Contig 012681:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF035I17-                                         GGGAGGAGGAAGCCGTCGTGGAGGGAGAGG
JMFN028G10-                      GGGCGGGGGGAGCGGGAGCGGGAGGAGGAAGCCGTCGTGGAGGGAGAGG
                      ____________________________________________________________
consensus                        GGGCGGGGGGAGCGGGAGCGGGAGGAGGAAGCCGTCGTGGAGGGAGAGG
 
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JMSF035I17-           GAGAATAACAGGAGGAGAGAGAGGAGGAGGAGAGCCATGGCGGCGAATATATACACAGGG
JMFN028G10-           GAGAATAACAGGAGGAGAGAGAGGAGGAGGAGAGCCATGGCGGCGAAGATATACACAGGG
                      ____________________________________________________________
consensus             GAGAATAACAGGAGGAGAGAGAGGAGGAGGAGAGCCATGGCGGCGAATATATACACAGGG
 
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JMSF035I17-           TTGAGAGCTCAGGGGAACTACNATCTCCCCAAGCACTGTGACAACAACGAGGTTCTCAAG
JMFN028G10-           TTGAGAGCTCAGGGGAACTACAATCTCCCCAAGCACTGTGACAACAACGAGGTTCTCAAG
                      ____________________________________________________________
consensus             TTGAGAGCTCAGGGGAACTACAATCTCCCCAAGCACTGTGACAACAACGAGGTTCTCAAG
 
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JMSF035I17-           GCGCTGTGTGCTGAGGCTGGCTGGATCGTCGAGCCCGATGGCACCACCTATCGCAATGGA
JMFN028G10-           GCGCTGTGTGCTGAGGCTGGCTGGATCGTCGAGCCCGATGGCACCACCTATCGCAATGGA
                      ____________________________________________________________
consensus             GCGCTGTGTGCTGAGGCTGGCTGGATCGTCGAGCCCGATGGCACCACCTATCGCAATGGA
 
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JMSF035I17-           GGGAGGCCAACCCCAATGGAGATTGGAGGCACTTCAACCAACATCACCCCAGGCTCTTCC
JMFN028G10-           GGGAGGCCAACCCCAATGGAGATTGGAGGCACTTCAACCAACATCACCCCAGGCTCTTCC
                      ____________________________________________________________
consensus             GGGAGGCCAACCCCAATGGAGATTGGAGGCACTTCAACCAACATCACCCCAGGCTCTTCC
 
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JMSF035I17-           AGGAATCCTAGCCCGCCATCTTCATACTTTGCTAGTCCTATTCCGTCTTACCAACCCAGT
JMFN028G10-           AGGAATCCTAGCCCGCCATCTTCATACTTTGCTAGTCCTATTCCGTCTTACCAACCCAGT
rJMSF023C09+                                                              AACCCAGT
                      ____________________________________________________________
consensus             AGGAATCCTAGCCCGCCATCTTCATACTTTGCTAGTCCTATTCCGTCTTACCAACCCAGT
 
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JMSF035I17-           CCCTTATCGTCCTCTTGTCCGAGTCCAACCCATGGTGATGCCAATGTGTCACCGTATCCT
JMFN028G10-           CCCTTATCGTCCTCTTGTCCGAGTCCAACCCATGGTGATGCCAATGTGTCACCGTATCCT
rJMSF023C09+          CCCTTATCGTCCTCTTGTCCGAGTCCAACCCATGGTGATGCCAATGTGTCACCGTATCCT
rJMSF035I17+                                             TGATGCCAATGTGTCACCGTATCCT
                      ____________________________________________________________
consensus             CCCTTATCGTCCTCTTGTCCGAGTCCAACCCATGGTGATGCCAATGTGTCACCGTATCCT
 
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JMSF035I17-           TTTGCTTTTCTCCGTAATTCCCTCCCTCCCCTACNGATATCAAACAGTGCTCCTGTAACG
JMFN028G10-           TTTGCTTTTCTCCGTAATTCCCTCCCTCCCCTACGGATATCAAACAGTGCTCCTGTAACG
rJMSF023C09+          TTTGCTTTTCTCCGTAATTCCCTCCCTCCCCTACGGATATCAAACAGTGCTCCTGTAACG
rJMSF035I17+          TTTGCTTTTCTCCGTAATTCCCTCCCTCCCCTACGGATATCAAACAGTGCTCCTGTAACG
                      ____________________________________________________________
consensus             TTTGCTTTTCTCCGTAATTCCCTCCCTCCCCTACGGATATCAAACAGTGCTCCTGTAACG
 
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JMSF035I17-           CCACCTCTGTCTTCACCAACCAGAGTTCATAAGCCAACTTTCNTTCTGGAGAATTTGACC
JMFN028G10-           CCACCTCTGTCTTCACCAACCAGAGTTCATAAGCCAACTTTCAATCTGGAGAATTTGACC
rJMSF023C09+          CCACCTCTGTCTTCACCAACCAGAGTTCATAAGCCAACTTTCAATCTGGAGAATTTGACC
rJMSF035I17+          CCACCTCTGTCTTCACCAACCAGAGTTCATAAGCCAACTTTCAATCTGGAGAATTTGACC
                      ____________________________________________________________
consensus             CCACCTCTGTCTTCACCAACCAGAGTTCATAAGCCAACTTTCAATCTGGAGAATTTGACC
 
