Contig 012703:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF039M03+                                ATCTTCAGACTTGAGGCCGGAACTTATTTCGGGGATCC
                      ____________________________________________________________
consensus                                   ATCTTCAGACTTGAGGCCGGAACTTATTTCGGGGATCC
 
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rJMSF039M03+          GGGAGCGAGGCATTCTCTACCCAGACGTCTTCCATGAGCACTTCAAGTGGTGCGGTTGGT
                      ____________________________________________________________
consensus             GGGAGCGAGGCATTCTCTACCCAGACGTCTTCCATGAGCACTTCAAGTGGTGCGGTTGGT
 
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rJMSF039M03+          TCGATATTTTCGAACACTGGTCCTGCTTCCCACTCGGGCGTTCAACCGTCCGGGCAGAGT
rJMSF048J01+                                                           CCGGGCAGAGT
rJMSF039A14+                                  GCTTCCCACTCGGGCGTTCAACCGTCCGGGCAGAGT
                      ____________________________________________________________
consensus             TCGATATTTTCGAACACTGGTCCTGCTTCCCACTCGGGCGTTCAACCGTCCGGGCAGAGT
 
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rJMSF039M03+          TCGAGTGGAAGTGGTAGCACAGGCCACGGAGGTGAGGTTCACTCATCGAGCTAAAACGAT
rJMSF048J01+          TCGAGTGGAAGTGGTAGCACAGGCCACGGAGGTGAGGTTCACTCATCGAGCTAAAACGAT
rJMSF039A14+          TCGAGTGGAAGTGGTAGCACAGGCCACGGAGGTGAGGTTCACTCATCGAGCTAAAACGAT
                      ____________________________________________________________
consensus             TCGAGTGGAAGTGGTAGCACAGGCCACGGAGGTGAGGTTCACTCATCGAGCTAAAACGAT
 
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rJMSF039M03+          TGAGTGATTTTCGTTTTTTCGTTGCTCAATGACCATGAAGTAGCGTTAAATTTTTGGTGC
rJMSF048J01+          TGAGTGATTTTCGTTTTTTCGTTGCTCAATGACCATGAAGTAGCGTTAAATTTTTGGTGC
rJMSF039A14+          TGAGTGATTTTCGTTTTTTCGTTGCTCAATGACCATGAAGTAGCGTTAAATTTTTGGTGC
                      ____________________________________________________________
consensus             TGAGTGATTTTCGTTTTTTCGTTGCTCAATGACCATGAAGTAGCGTTAAATTTTTGGTGC
 
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rJMSF039M03+          TAGTCAATCATTTCTAGGAAGCTTCTTCTCTTGGTCATCATAGTTCACACGTAGTAGCTC
rJMSF048J01+          TAGTCAATCATTTCTAGGAAGCTTCTTCTCTTGGTCATCATAGTTCACACGTAGTAGCTC
rJMSF039A14+          TAGTCAATCATTTCTAGGAAGCTTCTTCTCTTGGTCATCATAGTTCACACGTAGTAGCTC
                      ____________________________________________________________
consensus             TAGTCAATCATTTCTAGGAAGCTTCTTCTCTTGGTCATCATAGTTCACACGTAGTAGCTC
 
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rJMSF039M03+          TGTTCTTCATCTGTGTGTTCATAAAATCATTATATCTGGCAAATTTTCCGTATCGAATAA
rJMSF048J01+          TGTTCTTCATCTGTGTGTTCATAAAATCATTATATCTGGCAAATTTTCCATATCGAATAA
rJMSF039A14+          TGTTCTTCATCTGTGTGTTCATAAAATCATTATATCTGGCAAATTTTCCATATCGAATAA
                      ____________________________________________________________
consensus             TGTTCTTCATCTGTGTGTTCATAAAATCATTATATCTGGCAAATTTTCCATATCGAATAA
 
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rJMSF039M03+          GTGGAAGTTCTAGAAGATCCATCCATCAACCCGCAATATAGTCCTCCCTCTCTGTAGCTA
rJMSF048J01+          GTGGAAGTTCTAGAAGATCCATCCATCAACCCGCAATATAGTCCTCCCTCTCTGTAGCTA
rJMSF039A14+          GTGGAAGTTCTAGAAGATCCATCCATCAACCCGCAATATAGTCCTCCCTCTCTGTAGCTA
                      ____________________________________________________________
consensus             GTGGAAGTTCTAGAAGATCCATCCATCAACCCGCAATATAGTCCTCCCTCTCTGTAGCTA
 
