Contig 012713:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN035D14Sequence526012713 (2)ref|XP_006341553.1|2e-45PREDICTED: eukaryotic peptide chain release factor GTP-binding subunit ERF3A-li
JMSF040A07Sequence833012713 (2)ref|XP_010537486.1|1e-72PREDICTED: eukaryotic peptide chain release factor GTP-binding subunit ERF3A-li

Alignment

This contig is upended


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JMFN035D14-                                                             CATGGCCTGG
                      ____________________________________________________________
consensus                                                               CATGGCCTGG
 
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JMFN035D14-           GGAAAACTTGCGAGTCTGATTATACGGGGTTGAGGAATACGATATCTTGTCAGGATTTGT
rJMSF040A07+                    CGAGTCAGATTATCCNGGGTTGAGGAAGAGGATATCTCATCGGGTTTTGT
                      ____________________________________________________________
consensus             GGAAAACTTGCGAGTCTGATTATCCGGGGTTGAGGAATAGGATATCTTGTCGGGTTTTGT
 
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JMFN035D14-           TTTGTGCAGTGTTGCTAAACCGGAACCTGCTGTTACTGACTCTGATGCTCACTTGTCAAT
rJMSF040A07+          TTTGTGCAGTGTTGTAAAGCCAGTACCTGCTGTTACTGAGTTTGTTGCTCAGTTGTCAAT
                      ____________________________________________________________
consensus             TTTGTGCAGTGTTGTTAAGCCGGTACCTGCTGTTACTGAGTTTGTTGCTCAGTTGTCAAT
 
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JMFN035D14-           CCTGGAGTTGCTGGATCATGCAATTTTTACTGATGGATACCAGGCTGTGTTGCACCTTCA
rJMSF040A07+          CCTGGAGTTGCTGGATAATGCGATTTTTACTGCTGGATACAAGGCTGTGTTGCACATTCA
                      ____________________________________________________________
consensus             CCTGGAGTTGCTGGATCATGCGATTTTTACTGCTGGATACCAGGCTGTGTTGCACCTTCA
 
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JMFN035D14-           CTCACTAGTTGAAGAATGCCAAATTGTACAGTTGATGCACCAAATTGATCCTAAAACTAC
rJMSF040A07+          CTCAGTTGTTGAGGAATGTGAAATTGTAGAGTTGATGCAGCAAATTGATCCGAAAACAAG
                      ____________________________________________________________
consensus             CTCAGTTGTTGAGGAATGTGAAATTGTAGAGTTGATGCAGCAAATTGATCCTAAAACTAG
 
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JMFN035D14-           GAAACCGATGAGAAA-TAACCACTCTTTCTAAAGAATGGTGCTTTTGTTGTGTGACGCGT
rJMSF040A07+          GAAACCAATGAAAAAGAAACCACTCNTTGTAAAGAATGGTGCTTTTGTTGTGTGCCGCGT
                      ____________________________________________________________
consensus             GAAACCGATGAGAAAGTAACCACTCTTTGTAAAGAATGGTGCTTTTGTTGTGTGCCGCGT
 
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JMFN035D14-           TCAGGAAAACAGACTGATATGCATTGAGAAATTTTCTGATTTTGCCCACCTTGGAAGATT
rJMSF040A07+          TCAGGTAAACAGTATGATATGCATTGAGAAATTTTCTGATTTTGCCCAGCTTGGAAGATT
                      ____________________________________________________________
consensus             TCAGGTAAACAGTCTGATATGCATTGAGAAATTTTCTGATTTTGCCCAGCTTGGAAGATT
 
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JMFN035D14-           CACTCTTCGCACAGATGGGAAAACTGTTGCTGTG                          
rJMSF040A07+          CACTCTCCGCACAGAGGGGAAAACTGTTGCTGTGGGTAAAGTAACTTCTCTTCCTACCGC
                      ____________________________________________________________
consensus             CACTCTTCGCACAGATGGGAAAACTGTTGCTGTGGGTAAAGTAACTTCTCTTCCTACCGC
 
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rJMSF040A07+          ATAAAATTTTCTGTAATCTCTCAGGTATGGCTTATTGCAGTACAGACTTTTGTTTGGAGG
                      ____________________________________________________________
consensus             ATAAAATTTTCTGTAATCTCTCAGGTATGGCTTATTGCAGTACAGACTTTTGTTTGGAGG
 
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rJMSF040A07+          ATTACATTTTCTGATTGCTCTTGAAATTACCGAAAGAAAAAGCACAGCAAGTTNTAAGGC
                      ____________________________________________________________
consensus             ATTACATTTTCTGATTGCTCTTGAAATTACCGAAAGAAAAAGCACAGCAAGTTNTAAGGC
 
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rJMSF040A07+          GCAGTATAAATAGAAATATTTTGCTGTACTCCATCTCGTAGGTTATATACANTNTGCACC
                      ____________________________________________________________
consensus             GCAGTATAAATAGAAATATTTTGCTGTACTCCATCTCGTAGGTTATATACANTNTGCACC
 
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rJMSF040A07+          GTCTGATCTCGAGCTGGAGCTTTCACGGAATGACGCAATGGATATTACACTGATGGTGCA
                      ____________________________________________________________
consensus             GTCTGATCTCGAGCTGGAGCTTTCACGGAATGACGCAATGGATATTACACTGATGGTGCA
 
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rJMSF040A07+          GTATAGGGTGTTGTTGTTACTAGGCTGTCAATGTTAGCCTACCAAATTACCAATCATCAG
                      ____________________________________________________________
consensus             GTATAGGGTGTTGTTGTTACTAGGCTGTCAATGTTAGCCTACCAAATTACCAATCATCAG
 
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rJMSF040A07+          ATTTNGACTCTACTTATTTAAAGGGTTGTTATTGATATTTTGGATATTTATTGTNTTCAT
                      ____________________________________________________________
consensus             ATTTNGACTCTACTTATTTAAAGGGTTGTTATTGATATTTTGGATATTTATTGTNTTCAT
 
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rJMSF040A07+          AATCTTATTATTTATGATCGAGTTGGTACGCTTTTTTGTTTAAACATTCGATTGTGCTGT
                      ____________________________________________________________
consensus             AATCTTATTATTTATGATCGAGTTGGTACGCTTTTTTGTTTAAACATTCGATTGTGCTGT