Contig 012683:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035L07Sequence595013553 (2)gb|AGX27504.1|7e-18NBS-LRR class resistance protein Fy8-Ry8 [Sesamum indicum]645012683 (2)ref|XP_009603186.1|2e-17PREDICTED: putative late blight resistance protein homolog R1A-3 isoform X2 [Ni
JMSF035O16Sequence691012683 (2)ref|XP_009603186.1|1e-14PREDICTED: putative late blight resistance protein homolog R1A-3 isoform X2 [Ni

Alignment

This contig is upended


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rJMFF035L07+              GCTGAAAAATTTCGCATTCTACGGTCCAGAGTGGAAACTAGAAGATGGTTTGTTTC
rJMSF035O16+                                       CCAGAGTGGAAACTAGAAGATGGTTTGTTTC
                      ____________________________________________________________
consensus                 GCTGAAAAATTTCGCATTCTACGGTCCAGAGTGGAAACTAGAAGATGGTTTGTTTC
 
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rJMFF035L07+          CTAAAGTAAAGCACNTTGTCATTGCACATTCAAATCTCAAATGTTGGAATGCAGATGCTG
rJMSF035O16+          CTAAAGTAAAGCACCTTGTCATTGCACATTCAAATCTCAAATGTTGGAATGCAGATGCTG
                      ____________________________________________________________
consensus             CTAAAGTAAAGCACCTTGTCATTGCACATTCAAATCTCAAATGTTGGAATGCAGATGCTG
 
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rJMFF035L07+          AGAATTTCCCCAAGCTGGAGTGCCTAATCCTGAAATTTTGCTGGGACTTGAAAAAACTTC
rJMSF035O16+          AGAATTTCCCCAAGCTGGAGTGCCTAATCCTGAAATTTTGCTGGGACTTGAAAAAACTTC
                      ____________________________________________________________
consensus             AGAATTTCCCCAAGCTGGAGTGCCTAATCCTGAAATTTTGCTGGGACTTGAAAAAACTTC
 
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rJMFF035L07+          CAATTTACGCTTTTTCAAATGCACTGCGACTAATAGAGATAGACAGTTGTTATCCTTCCC
rJMSF035O16+          CAATTTACGCTTTTTCAAATGCACTGCGACTAATAGAGATAGACAGTTGTTATCCTTCCC
                      ____________________________________________________________
consensus             CAATTTACGCTTTTTCAAATGCACTGCGACTAATAGAGATAGACAGTTGTTATCCTTCCC
 
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rJMFF035L07+          TCGTGAAATCTGCAGAGGAAATGCAAAAAGAGCAACAAGAGCTTGGCAATGATGCGTTTG
rJMSF035O16+          TCGTGAAATCTGCAGAGGAAATGCAAAAAGAGCAACAAGAGCTTGGCAATGATGCGTTTG
                      ____________________________________________________________
consensus             TCGTGAAATCTGCAGAGGAAATGCAAAAAGAGCAACAAGAGCTTGGCAATGATGCGTTTG
 
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rJMFF035L07+          TTATTCGTGATCTTGGAGCTAAGATTGGGTTGCCATACAACGAAAACTCTGAAGAAGAGA
rJMSF035O16+          TTATTCGTGATCTTGGAGCTAAGATTGGGTTGCCATACAACGAAAACTCTGAAGAAGAGA
                      ____________________________________________________________
consensus             TTATTCGTGATCTTGGAGCTAAGATTGGGTTGCCATACAACGAAAACTCTGAAGAAGAGA
 
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rJMFF035L07+          ATGAAAGCTGTGAATAAGTAAAAACTGCTTGCAGGCAAGGT                   
rJMSF035O16+          ATGAAAGCTGTGAATAAGTAAAAACTGCTTGCAGGCAAGGTAGAAGAAGAAGAATTCACG
                      ____________________________________________________________
consensus             ATGAAAGCTGTGAATAAGTAAAAACTGCTTGCAGGCAAGGTAGAAGAAGAAGAATTCACG
 
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rJMSF035O16+          TTTGTTGAGGTCTTGCAATGGCAGATGATTCCTCAAGAAGCTGCAAGTTCATTAGGAGCG
                      ____________________________________________________________
consensus             TTTGTTGAGGTCTTGCAATGGCAGATGATTCCTCAAGAAGCTGCAAGTTCATTAGGAGCG
 
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rJMSF035O16+          CGCAAATTTCTTTCTAATCTTGTCTTGATTGTTGAAGTCCTGTGTGTTTTTCTCTGCTGT
                      ____________________________________________________________
consensus             CGCAAATTTCTTTCTAATCTTGTCTTGATTGTTGAAGTCCTGTGTGTTTTTCTCTGCTGT
 
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rJMSF035O16+          TCTTGAATTTTCACACTCTCTTGTTACAGATGTTCATTGTGATTGTTATCTATATTGCTA
                      ____________________________________________________________
consensus             TCTTGAATTTTCACACTCTCTTGTTACAGATGTTCATTGTGATTGTTATCTATATTGCTA
 
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rJMSF035O16+          GGGACATCGAAATTACACACTGATGTTCAAATTCCATATCTCCAGAATTAGTTGGTGTAT
                      ____________________________________________________________
consensus             GGGACATCGAAATTACACACTGATGTTCAAATTCCATATCTCCAGAATTAGTTGGTGTAT
 
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rJMSF035O16+          ATTAGAACCAAGATTGAAGATCATTCCCACTATTTCATAAATCTTTGATTTTGCAGCGGA
                      ____________________________________________________________
consensus             ATTAGAACCAAGATTGAAGATCATTCCCACTATTTCATAAATCTTTGATTTTGCAGCGGA