Contig 012708:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF039E21Sequence729012708 (2)ref|XP_002280579.1|1e-134PREDICTED: uncharacterized membrane protein C776.05 [Vitis vinifera]780012708 (2)ref|XP_011078054.1|5e-90PREDICTED: uncharacterized membrane protein C776.05 isoform X3 [Sesamum indicum

Alignment

This contig is upended


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JMSF039E21-                           GACCGCCACCGTTGTAAAAATGTCGAGCTGCGAAGACCTCATCG
                      ____________________________________________________________
consensus                             GACCGCCACCGTTGTAAAAATGTCGAGCTGCGAAGACCTCATCG
 
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JMSF039E21-           AGTATACTAATGGAGATTCGTTCGACAAAGTCAGACAGAGGCTCAAAAATCGATCAAAGA
                      ____________________________________________________________
consensus             AGTATACTAATGGAGATTCGTTCGACAAAGTCAGACAGAGGCTCAAAAATCGATCAAAGA
 
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JMSF039E21-           AAATGGCCGAAACCAAGGAGAAGACGAAGCAGATCTTGTCGGAGTATGCAGATAAGATTG
                      ____________________________________________________________
consensus             AAATGGCCGAAACCAAGGAGAAGACGAAGCAGATCTTGTCGGAGTATGCAGATAAGATTG
 
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JMSF039E21-           CCAAACGGGCTGAAGTACATGAAACCTTCCTCACCAAGGTGACTCATCTGCTTGGTGTTC
                      ____________________________________________________________
consensus             CCAAACGGGCTGAAGTACATGAAACCTTCCTCACCAAGGTGACTCATCTGCTTGGTGTTC
 
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JMSF039E21-           TTTGGTTTGGGGGATTTTGCTTTCTTTTAGGTGCAAGGCCACAAGATATTCCTTACGTAT
                      ____________________________________________________________
consensus             TTTGGTTTGGGGGATTTTGCTTTCTTTTAGGTGCAAGGCCACAAGATATTCCTTACGTAT
 
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JMSF039E21-           ACTGTCTGTTCTACTTCACCTTTGTTCCTCTTCGATGGATTTACTACCGATATAAGAAAT
                      ____________________________________________________________
consensus             ACTGTCTGTTCTACTTCACCTTTGTTCCTCTTCGATGGATTTACTACCGATATAAGAAAT
 
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JMSF039E21-           GGCATTACTATCTTTTGGATTTTTGCTATTATGCTAATACGATTTCCATAATCACGATTC
                      ____________________________________________________________
consensus             GGCATTACTATCTTTTGGATTTTTGCTATTATGCTAATACGATTTCCATAATCACGATTC
 
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JMSF039E21-           TCTTCTATCCGAAAAATGAAAAGCTTTTCATGGTTTGTTTCTCATTTGCAGAGGGTCCTC
                      ____________________________________________________________
consensus             TCTTCTATCCGAAAAATGAAAAGCTTTTCATGGTTTGTTTCTCATTTGCAGAGGGTCCTC
 
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JMSF039E21-           TAGCATGGGCATTAATTGTTTGGCGTTGTAGCTTGGTTTTTAGTTCTGCTGACAAAATTG
                      ____________________________________________________________
consensus             TAGCATGGGCATTAATTGTTTGGCGTTGTAGCTTGGTTTTTAGTTCTGCTGACAAAATTG
 
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JMSF039E21-           TTAGTGTCTTCATACATCTTTTACCTGGGTTGGTTTTCTTCACAATTCGATGGTGGATTC
                      ____________________________________________________________
consensus             TTAGTGTCTTCATACATCTTTTACCTGGGTTGGTTTTCTTCACAATTCGATGGTGGATTC
 
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JMSF039E21-           CTGAGTATTTCGGAGCCATGCATCCCGAAGGAAATGAACGTAGAGCTTCGTGGCCTTACG
rJMSF039E21+                                 CCCGAAGGAAATGAACGTAGAGCTTCGTGGCCTTACG
                      ____________________________________________________________
consensus             CTGAGTATTTCGGAGCCATGCATCCCGAAGGAAATGAACGTAGAGCTTCGTGGCCTTACG
 
