGATTTCCAGTTTTACGGTAAACACCGTTTTGATGATCTCTGTAACAGT
                      ____________________________________________________________
consensus GCCCGCCAGCATGATTTCCAGTTTTACGGTAAACACCGTTTTGATGATCTCTGTAACAGT
 
. : . : . : . : . : . :
rJMSF047O22+ TGCATTGTTGTTAGGAAAAACATTTTAGGTTGTATTCCAACTTAGAATCCTCATTTAACT
rJMSF040I14+ TGCATTGTTGTTAGGAAAAACATTTTAGGTTGTATTCCAACTTAGAATCCTCATTTAACT
                      ____________________________________________________________
consensus TGCATTGTTGTTAGGAAAAACATTTTAGGTTGTATTCCAACTTAGAATCCTCATTTAACT
 
. : . : . : . : . : . :
rJMSF047O22+ TTTTTCTTTTCACTTATATGTTGAGCATCCTA
rJMSF040I14+ TTTTTCTTTTCACTTATATGTTGAGCATCCTATACAATCTCAGGATGGAGAAGTATATGA
                      ____________________________________________________________
consensus TTTTTCTTTTCACTTATATGTTGAGCATCCTATACAATCTCAGGATGGAGAAGTATATGA
 
. : . : . : . : . : . :
rJMSF040I14+ AATAGGCAACTAGGAGAAATTGTTGTATGTGTTGTTCAATACTTCAATGTACTGCACTTC
                      ____________________________________________________________
consensus AATAGGCAACTAGGAGAAATTGTTGTATGTGTTGTTCAATACTTCAATGTACTGCACTTC
 
. : . : . : . : . : . :
rJMSF040I14+ AGGATATATTATAAGTTTAAACATCCAAAAGGATGCTTTAACTTCAGCTGAAATTCAAGT
                      ____________________________________________________________
consensus AGGATATATTATAAGTTTAAACATCCAAAAGGATGCTTTAACTTCAGCTGAAATTCAAGT