Contig 012693:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF037O21-                                                         GGCCCCTATAACTT
                      ____________________________________________________________
consensus                                                           GGCCCCTATAACTT
 
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JMSF037O21-           TAAACCCCAAATCACGTGATTCTCTCAGACCAAAAACTTTGGCTTCAATATGGGAAGTGA
                      ____________________________________________________________
consensus             TAAACCCCAAATCACGTGATTCTCTCAGACCAAAAACTTTGGCTTCAATATGGGAAGTGA
 
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JMSF037O21-           ATCTCCTTCCTCTTTTCCATTAAATGCTCCTACACAAACTTCCAACTCTGATGAAATCTT
                      ____________________________________________________________
consensus             ATCTCCTTCCTCTTTTCCATTAAATGCTCCTACACAAACTTCCAACTCTGATGAAATCTT
 
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JMSF037O21-           TATGCACCACAGCTTACACTTCACTCAAAGTCTGAAGGAATTGAAGAGTTTAAGGAAACA
                      ____________________________________________________________
consensus             TATGCACCACAGCTTACACTTCACTCAAAGTCTGAAGGAATTGAAGAGTTTAAGGAAACA
 
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JMSF037O21-           GTTGTACTCAGCAGCAGAGTATTTTGAGGTGTCATATGGGAAAGATGATCAGAAGCAGCT
                      ____________________________________________________________
consensus             GTTGTACTCAGCAGCAGAGTATTTTGAGGTGTCATATGGGAAAGATGATCAGAAGCAGCT
 
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JMSF038O21-                              TTGTTTATGATTACNCCAAAGTATCGGAAACGCTATGTCAA
JMSF037O21-           CGGCCTTATGCAACAATCGTTGTTTATGATTACACCAAAGTATCGGAAACGCTATGTCAA
                      ____________________________________________________________
consensus             CGGCCTTATGCAACAATCGTTGTTTATGATTACACCAAAGTATCGGAAACGCTATGTCAA
 
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JMSF038O21-           TCCNTCTAGGGATACAATGGGTGCCTTACGCAAGTCAGATGAGAACATTACTTTTGANAA
JMSF037O21-           TCCATCTAGGGATACAATGGGTGCCTTACGCAAGTCAGATGAGAACATTACTTTTGAAAA
                      ____________________________________________________________
consensus             TCCATCTAGGGATACAATGGGTGCCTTACGCAAGTCAGATGAGAACATTACTTTTGAAAA
 
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JMSF038O21-           AGCCTCNATCTATTTTCAAGATGACATACACCAGAGTCAGCACAAGCAAGGTCACTGTTT
JMSF037O21-           AGCCTCAATCTATTTTCAAGATGACATACACCAGAGTCAGCACAAGCAAGGTCACTGTTT
                      ____________________________________________________________
consensus             AGCCTCAATCTATTTTCAAGATGACATACACCAGAGTCAGCACAAGCAAGGTCACTGTTT
 
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JMSF038O21-           GACATCAGCTTTTCTAGGAGCAACAACNAAGGCCCTACCTCCCTTGCCTAGGAAAAGGCA
JMSF037O21-           GACATCAGCTTTTCTAGGAGCAACAACAAAGGCCCTACCTCCCTTGCCTAGGAAAAGGCA
                      ____________________________________________________________
consensus             GACATCAGCTTTTCTAGGAGCAACAACAAAGGCCCTACCTCCCTTGCCTAGGAAAAGGCA
 
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JMSF038O21-           ATCAAAGNCATCATCAANAGAAACTTTTCCAAATTCTCTTGCCTTTTCNTTCACNAGAGC
JMSF037O21-           ATCAAAGCCATCATCAATAGAAACTTTTCCAAATTCTCTTGCCTTTTCATTCACAAGAGC
rJMSF037O21+                                                        TCATTCACAAGAGC
                      ____________________________________________________________
consensus             ATCAAAGCCATCATCAATAGAAACTTTTCCAAATTCTCTTGCCTTTTCATTCACAAGAGC
 
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JMSF038O21-           TGCATCCAA                                                   
JMSF037O21-           TGCATCCAACAAAGAAGTGGGGAAACGACCACATTCTCCACTTCGCTTTACACTCAAGCG
rJMSF037O21+          TGCATCCAACAAAGAAGTGGGGAAACGACCACATTCTCCACTTCGCTTTACACTCAAGCG
                      ____________________________________________________________
consensus             TGCATCCAACAAAGAAGTGGGGAAACGACCACATTCTCCACTTCGCTTTACACTCAAGCG
 
