| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF002L14 | Sequence | 386 | 005314 (6) | 712 | 012714 (5) | ref|XP_009767474.1| | 5e-79 | PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-l | |||
| JMSF026J18 | Sequence | 695 | 005314 (6) | gb|EYU33164.1| | 7e-24 | hypothetical protein MIMGU_mgv1a004218mg [Erythranthe guttata] | 706 | 012714 (5) | ref|XP_009611860.1| | 2e-27 | PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-l |
| JMSF040C08 | Sequence | 679 | 005314 (6) | gb|EYU33164.1| | 2e-23 | hypothetical protein MIMGU_mgv1a004218mg [Erythranthe guttata] | 784 | 012714 (5) | ref|XP_009611860.1| | 1e-43 | PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-l |
| JMSF051I18 | Sequence | 678 | 005314 (6) | ref|XP_009767474.1| | 4e-14 | PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-l | 702 | 012714 (5) | ref|XP_004236780.1| | 1e-36 | PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta [ |
| JMSF051M11 | Sequence | 688 | 005314 (6) | gb|EYU33164.1| | 2e-18 | hypothetical protein MIMGU_mgv1a004218mg [Erythranthe guttata] | 731 | 012714 (5) | ref|XP_009611860.1| | 2e-42 | PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-l |
This contig is upended
. : . : . : . : . : . :
rJMSF002L14+ CAGGAATGAAATGCAGTTC
____________________________________________________________
consensus CAGGAATGAAATGCAGTTC
. : . : . : . : . : . :
rJMSF002L14+ TTTTATGAGGAGCAGCTGCATAGAATGGAATGCATGGCCCAAGAGCCAGTGCTTTTTGAG
____________________________________________________________
consensus TTTTATGAGGAGCAGCTGCATAGAATGGAATGCATGGCCCAAGAGCCAGTGCTTTTTGAG
. : . : . : . : . : . :
rJMSF002L14+ GATATTTTGTGCCAGATTGTCGACATGATTAGTCCGGAGGAAGAAAGCTATGTTACATTA
rJMSF040C08+ TTA
____________________________________________________________
consensus GATATTTTGTGCCAGATTGTCGACATGATTAGTCCGGAGGAAGAAAGCTATGTTACATTA
. : . : . : . : . : . :
rJMSF002L14+ CGTGACTTGAAGGGCAGCAAACTATCAGGCAGTGTTTTCAACATACTTTTTAACCNCAAT
rJMSF051M11+ TGAAGGGCAGCCAACTATCAGGCAGTGTTTTCAACATACTTTTTAACCTCAAT
rJMSF051I18+ TTCAACATACTTTTTAACCTCAAT
rJMSF026J18+ TTTCAACATACTTTTTAACCTCAAT
rJMSF040C08+ CGTGACNTGAAGGGCAGCAAACTATCAGGCAGTGTTTTCAACATACTTTTTAACCTCAAT
____________________________________________________________
consensus CGTGACTTGAAGGGCAGCAAACTATCAGGCAGTGTTTTCAACATACTTTTTAACCTCAAT
. : . : . : . : . : . :
rJMSF002L14+ AAATTTATGGCATTTGAAACTCGTGATCCTTTCCTAATTCGTCAGGAGCGCGAGAATCCA
rJMSF051M11+ AAATTTATGGCATTTGAAACTCGTGATCCNTTCCTAATTCGTCAGGAGCGCGAGAATCCA
rJMSF051I18+ AAATTTATGGCATTTGAAACTCGTGATCCTTTCCTAATTCGTCAGGAGCGCGAGAATCCA
rJMSF026J18+ AAATTTATGGCA-TTGAAACTCGTGATCCTTTCCTAATTCGTCAGGAGCGCGAGAATCCA
rJMSF040C08+ AAATTTATGGCATTTGAAACTCGTGATCCTTTCCTAATTCGTCAGGAGCGCGAGAATCCA
____________________________________________________________
consensus AAATTTATGGCATTTGAAACTCGTGATCCTTTCCTAATTCGTCAGGAGCGCGAGAATCCA
