Contig 012701:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF017E08Sequence307012701 (8)ref|XP_011092096.1|9e-38PREDICTED: bidirectional sugar transporter SWEET16-like [Sesamum indicum]753012701 (8)ref|XP_009630970.1|2e-84PREDICTED: bidirectional sugar transporter SWEET16-like [Nicotiana tomentosifor
JMSF018E08Sequence277012701 (8)ref|XP_009796370.1|1e-32PREDICTED: bidirectional sugar transporter SWEET16-like [Nicotiana sylvestris]749012701 (8)ref|XP_009630970.1|1e-52PREDICTED: bidirectional sugar transporter SWEET16-like [Nicotiana tomentosifor
JMSF037I06Sequence653012701 (8)ref|XP_009630970.1|3e-92PREDICTED: bidirectional sugar transporter SWEET16-like [Nicotiana tomentosifor699012701 (8)ref|XP_009796370.1|4e-78PREDICTED: bidirectional sugar transporter SWEET16-like [Nicotiana sylvestris]
JMSF038K24Sequence641012701 (8)ref|XP_009796370.1|2e-17PREDICTED: bidirectional sugar transporter SWEET16-like [Nicotiana sylvestris]854012701 (8)ref|XP_009630970.1|2e-95PREDICTED: bidirectional sugar transporter SWEET16-like [Nicotiana tomentosifor

Alignment

This contig is upended


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JMSF038K24-             GGGAGGTCCGGTCATGGCTAGCTTGAGCTTCATTGTTGGCATCATTGGGAATGTGATA
                      ____________________________________________________________
consensus               GGGAGGTCCGGTCATGGCTAGCTTGAGCTTCATTGTTGGCATCATTGGGAATGTGATA
 
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JMSF038K24-           TCTATACTCATGTTTCTTGCTCCGGTGTAAGTCTATAATTTTAATTTTTTTCTCTTTCTC
                      ____________________________________________________________
consensus             TCTATACTCATGTTTCTTGCTCCGGTGTAAGTCTATAATTTTAATTTTTTTCTCTTTCTC
 
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JMSF038K24-           AAGGTAACATGTACAACATTGATATGCCGCGCCAGTCATCCTTCCGACTAAAACATGTCG
                      ____________________________________________________________
consensus             AAGGTAACATGTACAACATTGATATGCCGCGCCAGTCATCCTTCCGACTAAAACATGTCG
 
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JMSF038K24-           GAATGTGTAATTTGTAAGCATATTTTTGTCCGTTGATATATTAATGGAATTGACATATTA
                      ____________________________________________________________
consensus             GAATGTGTAATTTGTAAGCATATTTTTGTCCGTTGATATATTAATGGAATTGACATATTA
 
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JMSF038K24-           TACATGAATGGATGAAAATACCCTTACAAATTACACTGTCCAACATGTTTTAGCCGGAGA
                      ____________________________________________________________
consensus             TACATGAATGGATGAAAATACCCTTACAAATTACACTGTCCAACATGTTTTAGCCGGAGA
 
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JMSF038K24-           GGTGACCGGCGTAATCAACTTTAGCACAAAAAAAATAGTCGCAAATAAAAATTGGTATTA
                      ____________________________________________________________
consensus             GGTGACCGGCGTAATCAACTTTAGCACAAAAAAAATAGTCGCAAATAAAAATTGGTATTA
 
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JMSF038K24-           ATTAAACATGTAGACTAAAACTGCCATTTTACTAATATTTGTGAACTAAAATTGATGTTT
                      ____________________________________________________________
consensus             ATTAAACATGTAGACTAAAACTGCCATTTTACTAATATTTGTGAACTAAAATTGATGTTT
 
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JMSF038K24-           GATCTTAATAATAATAATGAGTGTTTAGAAAAACGTTCAAGCGGATAGTGCAGAAGAAAT
JMSF017E08-                                       AAAAACGTTCAAGCGGATAGTGCAGAAGAAAT
JMSF018E08-                                       AAAAACGTTCAAGCGGATAGTGCAGAAGAAAT
JMSF037I06-                                       AAAAACGTTCAAGCGGATAGTGCAGAAGAAAT
rJMSF038K24+                                      AAAAACGTTCAAGCGGATAGTGCAGAAGAAAT
                      ____________________________________________________________
consensus             GATCTTAATAATAATAATGAGTGTTTAGAAAAACGTTCAAGCGGATAGTGCAGAAGAAAT
 
