| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015N09 | Sequence | 557 | 009439 (9) | dbj|BAD18102.1| | 3e-06 | leucine-rich repeat receptor-like kinase [Ipomoea batatas] | 753 | 012674 (9) | dbj|BAD18097.1| | 2e-115 | putative serine/threonine protein kinase [Ipomoea batatas] |
| JMFF026F15 | Sequence | 578 | 009439 (9) | dbj|BAD18102.1| | 7e-17 | leucine-rich repeat receptor-like kinase [Ipomoea batatas] | 733 | 012674 (9) | dbj|BAD18097.1| | 2e-105 | putative serine/threonine protein kinase [Ipomoea batatas] |
| JMSF006L15 | Sequence | 377 | 009439 (9) | 325 | 012674 (9) | dbj|BAD18097.1| | 1e-10 | putative serine/threonine protein kinase [Ipomoea batatas] | |||
| JMSF007A24 | Sequence | 752 | 012674 (9) | dbj|BAD18097.1| | 3e-142 | putative serine/threonine protein kinase [Ipomoea batatas] | |||||
| JMSF009N01 | Sequence | 398 | 019922 | dbj|BAD18102.1| | 1e-13 | leucine-rich repeat receptor-like kinase [Ipomoea batatas] | 744 | 012674 (9) | dbj|BAD18097.1| | 2e-137 | putative serine/threonine protein kinase [Ipomoea batatas] |
| JMSF025J12 | Sequence | 630 | 009439 (9) | dbj|BAD18102.1| | 2e-24 | leucine-rich repeat receptor-like kinase [Ipomoea batatas] | 793 | 012674 (9) | dbj|BAD18097.1| | 7e-158 | putative serine/threonine protein kinase [Ipomoea batatas] |
| JMSF033L24 | Sequence | 635 | 009439 (9) | dbj|BAD18102.1| | 9e-24 | leucine-rich repeat receptor-like kinase [Ipomoea batatas] | 638 | 012674 (9) | dbj|BAD18097.1| | 1e-40 | putative serine/threonine protein kinase [Ipomoea batatas] |
| JMSF041N05 | Sequence | 793 | 009439 (9) | dbj|BAD18102.1| | 2e-87 | leucine-rich repeat receptor-like kinase [Ipomoea batatas] | 628 | 012674 (9) | dbj|BAD18097.1| | 5e-87 | putative serine/threonine protein kinase [Ipomoea batatas] |
| JMSF043E02 | Sequence | 703 | 009439 (9) | dbj|BAD18102.1| | 4e-45 | leucine-rich repeat receptor-like kinase [Ipomoea batatas] | 690 | 012674 (9) | dbj|BAD18097.1| | 3e-67 | putative serine/threonine protein kinase [Ipomoea batatas] |
This contig is upended
. : . : . : . : . : . :
rJMSF009N01+ AGGAAAAGGATAGCGTTAGG
____________________________________________________________
consensus AGGAAAAGGATAGCGTTAGG
. : . : . : . : . : . :
rJMSF009N01+ AATAGCACGGGGTTTGGTGTATTTGCACGAGCAGTGTGACCCGAAAATCATCCACCGTGA
rJMSF025J12+ TGGTGTATTTGCATGAGCAGTGTGACCCGAAAATCATCCATCGTGA
rJMSF007A24+ TCATCCATCGTGA
____________________________________________________________
consensus AATAGCACGGGGTTTGGTGTATTTGCATGAGCAGTGTGACCCGAAAATCATCCATCGTGA
. : . : . : . : . : . :
rJMSF009N01+ TGTCAAAGCAGCCAACATTCTACTGGATGAATACTTCGAGGCAGTTGTTGGGGATTTCGG
rJMSF025J12+ TGTCAAAGCGGCCAACATTCTGTTGGATGAAGACTTTGAGGCAGTTGTTGGAGATTTTGG
rJMSF007A24+ TGTCAAAGCGGCCAACATTCTGTTGGATGAAGACTTTGAGGCAGTTGTTGGAGATTTTGG
rJMFF015N09+ TGGATGAAGACTNTGAGGCAGTTGTTGGAGATTTTGG
____________________________________________________________
consensus TGTCAAAGCGGCCAACATTCTGTTGGATGAAGACTTTGAGGCAGTTGTTGGAGATTTTGG
. : . : . : . : . : . :
rJMSF009N01+ GTTGGCAAAGCTCTTGGATCACCGCGAGTCT-CACGTGTCTACTGCTGTCCGTGGAACTA
rJMSF025J12+ GTTGGCGAAGCTATTGGATCACCGCGAATCT-CATGTGTCTACTGCTGTTCGGGGCACTG
rJMSF007A24+ GTTGGCGAAGCTATTGGATCACCGCGAATCT-CATGTGTCTACTGCTGTTCGGGGCACTG
rJMFF015N09+ GTTGGCGAAGCTATTGGATCACCGCGAATCTCCATGTGTCTACTGCTGTTCGGGGCACTG
