Contig 012696:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF038E10+                                                             CCAAGTGGA
                      ____________________________________________________________
consensus                                                                CCAAGTGGA
 
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rJMSF038E10+          CAGAGGGGATGAGAATGAAACTGTCCAACTCTCCGAACTGCTTTATGGTCGACATTCCAG
                      ____________________________________________________________
consensus             CAGAGGGGATGAGAATGAAACTGTCCAACTCTCCGAACTGCTTTATGGTCGACATTCCAG
 
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rJMSF038E10+          AGTTGTTTTTATTGGATCAACCCTATTTGCTTTACAACAGCTATCTGGAATAAATGCTGT
                      ____________________________________________________________
consensus             AGTTGTTTTTATTGGATCAACCCTATTTGCTTTACAACAGCTATCTGGAATAAATGCTGT
 
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rJMSF009A01+                                                             GGCAAATGT
rJMSF038E10+          GTTTTATTTCTCTTCAACTGTATTTAGACGTGCTGGAGTATCCTCAAACCTGGCAAATGT
                      ____________________________________________________________
consensus             GTTTTATTTCTCTTCAACTGTATTTAGACGTGCTGGAGTATCCTCAAACCTGGCAAATGT
 
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rJMSF009A01+          TTTCATAGGAGTTGCAAACTTAACAGGCTCAACTGTTGCGTTGATTTTGATGGACAAATT
rJMSF038E10+          TTTCATAGGAGTTGCAAACTTAACAGGCTCAACTGTTGCGTTGATTTTGATGGACAAATT
                      ____________________________________________________________
consensus             TTTCATAGGAGTTGCAAACTTAACAGGCTCAACTGTTGCGTTGATTTTGATGGACAAATT
 
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rJMSF009A01+          AGGAAGGAGAGTTCTCCTCCTTTGGAGCTTTTTGGGCATGGCTGTATCAATGGCACTTCA
rJMSF038E10+          AGGAAGGAGAGTTCTCCTCCTTTGGAGCTTTTTGGGCATGGCTGTATCAATGGCACTTCA
                      ____________________________________________________________
consensus             AGGAAGGAGAGTTCTCCTCCTTTGGAGCTTTTTGGGCATGGCTGTATCAATGGCACTTCA
 
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rJMSF009A01+          AGTTTTTGCTTCAACTATTGCATCAAACTCTGCTGCTTTCTTTCTTTCTGTTGGCGGCAT
rJMSF038E10+          AGTTTTTGCTTCAACTATTGCATCAAACTCTGCTGCTTTCTTTCTTTCTGTTGGCGGCAT
                      ____________________________________________________________
consensus             AGTTTTTGCTTCAACTATTGCATCAAACTCTGCTGCTTTCTTTCTTTCTGTTGGCGGCAT
 
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rJMSF009A01+          GCTCTCTTTTGTCTTAACATTTGCCATTGGTGCTGGTCCAGTTCCTGGTCTCCTCCTGGC
rJMSF038E10+          GCTCTCTTTTGTCTTAACATTTGCCATTGGTGCTGGTCCAGTTCCTGGTCTCCTCCTGGC
                      ____________________________________________________________
consensus             GCTCTCTTTTGTCTTAACATTTGCCATTGGTGCTGGTCCAGTTCCTGGTCTCCTCCTGGC
 
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rJMSF009A01+          TGAAATATTCCCTAGCCGGATTAGGGCAAAAGCTATGGCATTTTGTATGTCAGTGCATTT
rJMSF038E10+          TGAAATATTCCCTAGCCGGATTAGGGCAAAAGCTATGGCATTTTGTATGTCAGTGCATTG
                      ____________________________________________________________
consensus             TGAAATATTCCCTAGCCGGATTAGGGCAAAAGCTATGGCATTTTGTATGTCAGTGCATTT
 
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rJMSF009A01+          GGTGTTCAATTTCCTTGTTGGTTTGCTCTTCTTGCGTTTGCTTGAGAGTCTTGGACCCCA
rJMSF038E10+          GGTGTTCAATTTCCTTGTTGGTTTGCTCTTCTTGCGTTTGCTTGAGAGTCTTGGACCCCA
                      ____________________________________________________________
consensus             GGTGTTCAATTTCCTTGTTGGTTTGCTCTTCTTGCGTTTGCTTGAGAGTCTTGGACCCCA
 
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rJMSF009A01+          GTTGTTATACGCTATGTTTGGTGCCTTCTGCATGATGGCAGTGGGTTTTGTGAAGAAGAA
rJMSF038E10+          GTTGTTATACGCTATGTTTGGTGCCTTCTGCATGATGGCAGTGGGTTTTGTGAAGAAGAA
                      ____________________________________________________________
consensus             GTTGTTATACGCTATGTTTGGTGCCTTCTGCATGATGGCAGTGGGTTTTGTGAAGAAGAA
 
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rJMSF009A01+          TGTGATGGAAACCAAAGGAAAATCACTCCAAGAAATAGAGATTGCTCTTCTCCCCCCAGA
rJMSF038E10+          TGTGATGGAAACCAAAGGAAAATCACTCCAAGAAATAGAGATTGCTCTTCTCCCCCCAGA
                      ____________________________________________________________
consensus             TGTGATGGAAACCAAAGGAAAATCACTCCAAGAAATAGAGATTGCTCTTCTCCCCCCAGA
 
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rJMSF009A01+          ATAGACTATAGAGATTGATATGGTCATAGACTGTAAAACTGGTGACACGTGAAGTAGAGG
rJMSF038E10+          ATAGACTATAGAGATTGATATGGTCATAGACTGTAAAACTGGTGACACGTGAAGTAGAGG
                      ____________________________________________________________
consensus             ATAGACTATAGAGATTGATATGGTCATAGACTGTAAAACTGGTGACACGTGAAGTAGAGG
 
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rJMSF009A01+          CCAGAGGGAGGCATGTACTTGTATTTGGGCTGTTTATACTCAACTTGTCCAGCGTTGCTG
rJMSF038E10+          CCAGAGGGAGGCATGTACTTGTATTTGGGCTGTTTATACTCAACTTGTCCAGCGTTGCTG
                      ____________________________________________________________
consensus             CCAGAGGGAGGCATGTACTTGTATTTGGGCTGTTTATACTCAACTTGTCCAGCGTTGCTG
 
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rJMSF009A01+          TGAGCATGGTTGTCTTACACTCTTACCTTCAAGTCCATGTTATATTGGCTCATAATGAGA
rJMSF038E10+          TGAGCATGGTTGTCTTACACTCTTACCTTCAAGTCCATGTTATATTGGCTCATAATGAGA
                      ____________________________________________________________
consensus             TGAGCATGGTTGTCTTACACTCTTACCTTCAAGTCCATGTTATATTGGCTCATAATGAGA
 
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rJMSF009A01+          ATTTGTACATTGAAATCTATGTATGCTGTATGTAGTATGTACCTT               
rJMSF038E10+          ATTTGTACATTGAAATCTATGTATGCTGTATGTAGTATGTACCTTGATTTTCAGTATGTA
                      ____________________________________________________________
consensus             ATTTGTACATTGAAATCTATGTATGCTGTATGTAGTATGTACCTTGATTTTCAGTATGTA