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JMSF038K24-           CAACGGAGAATTTCAAAGGGATTCCATACATAACAACACTATTGAGCACGAGTTTATGGT
JMSF017E08-           CAACGGAGAATTTCAAAGGGATTCCATACATAACAACACTATTGAGCACGAGTTTATGGT
JMSF018E08-           CAACGGAGAATTTCAAAGGGATTCCATACATAACAACACTATTGAGCACGAGTTTATGGT
JMSF037I06-           CAACGGAGAATTTCAAAGGGATTCCATACATAACAACACTATTGAGCACGAGTTTATGGT
rJMSF018E08+                            GGATTCCATACATAACAACACTATTGAGCACGAGTTTATNGT
rJMSF037I06+                                                      AGCACGAGTTTATGGT
rJMSF017E08+                           GGGATTCCATACATAACAACACTATTGAGCACGAGTTTATGGT
rJMSF038K24+          CAACGGAGAATTTCAAAGGGATTCCATACATAACAACACTATTGAGCACGAGTTTATGGT
                      ____________________________________________________________
consensus             CAACGGAGAATTTCAAAGGGATTCCATACATAACAACACTATTGAGCACGAGTTTATGGT
 
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JMSF038K24-           CGTTCTATGGGCTTCTCAAGCCTGGTGGTTTGCTTGTGGTGACAGTAAATGGCACCGGTG
JMSF017E08-           CGTTCTATGGGCTTCTCAAGCCTGGTGGTTTGCTTGTGGTGACAGTAAATGGCACCGGTG
JMSF018E08-           CGTTCTATGGGCTTCTCAAGCCTGGTGGTTTGCTTGTGGTGACAGTAAATGGCACCGGTG
JMSF037I06-           CGTTCTATGGGCTTCTCAAGCCTGGTGGTTTGCTTGTGGTGACAGTAAATGGCACCGGTG
rJMSF018E08+          CGTTCTATGGGCTTCTCAAGCCTGGTGGTTTGCTTGTGGTGACAGTAAATGGCACCGGTG
rJMSF037I06+          CGTTCTATGGGCTTCTCAAGCCTGGTGGTTTGCTTGTGGTGACAGTAAATGGCACCGGTG
rJMSF017E08+          CGTTCTATGGGCTTCTCAAGCCTGGTGGTTTGCTTGTGGTGACAGTAAATGGCACCGGTG
rJMSF038K24+          CGTTCTATGGGCTTCTCAAGCCTGGTGGTTTGCTTGTGGTGACAGTAAATGGCACCGGTG
                      ____________________________________________________________
consensus             CGTTCTATGGGCTTCTCAAGCCTGGTGGTTTGCTTGTGGTGACAGTAAATGGCACCGGTG
 
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JMSF038K24-           TTGTTTTGCACATCATCTACGTCTCTCTTTTTCTCATTTACGC                 
JMSF017E08-           TTGTTTTGCACATCATCTACGTCTCTCTTTTTCTCATTTACGCTCCTAAAAACATTAAGA
JMSF018E08-           TTGTTTTGCACATCATCTACGTCTCTCTTTTTCTCATTTAC                   
JMSF037I06-           TTGTTTTGCACATCATCTACGTCTCTCTTTTTCTCATTTACGCTCCTAAAAACATTAAGA
rJMSF018E08+          TTGTTTTGCACATCATCTACGTCTCTCTTTTTCTCATTTACGCTCCTAAAAACATTAAGA
rJMSF037I06+          TTGTTTTGCACATCATCTACGTCTCTCTTTTTCTCATTTACGCTCCTAAAAACATTAAGA
rJMSF017E08+          TTGTTTTGCACATCATCTACGTCTCTCTTTTTCTCATTTACGCTCCTAAAAACATTAAGA
rJMSF038K24+          TTGTTTTGCACATCATCTACGTCTCTCTTTTTCTCATTTACGCTCCTAAAAACATTAAGA
                      ____________________________________________________________
consensus             TTGTTTTGCACATCATCTACGTCTCTCTTTTTCTCATTTACGCTCCTAAAAACATTAAGA
 