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rJMSF039M03+          GCTTTTGAATAACAACACCCGCCTTCCATTTAGGAGAATTTGCTTCCATTCCAAAATTTT
rJMSF048J01+          GCTTTTGAATAACAACACCCGCCTTCCATTTAGGAGAATTTGCTTCCATTCCAAAATTTT
rJMSF039A14+          GCTTTTGAATAACAACACCCGCCTTCCATTTAGGAGAATTTGCTTCCATTCCAAAATTTT
                      ____________________________________________________________
consensus             GCTTTTGAATAACAACACCCGCCTTCCATTTAGGAGAATTTGCTTCCATTCCAAAATTTT
 
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rJMSF039M03+          GGACCTTGTTGTGCCTTCCTGCCTATTTATGTTGTAGTCTTTGTTCGGAACAAGAAACAA
rJMSF048J01+          GGACCTTGTTGTGCCTTCCTGCCTATTTATGTTGTAGTCTTTGTTCGGAACAAGAAACAA
rJMSF039A14+          GGACCTTGTTGTGCCTTCCTGCCTATTTATGTTGTAGTCTTTGTTCGGAACAAGAAACAA
                      ____________________________________________________________
consensus             GGACCTTGTTGTGCCTTCCTGCCTATTTATGTTGTAGTCTTTGTTCGGAACAAGAAACAA
 
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rJMSF039M03+          ACGATTGTTCCTACACCATTGCCCTTTTGAAAATTGACTCTCTTCCCGTCTATCTAGTCC
rJMSF048J01+          ACGATTGTTCCTACACCATTGCCCTTTTGAAAATTGACTCTCTTCCCGTCTATCTAGTCC
rJMSF039A14+          ACGATTGTTCCTACACCATTGCCCTTTTGAAAATTGACTCTCTTCCCGTCTATCTAGTCC
                      ____________________________________________________________
consensus             ACGATTGTTCCTACACCATTGCCCTTTTGAAAATTGACTCTCTTCCCGTCTATCTAGTCC
 
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rJMSF039M03+          TTTTTGAAATCGGGACTCGGGAGCAAGCTTCCATCTTGACATTCTACTTAATTTTAAAGT
rJMSF048J01+          TTTTTGAAATCGGGACTCGGGAGCAAGCTTCCATCTTGACATTCTACTTAATTTTAAAGT
rJMSF039A14+          TTTTTGAAATCGGGACTCGGGAGCAAGCTTCCATCTTGACATTCTACTTAATTTTAAAGT
                      ____________________________________________________________
consensus             TTTTTGAAATCGGGACTCGGGAGCAAGCTTCCATCTTGACATTCTACTTAATTTTAAAGT
 
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rJMSF039M03+          CTCCTTGTTCGTTCCCCCTTTTTGGCTGGGGCATTGTTGTGGCAGATGAAAACTGCGAGG
rJMSF048J01+          CTCCTTGTTCGTTCCCCCTTTTTGGCTGGGGCATTGTTGTGGCAGATGAAAACTGCGAGG
rJMSF039A14+          CTCCTTGTTCGTTCCCCCTTTTTGGCTGGGGCATTGTTGTGGCAGATGAAAACTGCGAGG
                      ____________________________________________________________
consensus             CTCCTTGTTCGTTCCCCCTTTTTGGCTGGGGCATTGTTGTGGCAGATGAAAACTGCGAGG
 
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rJMSF039M03+          CAATTAAATGCCGCCGTTTATGGATAAGATCCATACTTATGTTGTGTATGTATGTGAATT
rJMSF048J01+          CAATTAAATGCCGCCGTTTATGGATAAGATCCATACTTATGTTGTGTATGTATGTGAATT
rJMSF039A14+          CAATTAAATGCCGCCGTTTATGGATAAGATCCATACTTATGTTGTGTATGTATGTGAATT
                      ____________________________________________________________
consensus             CAATTAAATGCCGCCGTTTATGGATAAGATCCATACTTATGTTGTGTATGTATGTGAATT
 
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rJMSF039M03+          TCTTTGGCAACTTGATAAATGT                                      
rJMSF048J01+          TCTTTGGCAACTTGATAAATGTTATCACGGTATACAACAGATT                 
rJMSF039A14+          TCTTTGGCAACTTGATAAATGTTATCACGGTATACAACAGATTTATCGAAAACCCTGAAC
                      ____________________________________________________________
consensus             TCTTTGGCAACTTGATAAATGTTATCACGGTATACAACAGATTTATCGAAAACCCTGAAC