Contig 012688:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012I05Sequence327002175 (10)emb|CDP08769.1|7e-04unnamed protein product [Coffea canephora]282012688 (3)ref|XP_006339623.1|7e-15PREDICTED: dentin sialophosphoprotein-like [Solanum tuberosum]
JMFS110B12Sequence597012688 (3)ref|XP_006339623.1|2e-38PREDICTED: dentin sialophosphoprotein-like [Solanum tuberosum]
JMSF036N17Sequence586012688 (3)ref|XP_004229883.1|1e-28PREDICTED: uncharacterized protein LOC101247558 isoform X2 [Solanum lycopersicu

Alignment

This contig is upended


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rJMFF012I05+                                         TTNTCAGATGAAGTTTGTGGGTCCAGAGA
JMFS110B12-                                                           TGGGTCCAGAGA
                      ____________________________________________________________
consensus                                            TTNTCAGATGAAGTTTGTGGGTCCAGAGA
 
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rJMFF012I05+          TTATGACTCATATTGACACTCCAAGTCACCAATTTTCTGGAAACATGATGCATCCTCCAT
JMFS110B12-           TTATGACTCATATAGACACTCCGAGAAACCAATTTTCTGGAAACATGATGCATCCTCCAT
                      ____________________________________________________________
consensus             TTATGACTCATATTGACACTCCGAGTCACCAATTTTCTGGAAACATGATGCATCCTCCAT
 
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rJMFF012I05+          TTCATCGCCCCAATCCTGCAGTAACTGGGTTTGATCTTCCTACTCAGCATCCTATGATGC
JMFS110B12-           TTCATCGCCCCAATCCTGCAGTAACTGGGTTTGATCTTCCTACTCAGCATCCTATGATGC
rJMSF036N17+                        CCTGCAGTAACTGGGTTTGATCTTCCTACTCAGCATCCTATGATGC
                      ____________________________________________________________
consensus             TTCATCGCCCCAATCCTGCAGTAACTGGGTTTGATCTTCCTACTCAGCATCCTATGATGC
 
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rJMFF012I05+          AGCAACAGATGCAAATGCCAGGCAATTATCACCATATGCAACAAGACCGTCTGAGGAATG
JMFS110B12-           AGCAACAGATGCAAATGCCAGGCAATTATCACCATATGCAACAAGACCGTCTGAGGAATG
rJMSF036N17+          AGCAACAGATGCAAATGCCAGGCAATTATCACCATATGCAACAAGACCGTCTGAGGAATG
                      ____________________________________________________________
consensus             AGCAACAGATGCAAATGCCAGGCAATTATCACCATATGCAACAAGACCGTCTGAGGAATG
 
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rJMFF012I05+          CTCCATTTCCTCCACATCCTGGCAATCAGCCTGCTGCTGCTTTTCTGCAGGAACCAAACC
JMFS110B12-           CTCCATTTCCTCCACATCCTGGCAATCAGCCTGCTGCTGCTTTTCTGCAGGAACCAAACC
rJMSF036N17+          CTCCATTTCCTCCACATCCTGGCAATCAGCCTGCTGCTGCTTTTCTGCAGGAACCAAACC
                      ____________________________________________________________
consensus             CTCCATTTCCTCCACATCCTGGCAATCAGCCTGCTGCTGCTTTTCTGCAGGAACCAAACC
 
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rJMFF012I05+          CGATGCAAGTATT                                               
JMFS110B12-           CGATGCAAGTATTACCCTTTGGGCCACGACCACATCGTCAACCAAACATCAATGGATTTG
rJMSF036N17+          CGATGCAAGTATTACCCTTTGGGCCACGACCACATCGTCAACCAAACATCAATGGATTTG
                      ____________________________________________________________
consensus             CGATGCAAGTATTACCCTTTGGGCCACGACCACATCGTCAACCAAACATCAATGGATTTG
 
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JMFS110B12-           GGATTCCAATGCCAGTTGATATTAACCGTGGAAGTAATCAACCTGAAGCAATCCAGAAAC
rJMSF036N17+          GGATTCCAATGCCAGTTGATATTAACCGTGGAAGTAATCAACCTGAAGCAATCCAGAAAC
                      ____________________________________________________________
consensus             GGATTCCAATGCCAGTTGATATTAACCGTGGAAGTAATCAACCTGAAGCAATCCAGAAAC
 
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JMFS110B12-           TTCTGGAAATGGAAGTCAGGGCAAAACAGATGCACCCTTTTGCTGCAGGTAATAGCCAAG
rJMSF036N17+          TTCTGGAAATGGAAGTCAGGGCAAAACAGATGCACCCTTTTGCTGCAGGTAATAGCCAAG
                      ____________________________________________________________
consensus             TTCTGGAAATGGAAGTCAGGGCAAAACAGATGCACCCTTTTGCTGCAGGTAATAGCCAAG
 
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JMFS110B12-           GAATGTATGGTCATGAGCTTGATATGGGACTGCGATATAGATAGTTTGATTGGAACTAGT
rJMSF036N17+          GAATGTATGGTCATGAGCTTGATATGGGACTGCGATATAGATAGTTTGATTGGAACTAGT
                      ____________________________________________________________
consensus             GAATGTATGGTCATGAGCTTGATATGGGACTGCGATATAGATAGTTTGATTGGAACTAGT
 
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JMFS110B12-           AATGCTGATGGTACTCAGGTGTATACTATTTGATCATGTGGCATTTAGATGTGAACAGTA
rJMSF036N17+          AATGCTGATGGTACTCAGGTGTATACTATTTGATCATGTGGCATTTAGATGTGAACAGTA
                      ____________________________________________________________
consensus             AATGCTGATGGTACTCAGGTGTATACTATTTGATCATGTGGCATTTAGATGTGAACAGTA
 
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JMFS110B12-           GCATAACTTCAGTTTTCATGTCTGGNAAATGGATGCCTATAGAGA               
rJMSF036N17+          GCATAACTTCAGTTTTCATGTCTGGAAAATGGATGCCTATAGAGAGAAAGCAAGTGGAAG
                      ____________________________________________________________
consensus             GCATAACTTCAGTTTTCATGTCTGGAAAATGGATGCCTATAGAGAGAAAGCAAGTGGAAG
 
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rJMSF036N17+          AAAAGTTAAGTTGTAGTGACATTTCTGGCTAGCTGGCGTGTGCTTCATCTGCCATTTTAT
                      ____________________________________________________________
consensus             AAAAGTTAAGTTGTAGTGACATTTCTGGCTAGCTGGCGTGTGCTTCATCTGCCATTTTAT