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JMSF017E08-           TTCGATCTTTG                                                 
JMSF037I06-           TTCGATCTTTGAAAATGGTTGGCATCATTAACGTAGCTTTT-CTTGGGGCGGTGGTAGCA
rJMSF018E08+          TTCGATCTTTGAAAATGGTTGGCATCATTAACGTAGCTTTTACTTGGGGCGGTGGTAGCA
rJMSF037I06+          TTCGATCTTTGAAAATGGTTGGCATCATTAACGTAGCTTTT-CTTGGGGCGGTGGTAGCA
rJMSF017E08+          TTCGATCTTTGAAAATGGTTGGCATCATTAACGTAGCTTTT-CTTGGGGCGGTGGTAGCA
rJMSF038K24+          TTCGATCTTTGAAAATGGTTGGCATCATTAACGTAGCTTTT-CTTGGGGCGGTGGTAGCA
                      ____________________________________________________________
consensus             TTCGATCTTTGAAAATGGTTGGCATCATTAACGTAGCTTTT-CTTGGGGCGGTGGTAGCA
 
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JMSF037I06-           GTAACTCTTTCAGTGCTACATGGAAAAACAAAGCTTATGTCGGTGGGGCTTCTGTGCACT
rJMSF018E08+          GTAACTCTTTCAGTGCTACATGGAAAAACAAAGCTTATGTCGGTGGGGCTTCTGTGCACT
rJMSF037I06+          GTAACTCTTTCAGTGCTACATGGAAAAACAAAGCTTATGTCGGTGGGGCTTCTGTGCACT
rJMSF017E08+          GTAACTCTTTCAGTGCTACATGGAAAAACAAAGCTTATGTCGGTGGGGCTTCTGTGCACT
rJMSF038K24+          GTAACTCTTTCAGTGCTACATGGAAAAACAAAGCTTATGTCGGTGGGGCTTCTGTGCACT
                      ____________________________________________________________
consensus             GTAACTCTTTCAGTGCTACATGGAAAAACAAAGCTTATGTCGGTGGGGCTTCTGTGCACT
 
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JMSF037I06-           GGACTAACTATTGGCATGTATGCTTCTCCTCTTTCCGCAATGAGGACAGTGATAAAAATG
rJMSF018E08+          GGACTAACTATTGGCATGTATGCTTCTCCTCTTTCCGCAATGAGGACAGTGATAAAAATG
rJMSF037I06+          GGACTAACTATTGGCATGTATGCTTCTCCTCTTTCCGCAATGAGGACAGTGATAAAAATG
rJMSF017E08+          GGACTAACTATTGGCATGTATGCTTCTCCTCTTTCCGCAATGAGGACAGTGATAAAAATG
rJMSF038K24+          GGACTAACTATTGGCATGTATGCTTCTCCTCTTTCCGCAATGAGGACAGTGATAAAAATG
                      ____________________________________________________________
consensus             GGACTAACTATTGGCATGTATGCTTCTCCTCTTTCCGCAATGAGGACAGTGATAAAAATG
 
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JMSF037I06-           AAAAGTGTGGAGTATATGCCATTTTGGCTCTCATTTTTCCAAGTGTTGAATGGGGGCATT
rJMSF018E08+          AAAAGTGTGGAGTATATGCCATTTTGGCTCTCATTTTTCCAAGTGTTGAATGGGGGCATT
rJMSF037I06+          AAAAGTGTGGAGTATATGCCATTTTGGCTCTCATTTTTCCAAGTGTTGAATGGGGGCATT
rJMSF017E08+          AAAAGTGTGGAGTATATGCCATTTTGGCTCTCATTTTTCCAAGTGTTGAATGGGGGCATT
rJMSF038K24+          AAAAGTGTGGAGTATATGCCATTTTGGCTCTCATTTTTCCAAGTGTTGAATGGGGGCATT
                      ____________________________________________________________
consensus             AAAAGTGTGGAGTATATGCCATTTTGGCTCTCATTTTTCCAAGTGTTGAATGGGGGCATT
 
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JMSF037I06-           TGGGCTTCTTATGCTATGCTTGTAAGGGATCTATACATAGGAATACCCAATGGAATTGGA
rJMSF018E08+          TGGGCTTCTTATGCTATGCTTGTAAGGGATCTATACATAGGAATACCCAATGGAATTGGA
rJMSF037I06+          TGGGCTTCTTATGCTATGCTTGTAAGGGATCTATACATAGGAATACCCAATGGAATTGGA
rJMSF017E08+          TGGGCTTCTTATGCTATGCTTGTAAGGGATCTATACATAGGAATACCCAATGGAATTGGA
rJMSF038K24+          TGGGCTTCTTATGCTATGCTTGTAAGGGATCTATACATAGGAATACCCAATGGAATTGGA
                      ____________________________________________________________
consensus             TGGGCTTCTTATGCTATGCTTGTAAGGGATCTATACATAGGAATACCCAATGGAATTGGA
 