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JMSF039E21-           CAGAAAGCAAATCATACCTCTGGACATGGCTGTTTTTCGTCCCCTTAATATCATACACTC
rJMSF039E21+          CAGAAAGCAAATCATACCTCTGGACATGGCTGTTTTTCGTCCCCTTAATATCATACACTC
                      ____________________________________________________________
consensus             CAGAAAGCAAATCATACCTCTGGACATGGCTGTTTTTCGTCCCCTTAATATCATACACTC
 
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JMSF039E21-           TCTGGCAGATTCTCTATTTCCTCAT                                   
rJMSF039E21+          TCTGGCAGATTCTCTATTTCCTCATCGTGGATGTGTTACGCCGCCAAAGATTCTTAAGAG
                      ____________________________________________________________
consensus             TCTGGCAGATTCTCTATTTCCTCATCGTGGATGTGTTACGCCGCCAAAGATTCTTAAGAG
 
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rJMSF039E21+          ATCCCGAGGTCATGACTTCTTATAGGGAACTATCGAAAAAAGCCCAGAAAGCAAACAACG
                      ____________________________________________________________
consensus             ATCCCGAGGTCATGACTTCTTATAGGGAACTATCGAAAAAAGCCCAGAAAGCAAACAACG
 
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rJMSF039E21+          TATGGTGGCGTCTAAGCGGGTTGCTCGGTGACCAAAACCGCTTGTTCATGTACATTCTTC
                      ____________________________________________________________
consensus             TATGGTGGCGTCTAAGCGGGTTGCTCGGTGACCAAAACCGCTTGTTCATGTACATTCTTC
 
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rJMSF039E21+          TGCAGGCTCTATTCACCATGGCAACCACAGCACTTGCAGTGCCCATCTTTCTGTCTTACG
                      ____________________________________________________________
consensus             TGCAGGCTCTATTCACCATGGCAACCACAGCACTTGCAGTGCCCATCTTTCTGTCTTACG
 
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rJMSF039E21+          AGCTCCACGTTGTATTCCAAATACTCAAGATCTCTGCAGCAACGTGGAACGGGGGGAACT
                      ____________________________________________________________
consensus             AGCTCCACGTTGTATTCCAAATACTCAAGATCTCTGCAGCAACGTGGAACGGGGGGAACT
 
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rJMSF039E21+          TCTTGGTGGAAGTGATGCCAAGACAGGCGATCCTCAAGGAGAAGAAGAAATCGGAGATGC
                      ____________________________________________________________
consensus             TCTTGGTGGAAGTGATGCCAAGACAGGCGATCCTCAAGGAGAAGAAGAAATCGGAGATGC
 
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rJMSF039E21+          AACTCACGCCAACATCATCGGAATATCAGACTGCTACCCCGGATAGCGCTATCTCCCCGG
                      ____________________________________________________________
consensus             AACTCACGCCAACATCATCGGAATATCAGACTGCTACCCCGGATAGCGCTATCTCCCCGG
 
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rJMSF039E21+          ATAGCTCTATCTCCCCAGATAGCGCGAGAAAAGTAAGCTTCGAGTCTGAGACTGTTTTTA
                      ____________________________________________________________
consensus             ATAGCTCTATCTCCCCAGATAGCGCGAGAAAAGTAAGCTTCGAGTCTGAGACTGTTTTTA
 
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rJMSF039E21+          CGGAGTAGATGGCGTGAGATTCTTGAGGAAACAGTCACCCCCCCCCTGTTGTGATATCTG
                      ____________________________________________________________
consensus             CGGAGTAGATGGCGTGAGATTCTTGAGGAAACAGTCACCCCCCCCCTGTTGTGATATCTG
 
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rJMSF039E21+          CAGGCTTATAACTTACTGTAGTTTTTACACTTTCAATTCTGCCTACAAATGAATGGAATT
                      ____________________________________________________________
consensus             CAGGCTTATAACTTACTGTAGTTTTTACACTTTCAATTCTGCCTACAAATGAATGGAATT
 
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rJMSF039E21+          TCTACTTTTGTTGAGTTCAAAAGATACAAGAAATTATTGGCAGAAGTGTAGAAAATGAGT
                      ____________________________________________________________
consensus             TCTACTTTTGTTGAGTTCAAAAGATACAAGAAATTATTGGCAGAAGTGTAGAAAATGAGT