. : . : . : . : . : . :
rJMSF002L14+ AATTTGACCGAGTGGGATCGCTTTGCACATAGAGAATATATTAGGCTTTCAATGGAGGAA
rJMSF051M11+ AATTTGACCGAGTGGGATCGCTTTGCACATAGAGAATATATTAGGCTTTCAATGGAGGAA
rJMSF051I18+ AATTTGACCGAGTGGGATCGCTTTGCACATAGAGAATATATTAGGCTTTCAATGGAGGAA
rJMSF026J18+ AATTTGACCGAGTGGGATCGCTTTGCACATAGAGAATATATTAGGCTTTCAATGGAGGAA
rJMSF040C08+ AATTTGACCGAGTGGGATCGCTTTGCACATAGAGAATATATTAGGCTTTCAATGGAGGAA
____________________________________________________________
consensus AATTTGACCGAGTGGGATCGCTTTGCACATAGAGAATATATTAGGCTTTCAATGGAGGAA
. : . : . : . : . : . :
rJMSF002L14+ GATGCTGAAGATGCCTCCAATGGAAGTGCTGATGTGTGGGATGAATCNCTCGAGGCTCCC
rJMSF051M11+ GATGCTGAAGATGCCTCCAATGGAAGTGCTGATGTGTGGGATGAATCACTCGAGGCTCCC
rJMSF051I18+ GATGCTGAAGATGCCTCCAATGGAAGTGCTGATGTGTGGGATGAATCNCTCGAGGCTCCC
rJMSF026J18+ GATGCTGAAGATGCCTCCAATGGAAGTGCTGATGTGTGGGATGAATCACTCGAGGCTCCC
rJMSF040C08+ GATGCTGAAGATGCCTCCAANGGAAGTGCTGATGTGTGGGATGAATCACTCGAGGCTCCC
____________________________________________________________
consensus GATGCTGAAGATGCCTCCAATGGAAGTGCTGATGTGTGGGATGAATCACTCGAGGCTCCC
. : . : . : . : . : . :
rJMSF002L14+ TTTTGAGTATTAGTTGTGAGTTATGCAAAATATATGAAAGGTGATTGTAGGGAATTTTAT
rJMSF051M11+ TTTTGAGTATTAGTTGTGAGTTATGCAAAATATATGAAAGGTGATTGTAGGGAATTTTAT
rJMSF051I18+ TTTTGAGTATTAGTTGTGAGTTATGCAAAATATATGAAAGGTGATTGTAGGGAATTTTAT
rJMSF026J18+ TTTTGAGTATTAGTTGTGAGTTATGCAAAATATATGAAAGGTGATTGTAGGGAATTTTAT
rJMSF040C08+ TTTTGAGTATTAGTTGTGAGCTATGCAAAATATATGAAAGGTGATTGTAGGGAATTTTAT
____________________________________________________________
consensus TTTTGAGTATTAGTTGTGAGTTATGCAAAATATATGAAAGGTGATTGTAGGGAATTTTAT
. : . : . : . : . : . :
rJMSF002L14+ TTGGCCTGGCTTTTGGACAGTGAAGGACAATTTTGCACAGCAAACTCGTGGGATTAGCGG
rJMSF051M11+ TTGGCCNGGCTTTTGGACAGTGAAGGACAATTTTGCACAGCAAACTCGTGGGATTAGCGG
rJMSF051I18+ TTGGCCTGGCTTTTGGACAGTGAAGGACAATTTTGCACAGCAAACTCGTGGGATTAGCGG
rJMSF026J18+ TTGGCCTGGCTTTTGGACAGTGAAGGACAATTTTGCNCAGCAAACTCGTGGGATTAGCGG
rJMSF040C08+ TTGGCCTGGCTTTTGGACAGTGAAGGACAATTTTGCACAGCAAACTCGTGGGATTAGCGG
____________________________________________________________
consensus TTGGCCTGGCTTTTGGACAGTGAAGGACAATTTTGCACAGCAAACTCGTGGGATTAGCGG
. : . : . : . : . : . :
rJMSF002L14+ ATGTGTCTTATTCCNCCAAAGGTGTTTTTTTTTTATTGCTAGAGGGATTTCGATTGTATC
rJMSF051M11+ ATGTGTCTTATTCCNCCAAAGGNGTTTTTTTTTTATTGCTAGAGGGATTTCGATTGTATC
rJMSF051I18+ ATGTGTCTTATTCCNCCAAAGGTGTTTTTTTTTTATTGCTAGAGGGATTTCGATTGTATC
rJMSF026J18+ ATGTGTCTTATTCCNCCAAAGGTGTTTTTTTTTTATTGCTAGAGGGATTTCGATTGTATC
rJMSF040C08+ ATGTGTCTTATTCCNCCAAAGGTGTTTTTTTTTTATTGCTAGAGGGATTTCGATTGTATC
____________________________________________________________
consensus ATGTGTCTTATTCCNCCAAAGGTGTTTTTTTTTTATTGCTAGAGGGATTTCGATTGTATC
. : . : . : . : . : . :