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JMSF037I06-           TTCCTACT                                                    
rJMSF018E08+          TTCCTACTGGGCTCAGCCCAAATTATCCTTTACTTCATATACTACCAGTCAACGCCAGCA
rJMSF037I06+          TTCCTACTGGGCTCAGCCCAAATTATCCTTTACTTCATATACTACCAGTCAACGCCAGCA
rJMSF017E08+          TTCCTACTGGGCTCAGCCCAAATTATCCTTTACTTCATATACTACCAGTCAACGCCAGCA
rJMSF038K24+          TTCCTACTGGGCTCAGCCCAAATTATCCTTTACTTCATATACTACCAGTCAACGCCAGCA
                      ____________________________________________________________
consensus             TTCCTACTGGGCTCAGCCCAAATTATCCTTTACTTCATATACTACCAGTCAACGCCAGCA
 
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rJMSF018E08+          AAGGAAGAAGAAGACCCGGCCCATCTGGTGAAAGGAGGGATTGAAATGGCAAACGACGTC
rJMSF037I06+          AAGGAAGAAGAAGACCCGGCCCATCTGGTGAAAGGAGGGATTGAAATGGCAAACGACGTC
rJMSF017E08+          AAGGAAGAAGAAGACCCGGCCCATCTGGTGAAAGGAGGGATTGAAATGGCAAACGACGTC
rJMSF038K24+          AAGGAAGAAGAAGACCCGGCCCATCTGGTGAAAGGAGGGATTGAAATGGCAAACGACGTC
                      ____________________________________________________________
consensus             AAGGAAGAAGAAGACCCGGCCCATCTGGTGAAAGGAGGGATTGAAATGGCAAACGACGTC
 
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rJMSF018E08+          GCTTTTAAAAGCAACGGAAAAGATCCATCGGAAGCCCGAGCGCATACCTAATTATCTCGT
rJMSF037I06+          GCTTTTAAAAGCAACGGAAAAGATCCATCGGAAGCCCGAGCGCATACCTAATTATCTCGT
rJMSF017E08+          GCTTTTAAAAGCAACGGAAAAGATCCATCGGAAGCCCGAGCGCATACCTAATTATCTCGT
rJMSF038K24+          GCTTTTAAAAGCAACGGAAAAGATCCATCGGAAGCCCGAGCGCATACCTAATTATCTCGT
                      ____________________________________________________________
consensus             GCTTTTAAAAGCAACGGAAAAGATCCATCGGAAGCCCGAGCGCATACCTAATTATCTCGT
 
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rJMSF018E08+          ACAAATCACCCTCGTAATACTTTGAGAAATGCAATATGCATAAAAATTTACATTATCTAT
rJMSF037I06+          ACAAATCACCCTCGTAATACTTTGAGAAATGCAATATGCATAAAAATTTACATTATCTAT
rJMSF017E08+          ACAAATCACCCTCGTAATACTTTGAGAAATGCAATATGCATAAAAATTTACATTATCTAT
rJMSF038K24+          ACAAATCACCCTCGTAATACTTTGAGAAATGCAATATGCATAAAAATTTACATTATCTAT
                      ____________________________________________________________
consensus             ACAAATCACCCTCGTAATACTTTGAGAAATGCAATATGCATAAAAATTTACATTATCTAT
 
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rJMSF018E08+          ATAATTTGTAATAATTGCGTTAATTATTTATATTCATAGACTATCCA             
rJMSF037I06+          ATAATTTGTAATAATTGCGTTAAT                                    
rJMSF017E08+          ATAATTTGTAATAATTGCGTTAATTATTTATATTCATAGACTATCCA             
rJMSF038K24+          ATAATTTGTAATAATTGCGTTAATTATTTATATTCATAGACTATCCATAATTCATACGGA
                      ____________________________________________________________
consensus             ATAATTTGTAATAATTGCGTTAATTATTTATATTCATAGACTATCCATAATTCATACGGA