Contig 012692:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS135H09+                                           CTGCCTCCAGTTCCTGCCTTCATGCTAG
                      ____________________________________________________________
consensus                                             CTGCCTCCAGTTCCTGCCTTCATGCTAG
 
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JMFS135H09+           ATAACGTTGCAAAGACACCTCTCCCGGGCAGATTTTCGAAACTTTCAACAGCAAGTGAAG
                      ____________________________________________________________
consensus             ATAACGTTGCAAAGACACCTCTCCCGGGCAGATTTTCGAAACTTTCAACAGCAAGTGAAG
 
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JMFS135H09+           GGAGATCTTTCCCTGCACTATGATCTATAACAGCTCTTCCAATTGGGTGAGTAGTACCCT
rJMSF037L07-                                             CTTCCAATTGGGTGAGTAGTACCCT
                      ____________________________________________________________
consensus             GGAGATCTTTCCCTGCACTATGATCTATAACAGCTCTTCCAATTGGGTGAGTAGTACCCT
 
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JMFS135H09+           TCTCCATAGCAGCGGCAACTGCAAGGGCTTCTGTCTCACAAGTGGGTTTACAACAACAAG
rJMSF037L07-          TCTCCATAGCAGCGGCAACTGCAAGGGCTTCTGTCTCACANGTGGGTTTACAACAACAAG
                      ____________________________________________________________
consensus             TCTCCATAGCAGCGGCAACTGCAAGGGCTTCTGTCTCACAAGTGGGTTTACAACAACAAG
 
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JMFS135H09+           CAAATTGTCTCTCCTGACTGCTCATGTGGCCATGGATTGGTTCAATTGCTTTGCACATAA
rJMSF037L07-          CAAATTGTCTCTCCTGACTGCTCATGTGGCCATGGATTGGTTCAATTGCTTTGCACATAA
                      ____________________________________________________________
consensus             CAAATTGTCTCTCCTGACTGCTCATGTGGCCATGGATTGGTTCAATTGCTTTGCACATAA
 
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JMFS135H09+           AATCCCCAGTTGTCAAAGTACCGGTTTTATCAAATGCAATACTGTGGCAAGAAGCTAGAG
rJMSF037L07-          NATCCCCAGTTGTCNAAGTACCGGTTTTATCAAATGCAATACTGNGGCAAGAAGCTAGAG
                      ____________________________________________________________
consensus             AATCCCCAGTTGTCAAAGTACCGGTTTTATCAAATGCAATACTGTGGCAAGAAGCTAGAG
 
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JMFS135H09+           CATCAAGAACTTGCCCACCTTTAAGTAATATTCCCTTTCTAGCACAAGCACTGATAGCTG
rJMSF037L07-          CATCAAGAACTTGCCCACCTTTAAGTAATATTCCCTTTCTAGNANAANCACTGATNGCTG
                      ____________________________________________________________
consensus             CATCAAGAACTTGCCCACCTTTAAGTAATATTCCCTTTCTAGCACAAGCACTGATAGCTG
 
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JMFS135H09+           TCGCATACGCCAATGGAGCCACAGCTAATGCACACGGTGATGCAGCTACCATGAGTCCCA
rJMSF037L07-          TCGCATACGCCAATGGAGCCACAGCTNATGCACACGGTGATGCANCTACCATGAGTCCCA
                      ____________________________________________________________
consensus             TCGCATACGCCAATGGAGCCACAGCTAATGCACACGGTGATGCAGCTACCATGAGTCCCA
 
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JMFS135H09+           GTGCTCTATAAATTGATCCTCTGCAAGCTGAGGTACTAAAGAAGGGCCACCTGAAAAGAA
rJMSF037L07-          NTGCTCTATAAATTGATCCTCTGCANGCTGAGGTACTAAAGAAGGGCCNCCTGAAAAGAA
                      ____________________________________________________________
consensus             GTGCTCTATAAATTGATCCTCTGCAAGCTGAGGTACTAAAGAAGGGCCACCTGAAAAGAA
 
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JMFS135H09+           AAGGTCCAATCACAG-CAACTGAAATGGACAGAAGTACCACAACCTTGCTATACTGCTCC
rJMSF037L07-          AAGGTCCAATCACAGCCAACTGAAATGGACAGAAGTACCACNACCTTGCTATACTGCTCC
                      ____________________________________________________________
consensus             AAGGTCCAATCACAGCCAACTGAAATGGACAGAAGTACCACAACCTTGCTATACTGCTCC
 
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JMFS135H09+           CCAAATTTATCCAGCCATCTTTGAAGCTTTGGTTTACTTAGCTGAGCTTCTTCAGTC   
rJMSF037L07-          CCANATTTATCCANCCATCTTTGANGCTTTGGTTTACTTAGCTGAGCTTCTTTAGTCNAC
                      ____________________________________________________________
consensus             CCAAATTTATCCAGCCATCTTTGAAGCTTTGGTTTACTTAGCTGAGCTTCTTTAGTCNAC
 
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rJMSF037L07-          TGCACAATCCGGCTCAGTGTTGACTCTTTCCATGTCTTCTTGGNCTTCACTATCAACATA
                      ____________________________________________________________
consensus             TGCACAATCCGGCTCAGTGTTGACTCTTTCCATGTCTTCTTGGNCTTCACTATCAACATA
 
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rJMSF037L07-          CCATCCAGGTTCCTTGCACCCCCAGGCATGCTATCCCCAACATTCNTCTCTAAAGGTTTA
                      ____________________________________________________________
consensus             CCATCCAGGTTCCTTGCACCCCCAGGCATGCTATCCCCAACATTCNTCTCTAAAGGTTTA