Contig 012695:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN030K01Sequence617012695 (4)gb|KEH41542.1|3e-89carboxy-terminal processing peptidase-like protein [Medicago truncatula]
JMFS052A07Sequence184012695 (4)
JMSF038D12Sequence608005308 (2)ref|XP_009593389.1|5e-50PREDICTED: carboxyl-terminal-processing peptidase 3, chloroplastic [Nicotiana t896012695 (4)ref|XP_006361384.1|7e-145PREDICTED: C-terminal processing peptidase, chloroplastic-like [Solanum tuberos
JMSF050D02Sequence681005308 (2)ref|XP_009593389.1|8e-49PREDICTED: carboxyl-terminal-processing peptidase 3, chloroplastic [Nicotiana t742012695 (4)gb|KEH41542.1|1e-87carboxy-terminal processing peptidase-like protein [Medicago truncatula]

Alignment

This contig is upended


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JMFS052A07+                                CATAATGGTTCAATTCCTTTTGATTTGCTTGCCCAATGC
JMFN030K01+                                                    TGATTTGCTTGCCCAATGC
                      ____________________________________________________________
consensus                                  CATAATGGTTCAATTCCTTTTGATTTGCTTGCCCAATGC
 
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JMFS052A07+           TATATGTCATCATTTATACATATACACAGAAAGATCCCTCATCTCTAACTAAGCAGTCCG
JMFN030K01+           TATATGTCATCATTTATACATATACACAGAAAGATCCCTCATCTCTAACTAAGCAGACCG
rJMSF050D02-              TGTCATCATTTATACATATACACAGAAAGATCCCTCATCTCTAACTAAGCAGACCG
rJMSF038D12-              TGTCATCATTTATACATATACACAGAAAGATCCCTCATCTCTAACTAAGCAGACCG
                      ____________________________________________________________
consensus             TATATGTCATCATTTATACATATACACAGAAAGATCCCTCATCTCTAACTAAGCAGACCG
 
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JMFS052A07+           TATGCCAAGAATCTTTCCAGTGGTTTTGATCATGTTTGTTCTGTACAAGGTGGTATGTTT
JMFN030K01+           GATGCTAAGAATCTTTCCAGTGGTTTTGATCTTGTTTGTTCTGTACAAGGTGGTATGTTT
rJMSF050D02-          GATGCCAAGAATCTTTCCAGTGGTTTTGATCTTGTTTGTTCTGTACAAGGTGGTATGTTT
rJMSF038D12-          GATGCCAAGAATCTTTCCAGTGGTTTTGATCTTGTTTGTTCTGTACAAGGTGGTATGTTT
                      ____________________________________________________________
consensus             GATGCCAAGAATCTTTCCAGTGGTTTTGATCTTGTTTGTTCTGTACAAGGTGGTATGTTT
 
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JMFS052A07+           CTATGAAAGATGTACAAGATTAAAG                                   
JMFN030K01+           CTATGAAAGATGTACAAGATTAAAGACAATATCCAACTCACGCTCGGCTACCATGATGCA
rJMSF050D02-          CTATGAAAGATGTACAAGATTAAAGACAATATCCAACTCACGCTCGGCTACCATGATGCA
rJMSF038D12-          CTATGAAAGATGTACAAGATTAAAGACAATATCCAACTCACGCTCGGCTACCATGATGCA
                      ____________________________________________________________
consensus             CTATGAAAGATGTACAAGATTAAAGACAATATCCAACTCACGCTCGGCTACCATGATGCA
 
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JMFN030K01+           AGAATCGGCTTCCAAGTCTCTGGGAGAATTCAGGGCCTCAACTGTGCACTGAACATCAGG
rJMSF050D02-          AGAATCGGCTTCCAAGTCTCTGGGAGAATTCAGGGCCTCAACTGTGCACTGAACATCAGG
rJMSF038D12-          AGAATCGGCTTCCAAGTCTCTGGGAGAATTCAGGGCCTCAACTGTGCACTGAACATCAGG
                      ____________________________________________________________
consensus             AGAATCGGCTTCCAAGTCTCTGGGAGAATTCAGGGCCTCAACTGTGCACTGAACATCAGG
 
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JMFN030K01+           TGTGATGCCCACCTGATCAATGTCATGAAGTGCAGGTGACAGATACTTCGCCACCGTCAC
rJMSF050D02-          TGTGATGCCCACCTGATCAATGTCATGAAGTGCAGGTGACAGATACTTCGCCACCGTCAC
rJMSF038D12-          TGTGATGCCCACCTGATCAATGTCATGAAGTGCAGGTGACAGATACTTCGCCACCGTCAC
                      ____________________________________________________________
consensus             TGTGATGCCCACCTGATCAATGTCATGAAGTGCAGGTGACAGATACTTCGCCACCGTCAC
 
