Contig 012707:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014N15Sequence484002162 (2)ref|XP_004242359.1|1e-08PREDICTED: myb-related protein Myb4-like [Solanum lycopersicum]217012707 (2)
JMSF039E12Sequence680002162 (2)ref|XP_011080037.1|1e-32PREDICTED: chromatin modification-related protein MEAF6-like [Sesamum indicum]692012707 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF039E12+ TNCTTTTTTTTTTTTTTTTAGTTCAAACTCTT
                      ____________________________________________________________
consensus TNCTTTTTTTTTTTTTTTTAGTTCAAACTCTT
 
. : . : . : . : . : . :
rJMSF014N15+ GTCGAGTTCGCTTANGAAGATA
rJMSF039E12+ GATCTTATANTTAAAGAACTCAAACTCTTATCACTTGAGTCGAGTTCGATTAAGAAGATA
                      ____________________________________________________________
consensus GATCTTATANTTAAAGAACTCAAACTCTTATCACTTGAGTCGAGTTCGCTTAAGAAGATA
 
. : . : . : . : . : . :
rJMSF014N15+ CAAGACCGNAGTTAGTTTNTAGNGACTGGCATTNTAAATCATGGCANTTTGAGAGNGATA
rJMSF039E12+ CAAGACCGAAGTTAGTTTATAGAGACTGGCATTTTAAATCATGGCACTNTGAGAGNGATA
                      ____________________________________________________________
consensus CAAGACCGAAGTTAGTTTATAGAGACTGGCATTTTAAATCATGGCACTTTGAGAGNGATA
 
. : . : . : . : . : . :
rJMSF014N15+ TTNGTACATCNTAGGGGAAAGAGTACCATTGTTGCAAGCAGGGTTGTATAAAGATCCTCA
rJMSF039E12+ TTTGTACATCATAGGGGAAAGAGTACCNTTGTTGCAAGCAGGGTTGTATAAAGATCCTCA
                      ____________________________________________________________
consensus TTTGTACATCATAGGGGAAAGAGTACCATTGTTGCAAGCAGGGTTGTATAAAGATCCTCA
 
. : . : . : . : . : . :
rJMSF014N15+ TTTTTTCTCCAAAAACCAACCAGCTTGCTATCTCAAAGNCAAGCCATAANTACATCNTGT
rJMSF039E12+ TTTTTTCTCCAAAAACCANCCAGCTTGCTATCTCAAAGCCAAGCCATANCTACATCATGT
                      ____________________________________________________________
consensus TTTTTTCTCCAAAAACCAACCAGCTTGCTATCTCAAAGCCAAGCCATAACTACATCATGT
 
. : . : . : . : . : . :
rJMSF014N15+ CANGGTCATCTTCAT
rJMSF039E12+ CAAGGTCATNTTCATAATCGTAGTNTGGTTCACTAGAATGACGCAGTCTCTTCGCCTCTC
                      ____________________________________________________________
consensus CAAGGTCATCTTCATAATCGTAGTNTGGTTCACTAGAATGACGCAGTCTCTTCGCCTCTC
 
. : . : . : . : . : . :
rJMSF039E12+ TCGGGCCTCCCCTACCTTTCTTCTGTTTCCCCCTGCAGACATTGTGAATTTTATCAAGTC
                      ____________________________________________________________
consensus TCGGGCCTCCCCTACCTTTCTTCTGTTTCCCCCTGCAGACATTGTGAATTTTATCAAGTC
 
. : . : . : . : . : . :
rJMSF039E12+ AGCTGTGACCAACAAAAATTTGTTCGGGATATAAAAATTCTCTATACAATAGTATCAAAT
                      ____________________________________________________________
consensus AGCTGTGACCAACAAAAATTTGTTCGGGATATAAAAATTCTCTATACAATAGTATCAAAT
 
. : . : . : . : . : . :
rJMSF039E12+ CCCTTCCATTAAAGGCACTGGTTACCAATAGGATAAGGGATAACCAAATACTTACTGTCC
                      ____________________________________________________________
consensus CCCTTCCATTAAAGGCACTGGTTACCAATAGGATAAGGGATAACCAAATACTTACTGTCC
 
. : . : . : . : . : . :
rJMSF039E12+ ATTTGCAGGTATACCTGCACCATCACGCCCAACCGNTACTTCNTCAGCCCGGAACAAGGG
                      ____________________________________________________________
consensus ATTTGCAGGTATACCTGCACCATCACGCCCAACCGNTACTTCNTCAGCCCGGAACAAGGG
 
. : . : . : . : . : . :
rJMSF039E12+ CAAATAAGAAACATAAGGAAATGAGCAAACCATACATTTATTATGGGCCTGACCACGCAT
                      ____________________________________________________________
consensus CAAATAAGAAACATAAGGAAATGAGCAAACCATACATTTATTATGGGCCTGACCACGCAT
 
. : . : . : . : . : . :
rJMSF039E12+ GTGGCAGCTAAACGTAGTNGTNTCTTACAATCTTGGTTNGGCNTACNGTNGATTGGAGAT
                      ____________________________________________________________
consensus GTGGCAGCTAAACGTAGTNGTNTCTTACAATCTTGGTTNGGCNTACNGTNGATTGGAGAT