rJMSF002L14+ TGCACAAAGCTTGGTTTCCAAGTCGAATACCCATTCTAGTGTACAAGCTTCTTCTGACTT
rJMSF051M11+ TGCACAAAGCTTGGTTTCCAAGTCGAATACCCATTCTAGTGTACAAGCTTCTTCTGACTT
rJMSF051I18+ TGCACAAAGCTTGGTTTCCAAGTCGAATACCCATTCTAGTGTACAAGCTTCTTCTGACTT
rJMSF026J18+ TGCACAAAGCTTGGTTTCCAAGTCGAATACCCATTCTAGTGTACAAGCTTCTTCTGACTT
rJMSF040C08+ TGCACAAAGCTTGGTTTCCAAGTCGAATACCCATTCTAGTGTACAAGCTTCTTCTGACTT
____________________________________________________________
consensus TGCACAAAGCTTGGTTTCCAAGTCGAATACCCATTCTAGTGTACAAGCTTCTTCTGACTT
. : . : . : . : . : . :
rJMSF002L14+ CGATGTCCAAGTGTTTTGGCAACTCCACCAATTGGCAATTGGCGATTTTGCTGAAACTGG
rJMSF051M11+ CGATGTCCAAGTGTTTTGGCAACTCCACCAATTGGCAATTGGCGATTTTGCTGAAACTGG
rJMSF051I18+ CGATGTCCAAGTGTTTTGGCAACTCCACCAATTGGCAATTGGCGATTTTGCTGAAACTGG
rJMSF026J18+ CGATGTCCAAGTGTTTTGGCAACTCCACCAATTGGCAATTGGCGATTTTGCTGAAACTGG
rJMSF040C08+ CGATGTCCAAGTGTTTTGGCAACTCCACCAATTGGCAATTGGCGATTTTGCTGAAACTGG
____________________________________________________________
consensus CGATGTCCAAGTGTTTTGGCAACTCCACCAATTGGCAATTGGCGATTTTGCTGAAACTGG
. : . : . : . : . : . :
rJMSF002L14+ TTCTGATAATTCACAACTTCTAGCACTTCTTTC
rJMSF051M11+ TTCTGATAATTCACAACTTCTAGCACTTCTTTCTGTAGTTGTAAGGAACTGTGATTATTA
rJMSF051I18+ TTCTGATAATTCACAACTTCTAGCACTTCTTTCTGTAGTTGTAAGGAACTGTGATTATTA
rJMSF026J18+ TTCTGATAATTCACAACTTCTAGCACTTCTTTCTGTAGTTGTAAGGAACTGTGATTATTA
rJMSF040C08+ TTCTGATAATTCACAACTTCTAGCACTTCTTTCTGTAGTTGTAAGGAACTGTGATTATTA
____________________________________________________________
consensus TTCTGATAATTCACAACTTCTAGCACTTCTTTCTGTAGTTGTAAGGAACTGTGATTATTA
. : . : . : . : . : . :
rJMSF051M11+ ATTATTTGTTTCTAGAGAAAATGTTAGTGTTGTTTTTTCTATATACGCTTTTTCTCCGAG
rJMSF051I18+ ATTATTTGTTTCTAGAGAAAATGTTAGTGTTGTTTTTTCTATATACGCTTTTTCTCCGAG
rJMSF026J18+ ATTATTTGTTTCTAGAGAAAATGTTAGTGTTGTTTTTTCTATATACGCTTTTTCTCCGAG
rJMSF040C08+ ATTATTTGTTTCTAGAGAAAATGTTAGTGTTGTTTTTTCTATATACGCTTTTTCTCCGAG
____________________________________________________________
consensus ATTATTTGTTTCTAGAGAAAATGTTAGTGTTGTTTTTTCTATATACGCTTTTTCTCCGAG
. : . : . : . : . : . :
rJMSF051M11+ GGGGGTTCAGGTTCAGCATGGTGACTGGTGAGTGCCATGATGTAGTGTCGTCTTCTTTTC
rJMSF051I18+ GGGGGTTCAGGTTCAGCATGGTGACTGGTGAGTGCCATGATGTAGTGTCGTCTTCTTTTC
rJMSF026J18+ GGGGGTTCAGGTTCAGCATGGTGACTGGTGAGTGCCATGATGTAGTGNCGTCTTCTTTTC
rJMSF040C08+ GGGGGTTCAGGTTCAGCATGGTGACTGGTGAGTGCCATGATGTAGTGTCGTCTTCTTTTC
____________________________________________________________
consensus GGGGGTTCAGGTTCAGCATGGTGACTGGTGAGTGCCATGATGTAGTGTCGTCTTCTTTTC
. : . : . : . : . : . :
rJMSF051M11+ CCCCCTTTCCCAATTCGT
rJMSF051I18+ CCCCCTTTCCCAATTCGT
rJMSF026J18+ CCCCCTTTCCCAATTCGT
rJMSF040C08+ CCCCCTTTCCCAATTCGTTGTCTTCAACATTTGTGATGGACCTTTGTAATGATATCTTTT
____________________________________________________________
consensus CCCCCTTTCCCAATTCGTTGTCTTCAACATTTGTGATGGACCTTTGTAATGATATCTTTT