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JMFN030K01+           GAACAGAGCCGAACCGTCATGCAGTTGTGTAACACTCTGTATTTTCCCTTTCCCAAAAGT
rJMSF050D02-          GAACAGAGCCGAACCGTCATGCAGTTGTGTAACACTCTGTATTTTCCCTTTCCCAAAAGT
rJMSF038D12-          GAACAGAGCCGAACCGTCATGCAGTTGTGTAACACTCTGTATTTTCCCTTTCCCAAAAGT
                      ____________________________________________________________
consensus             GAACAGAGCCGAACCGTCATGCAGTTGTGTAACACTCTGTATTTTCCCTTTCCCAAAAGT
 
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JMFN030K01+           TTTATGCCCAACGAGAACTGCTCTACCATTGTCATGGAGGGCCCCTGCCAAAATCTCGCT
rJMSF050D02-          TTTATGCCCAACGAGAACTGCTCTACCATTGTCATGGAGGGCCCCTGCCAAAATCTCGCT
rJMSF038D12-          TTTATGCCCAACGAGAACTGCTCTACCATTGTCATGGAGGGCCCCTGCCAAAATCTCGCT
                      ____________________________________________________________
consensus             TTTATGCCCAACGAGAACTGCTCTACCATTGTCATGGAGGGCCCCTGCCAAAATCTCGCT
 
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JMFN030K01+           AGCACTTGCACTTCCCTCATTCACAAGAACAACAAGAGGATCATGTGTTACAGCATGACC
rJMSF050D02-          AGCACTTGCACTTCCCTCATTCACAAGAACAACAAGAGGATCATGTGTTACAGCATGACC
rJMSF038D12-          AGCACTTGCACTTCCCTCATTCACAAGAACAACAAGAGGATCATGTGTTACAGCATGACC
                      ____________________________________________________________
consensus             AGCACTTGCACTTCCCTCATTCACAAGAACAACAAGAGGATCATGTGTTACAGCATGACC
 
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JMFN030K01+           ATCCACCATGCTGATGGGTTGCATGTTACCATCTCGATCAATAGTATTCACAAGAGTCTC
rJMSF050D02-          ATCCACCATGCTGATGGGTTGCATGTTACCATCTCGATCAATAGTATTCACAAGAGTCTC
rJMSF038D12-          ATCCACCATGCTGATGGGTTGCATGTTACCATCTCGATCAATAGTATTCACAAGAGTCTC
                      ____________________________________________________________
consensus             ATCCACCATGCTGATGGGTTGCATGTTACCATCTCGATCAATAGTATTCACAAGAGTCTC
 
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JMFN030K01+           ATCGCCATCGAGCCATAATTGGGCAATGTCAAGTCCCGCTTTGACTAGACCCCCC     
rJMSF050D02-          ATCGCCATCGAGCCATAATTGGGCAATGTCAAGTCCCGCTTTGACTAGACCCCCC     
rJMSF038D12-          ATCGCCATCGAGCCATAATTGGGCAATGTCAAGTCCCGCTTTGACTAGACCCCCCGGGTT
                      ____________________________________________________________
consensus             ATCGCCATCGAGCCATAATTGGGCAATGTCAAGTCCCGCTTTGACTAGACCCCCCGGGTT
 
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rJMSF038D12-          ATTCCGCAAATCTAGTATGTATGACTGTACACCCTGATTTTCCATTTCCTGAACTGTGTT
                      ____________________________________________________________
consensus             ATTCCGCAAATCTAGTATGTATGACTGTACACCCTGATTTTCCATTTCCTGAACTGTGTT
 
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rJMSF038D12-          CTCCATCTCCACTGCAGCAGTCTGGGAGAAAGTCGATAACTTTACATATCCGGTTTTTGA
                      ____________________________________________________________
consensus             CTCCATCTCCACTGCAGCAGTCTGGGAGAAAGTCGATAACTTTACATATCCGGTTTTTGA
 
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rJMSF038D12-          CAAACGACCATCAGACATCCTATGAGTGATGATGGCACTGGATATAGGCGAAAGTTTTAT
                      ____________________________________________________________
consensus             CAAACGACCATCAGACATCCTATGAGTGATGATGGCACTGGATATAGGCGAAAGTTTTAT
 
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rJMSF038D12-          TACTTCACGAGGTAGTTTAACCTCTCTGAGGTCATTTCTTCCTGAGACATTACCACTATG
                      ____________________________________________________________
consensus             TACTTCACGAGGTAGTTTAACCTCTCTGAGGTCATTTCTTCCTGAGACATTACCACTATG
 
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rJMSF038D12-          GACTTTTACTGTGACAGTTGTACCGGGCACGTCCCCTCAATTTCTGTGCTGCTGCTTCAC
                      ____________________________________________________________
consensus             GACTTTTACTGTGACAGTTGTACCGGGCACGTCCCCTCAATTTCTGTGCTGCTGCTTCAC