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JMSF037O21-           TTCTGGATCATATGCTAATAGATCAACTTCTCCCACTGCTTGCAATAAACAACGGTGTCC
rJMSF038O21+                                                CTTGCAATAANCANCGGTGTCC
rJMSF037O21+          TTCTGGATCATATGCTAATAGATCAACTTCTCCCACTGCTTGCAATAAACAACGGTGTCC
                      ____________________________________________________________
consensus             TTCTGGATCATATGCTAATAGATCAACTTCTCCCACTGCTTGCAATAAACAACGGTGTCC
 
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JMSF037O21-           ATCA                                                        
rJMSF038O21+          ATCAGAGCCGAGGAGAACAGTTCACACATNTATAAATCCAGCAAAAANCACTACNCAAGA
rJMSF037O21+          ATCAGAGCCGAGGAGAACAGTTCACACATCTATAAATCCAGCAAAAAACACTACACAAGA
                      ____________________________________________________________
consensus             ATCAGAGCCGAGGAGAACAGTTCACACATCTATAAATCCAGCAAAAAACACTACACAAGA
 
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rJMSF038O21+          TATGGANCTCCTNTCCAAAAAGAGTNAACATCTNCTCAAAGCNTTGTTTNGCATCACCAG
rJMSF037O21+          TATGGAACTCCTATCCAAAAAGAGTAAACATCTACTCAAAGCATTGCTTAGCATCAACAG
                      ____________________________________________________________
consensus             TATGGAACTCCTATCCAAAAAGAGTAAACATCTACTCAAAGCATTGTTTAGCATCACCAG
 
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rJMSF038O21+          ATCACAAAAAGGAGTACCATCCAGATACCAGGATGACAGGTGAAAGAGCAAAGGAATCAA
rJMSF037O21+          ATCACAAAAAGGAGTACCATCCAGATACCAGGATGACAGGTGAAAGAGCAAAGGAATCAA
                      ____________________________________________________________
consensus             ATCACAAAAAGGAGTACCATCCAGATACCAGGATGACAGGTGAAAGAGCAAAGGAATCAA
 
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rJMSF038O21+          ACCATNTTCTTGATAAGGAATATGGACTGTATTGTATCTTGTAAATACCTGTGTTTTGTT
rJMSF037O21+          ACAATCTACTTGATAAGGAATATGGACTGTATTGTATCTTGTAAATAACTGTGTTTTGTT
                      ____________________________________________________________
consensus             ACCATCTTCTTGATAAGGAATATGGACTGTATTGTATCTTGTAAATACCTGTGTTTTGTT
 
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rJMSF038O21+          CTTGATCAAGTCAAAGAAGAGCCTTTTCATCTGGGATGAAATTGTAACATTTTGGTTTAG
rJMSF037O21+          CTTGATCAAGTCAAAGAAGAGCCTTTTCATCTGGGATGAAATTGTAACATTTTGGTTTAG
                      ____________________________________________________________
consensus             CTTGATCAAGTCAAAGAAGAGCCTTTTCATCTGGGATGAAATTGTAACATTTTGGTTTAG
 
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rJMSF038O21+          TNCCAAAAGATNCAGTAAAGTACTCGTAAATAGGGAGTACTACATTTGGGACATTGTNAG
rJMSF037O21+          TGCCAAAAGATGCAGTAAAGTACTCGTAAATAGGGAGTACTACATTTGGGACATTGTAAG
                      ____________________________________________________________
consensus             TGCCAAAAGATGCAGTAAAGTACTCGTAAATAGGGAGTACTACATTTGGGACATTGTAAG
 
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rJMSF038O21+          AATATNNAATGTTTCTCCNTGCCAGAAACAATCGAATTATGCNCTGTAAAGNTTNAGAAA
rJMSF037O21+          AATATAGAATGTTTCTCCTTGCCAGAAACAATTGAATTATGCACTGTAAAGGTTAAGAAA
                      ____________________________________________________________
consensus             AATATAGAATGTTTCTCCTTGCCAGAAACAATTGAATTATGCACTGTAAAGGTTAAGAAA
 
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rJMSF038O21+          GTGAAGGTCGAACAAAGCCAAAACTGATGCAGGCTAATTTGTAAAAAGTCATGCNGGCT 
rJMSF037O21+          GTGAAGGTCGAACAAAGCCAAAACTGATGCAGGCTAATTTGTAAAAAGTCATGCAGGCTT
                      ____________________________________________________________
consensus             GTGAAGGTCGAACAAAGCCAAAACTGATGCAGGCTAATTTGTAAAAAGTCATGCAGGCTT