Contig 012677:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF034G12Sequence625012677 (2)ref|XP_002278020.1|288PREDICTED: uncharacterized protein LOC100253998 [Vitis vinifera]707012677 (2)ref|XP_010062144.1|1e-99PREDICTED: uncharacterized protein LOC104449618 isoform X2 [Eucalyptus grandis]

Alignment

This contig is upended


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JMSF034G12-                 GATGGCGGGCGTTGCAACGGATCGGCCTGTCCTCGGCATCGGCAAGAGGCGCAT
                      ____________________________________________________________
consensus                   GATGGCGGGCGTTGCAACGGATCGGCCTGTCCTCGGCATCGGCAAGAGGCGCAT
 
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JMSF034G12-           GTTTGCTCACTGCCCCGCGCATGTTANCTGCCGCCGCTCCTTCACCTATGGTGTTGGTAC
                      ____________________________________________________________
consensus             GTTTGCTCACTGCCCCGCGCATGTTANCTGCCGCCGCTCCTTCACCTATGGTGTTGGTAC
 
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JMSF034G12-           GGCGTGATTCANAGCTCAGATTTTTATTCTATCCNACGCANGTGCGGNCCGCCGTCGAGG
                      ____________________________________________________________
consensus             GGCGTGATTCANAGCTCAGATTTTTATTCTATCCNACGCANGTGCGGNCCGCCGTCGAGG
 
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JMSF034G12-           AANCTCACGANTCNGGCCGCTAGAACTGANTCAAAAGGTGTCTCTCTTGGATTCANAGCT
                      ____________________________________________________________
consensus             AANCTCACGANTCNGGCCGCTAGAACTGANTCAAAAGGTGTCTCTCTTGGATTCANAGCT
 
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JMSF034G12-           CCACATTTCGAGCTTTCTGAACCGTTAACCGGGAGAGTGTGGAATCTAGAAGACTTTGAG
                      ____________________________________________________________
consensus             CCACATTTCGAGCTTTCTGAACCGTTAACCGGGAGAGTGTGGAATCTAGAAGACTTTGAG
 
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JMSF034G12-           CCATATCCTGCTTTGCTGGTTATGTTCATTTGCAATCATTGTCCATTTGTCAAACACCTG
rJMSF034G12+                       TGCTGGTTATGTTCATTTGCAATCATTGTCCATTTGTCAAACACCTG
                      ____________________________________________________________
consensus             CCATATCCTGCTTTGCTGGTTATGTTCATTTGCAATCATTGTCCATTTGTCAAACACCTG
 
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JMSF034G12-           AAGAAAGATATTGTAAAACTTTCCAATTTCTATATGAAGAAGGACCTTGCTGTTGTTGCT
rJMSF034G12+          AAGAAAGATATTGTAAAACTTTCCAATTTCTATATGAAGAAGGACCTTGCTGTTGTTGCT
                      ____________________________________________________________
consensus             AAGAAAGATATTGTAAAACTTTCCAATTTCTATATGAAGAAGGACCTTGCTGTTGTTGCT
 
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JMSF034G12-           ATATCATCAAACTCTGCAGCTACTCATCCTCAGGATGGACCAGAATTCATGGCAGAAGAA
rJMSF034G12+          ATATCATCAAACTCTGCAGCTACTCATCCTCAGGATGGACCAGAATTCATGGCAGAAGAA
                      ____________________________________________________________
consensus             ATATCATCAAACTCTGCAGCTACTCATCCTCAGGATGGACCAGAATTCATGGCAGAAGAA
 
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JMSF034G12-           GCTAAACAGTTCAATTATCCTTTCCCATATCTCTATGATGAGTCACAAGATGTTGCAAGA
rJMSF034G12+          GCTAAACAGTTCAATTATCCTTTCCCATATCTCTATGATGAGTCACAAGATGTTGCAAGA
                      ____________________________________________________________
consensus             GCTAAACAGTTCAATTATCCTTTCCCATATCTCTATGATGAGTCACAAGATGTTGCAAGA
 
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JMSF034G12-           GATTTTGGAGCTGTTTGCACACCGGAGTTTTTCCTATTCAAAAAGGATGGACGAAGGCCC
rJMSF034G12+          GATTTTGGAGCTGTTTGCACACCGGAGTTTTTCCTATTCAAAAAGGATGGACGAAGGCCC
                      ____________________________________________________________
consensus             GATTTTGGAGCTGTTTGCACACCGGAGTTTTTCCTATTCAAAAAGGATGGACGAAGGCCC
 
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JMSF034G12-           TTTGAACTAGTTTATCATGGTCAATTTGATG                             
rJMSF034G12+          TTTGAACTAGTTTATCATGGTCAATTTGATGATTCAAGACCAAGTAATAATGTCCCAGTT
                      ____________________________________________________________
consensus             TTTGAACTAGTTTATCATGGTCAATTTGATGATTCAAGACCAAGTAATAATGTCCCAGTT
 
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rJMSF034G12+          ACTGGAAGGGACTTGAGCCTAGCAATAGATTGTGTACTCAGTGGCCAACCAGTTTCATCT
                      ____________________________________________________________
consensus             ACTGGAAGGGACTTGAGCCTAGCAATAGATTGTGTACTCAGTGGCCAACCAGTTTCATCT
 
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rJMSF034G12+          GCTCAAAAACCTAGTGTTGGATGCAGCATAAAATGGCATCCTGGAGAAAAGCCGTAATTA
                      ____________________________________________________________
consensus             GCTCAAAAACCTAGTGTTGGATGCAGCATAAAATGGCATCCTGGAGAAAAGCCGTAATTA
 
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rJMSF034G12+          GGAATTCTCATCTTGGCTCTCTCTGTTGTTGCCTGCACTGAGTTAAAGGTGCACCAGAAT
                      ____________________________________________________________
consensus             GGAATTCTCATCTTGGCTCTCTCTGTTGTTGCCTGCACTGAGTTAAAGGTGCACCAGAAT
 
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rJMSF034G12+          TACTGTAGCAGAGCTGATCTTTTGGAGGATTCAGACATTTTGTAATTTTGATGTAATGGC
                      ____________________________________________________________
consensus             TACTGTAGCAGAGCTGATCTTTTGGAGGATTCAGACATTTTGTAATTTTGATGTAATGGC
 
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rJMSF034G12+          TCTTCTGTAATTTCATGTGTTTGACCTGTGAACTCTATGTTCACACCTATTGGAAGTTAT
                      ____________________________________________________________
consensus             TCTTCTGTAATTTCATGTGTTTGACCTGTGAACTCTATGTTCACACCTATTGGAAGTTAT
 
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rJMSF034G12+          TCTACTCATGTAGAGCTCCCTCTTGCTATTGTAATGGTGACTTCTATTTAACCAAGAATG
                      ____________________________________________________________
consensus             TCTACTCATGTAGAGCTCCCTCTTGCTATTGTAATGGTGACTTCTATTTAACCAAGAATG