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JMSF035I17-           AAAGAGTCCATGTCTGCCCTCAACATTCCTCTCTTCGC                      
JMFN028G10-           AAAGAGTCCATGTCTGCCCTCAACATTCCTCTCTTCGCTTCTTGCCCCACCAATCCAACT
rJMSF023C09+          AAAGAGTCCATGTCTGCCCTCAACATTCCTCTCTTCGCTTCTTGCCCCACCAGTCCAACT
rJMSF035I17+          AAAGAGTCCATGTCTGCCCTCAACATTCCTCTCTTCGCTTCTTGCCCCACCAGTCCAACT
                      ____________________________________________________________
consensus             AAAGAGTCCATGTCTGCCCTCAACATTCCTCTCTTCGCTTCTTGCCCCACCAGTCCAACT
 
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JMFN028G10-           CGTGGCCATCGCCTCCCTGCTACTATTCC                               
rJMSF023C09+          CGTGGCCATCGCTTCCCTGCTACTATTCCAGAATGCGACGAGTCAGAAACATCCACTGTT
rJMSF035I17+          CGTGGCCATCGCTTCCCTGCTACTATTCCAGAATGCGACGAGTCAGAAACATCCACTGTT
                      ____________________________________________________________
consensus             CGTGGCCATCGCTTCCCTGCTACTATTCCAGAATGCGACGAGTCAGAAACATCCACTGTT
 
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rJMSF023C09+          GATTCAGAGCAGTGGATGAGCTTACAGAAGTGTGGCCCTAATGCAGTTCCTACTTCCCCT
rJMSF035I17+          GATTCAGAGCAGTGGATGAGCTTACAGAAGTGTGGCCCTAATGCAGTTCCTACTTCCCCT
                      ____________________________________________________________
consensus             GATTCAGAGCAGTGGATGAGCTTACAGAAGTGTGGCCCTAATGCAGTTCCTACTTCCCCT
 
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rJMSF023C09+          ACTTTCAATCTCGTGAAACCAGTTGCTCAGCGAATTCCTCCTAACAGCATGATGTTCGAT
rJMSF035I17+          ACTTTCAATCTCGTGAAACCAGTTGCTCAGCGAATTCCTCCTAACAGCATGATGTTCGAT
                      ____________________________________________________________
consensus             ACTTTCAATCTCGTGAAACCAGTTGCTCAGCGAATTCCTCCTAACAGCATGATGTTCGAT
 
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rJMSF023C09+          AAGGGTAAAAGCATCGATTTTGGGTTTGAGAATGTGGCAATGAAGGCGTGGGAAGGGGAA
rJMSF035I17+          AAGGGTAAAAGCATCGATTTTGGGTTTGAGAATGTGGCAATGAAGGCGTGGGAAGGGGAA
                      ____________________________________________________________
consensus             AAGGGTAAAAGCATCGATTTTGGGTTTGAGAATGTGGCAATGAAGGCGTGGGAAGGGGAA
 
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rJMSF023C09+          AGAGCCCACGAGGTTGGATTGGACGATCTGGAGCTCAAACTTGGAAACGGCAGTACTCGT
rJMSF035I17+          AGAGCCCACGAGGTTGGATTGGACGATCTGGAGCTCAAACTTGGAAACGGCAGTACTCGT
                      ____________________________________________________________
consensus             AGAGCCCACGAGGTTGGATTGGACGATCTGGAGCTCAAACTTGGAAACGGCAGTACTCGT
 
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rJMSF023C09+          ATATGAGAGAGGCTCATCAAAGAGATCTGCTCTGCATCTTGCAGAAACAATTCAGATAGC
rJMSF035I17+          ATATGAGAGAGGCTCATCAAAGAGATCTGCTCTGCATCTTGCAGAAACAATTCAGATAGC
                      ____________________________________________________________
consensus             ATATGAGAGAGGCTCATCAAAGAGATCTGCTCTGCATCTTGCAGAAACAATTCAGATAGC
 
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rJMSF023C09+          GCATTTCTGTGTTTCTTTTTAATTTAAATACAGCAAAAATTAATAGGGTACTTTCAGTTT
rJMSF035I17+          GCATTTCTGTGTTTCTTTTTAATTTAAATACAGCAAAAATTAATAGGGTACTTTCAGTTT
                      ____________________________________________________________
consensus             GCATTTCTGTGTTTCTTTTTAATTTAAATACAGCAAAAATTAATAGGGTACTTTCAGTTT
 
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rJMSF023C09+          TCCCATGTGAAAATGTAGATTGTGAACTCAACTGCTTTCTAGGGTT              
rJMSF035I17+          TCCCATGTGAAAATTTAGATTGTGAACTCAACTGCTTTCTAGGGTTTGAAATCTCCTCGT
                      ____________________________________________________________
consensus             TCCCATGTGAAAATTTAGATTGTGAACTCAACTGCTTTCTAGGGTTTGAAATCTCCTCGT