____________________________________________________________
consensus GTTGGCGAAGCTATTGGATCACCGCGAATCT-CATGTGTCTACTGCTGTTCGGGGCACTG
. : . : . : . : . : . :
rJMSF009N01+ TTGGCCACATCGCTCCAGAATACTTATCGACAGGCCAATCTTCCGAAAAGACTGATGTGT
rJMSF025J12+ TCGGACACATTGCACCCGAGTATTTGTCGACAGGCCAATCATCCGAAAAGACTGATGTAT
rJMSF007A24+ TCGGACACATTGCACCCGAGTATTTGTCGACAGGCCAATCATCCGAAAAGACTGATGTAT
rJMFF015N09+ TCGGACACATTGCACCCGAGTATTTGTCGACAGGCCAATCATCCGAAAAGACTGATGTAT
rJMFF026F15+ ACATTGCACCCGAGTATTTGTCGACAGGCCAATCATCCGAAAAGACTGATGTAT
____________________________________________________________
consensus TCGGACACATTGCACCCGAGTATTTGTCGACAGGCCAATCATCCGAAAAGACTGATGTAT
. : . : . : . : . : . :
rJMSF009N01+ TTGGGTTCGGGATCTTGCTTCTTGAGTTAATTACTGGCCAGAAAGCTGTTGAATTCGGGA
rJMSF025J12+ TTGGTTTTGGTATCCTGCTTCTTGAACTAATTACTGGTCAGAAAGCTGTGGACTTTGGGC
rJMSF007A24+ TTGGTTTTGGTATCCTGCTTCTTGAACTAATTACTGGTCAGAAAGCTGTGGACTTTGGGC
rJMFF015N09+ TTGGTTTTGGTATCCTGCTTCTTGAACTAATTACTGGTCAGAAAGCTGTGGACTTTGGGC
rJMSF041N05+ TGAACTAATTACTGGTCAGAAAGCTGTGGACTTTGGGC
rJMFF026F15+ TTGGTTTTGGTATCCTGCTTCTTGAACTAATTACTGGTCAGAAAGCTGTGGACTTTGGGC
____________________________________________________________
consensus TTGGTTTTGGTATCCTGCTTCTTGAACTAATTACTGGTCAGAAAGCTGTGGACTTTGGGC
. : . : . : . : . : . :
rJMSF009N01+ AAGGGACAAACCAGAAAGTAGTAATGCTTGATTTGGTAAAAAGGCTGCATCAAGAAAGGA
rJMSF025J12+ GAGGGGCTAACCAGAAAGGAGTAATACTTGACTGGGTAAAAACCCTCCATCAAGAAGGGA
rJMSF007A24+ GAGGGGCTAACCAGAAAGGAGTAATACTTGACTGGGTAAAAACCCTCCATCAAGAAGGGA
rJMFF015N09+ GAGGGGCTAACCAGAAAGGAGTAATACTTGACTGGGTAAAAACCCTCCATCAAGAAGGGA
rJMSF041N05+ GAGGGGCTAACCAGAAAGGAGTAATACTTGACTGGGTAAAAACCCTCCATCAAGAAGGGA
rJMFF026F15+ GAGGGGCTAACCAGAAAGGAGTAATACTTGACTGGGTAAAAACCCTCCATCAAGAAGGGA
____________________________________________________________
consensus GAGGGGCTAACCAGAAAGGAGTAATACTTGACTGGGTAAAAACCCTCCATCAAGAAGGGA
. : . : . : . : . : . :
rJMSF009N01+ AGTTGAGCTTAATGGTGGACAAAGATCTGGGAACCAATTTCGACAGGATTGAATTAGAAG
rJMSF025J12+ AATTGAACTTGATGGTGGACAAAGATTTGAAGAACAATTTTGACAGGGTTGAACTAGAAG
rJMSF007A24+ AATTGAACTTGATGGTGGACAAAGATTTGAAGAACAATTTTGACAGGGTTGAACTAGAAG
rJMFF015N09+ AATTGAACTTGATGGTGGACAAAGATTTGAAGAACAATTTTGACAGGGTTGAACTAGAAG
rJMSF041N05+ AATTGAACTTGATGGTGGACAAAGATTTGAAGAACAATTTTGACAGGGTTGAACTAGAAG
rJMSF043E02+ GGGTTGAACTAGAAG
rJMFF026F15+ AATTGAACTTGATGGTGGACAAAGATTTGAAGAACAATTTTGACAGGGTTGAACTAGAAG
____________________________________________________________
consensus AATTGAACTTGATGGTGGACAAAGATTTGAAGAACAATTTTGACAGGGTTGAACTAGAAG
. : . : . : . : . : . :
rJMSF009N01+ AAATGGTTCAGGTTGCCCTTCTATGCACCCAGTTTAACCCTTGTCATCGCCCGAAAATGT
rJMSF025J12+ AGATGGTTCAGGTTGCCCTCCTTTGCACCCAGTTCAATCCTTCTCATAGACCAAAAATGT
rJMSF007A24+ AGATGGTTCAGGTTGCCCTCCTTTGCACCCAGTTCAATCCTTCTCATAGACCAAAAATGT
rJMFF015N09+ AGATGGTTCAGGTTGCCCTCCTTTGCACCCAGTTCAATCCTTCTCATAGACCAAAAATGT
rJMSF041N05+ AGATGGTTCAGGTTGCCCTCCTTTGCACCCAGTTCAATCCTTCTCATAGACCAAAAATGT
rJMSF043E02+ AGATGGTTCAGGTTGCCCTCCTTTGCACCCAGTTCAATCCTTCTCATAGACCAAAAATGT
rJMFF026F15+ AGATGGTTCAGGTTGCCCTCCTTTGCACCCAGTTCAATCCTTCTCATAGACCAAAAATGT
rJMSF033L24+ CTTTGCACCCAGTTCAATCCTTCTCATAGACCAAAAATGT
____________________________________________________________
consensus AGATGGTTCAGGTTGCCCTCCTTTGCACCCAGTTCAATCCTTCTCATAGACCAAAAATGT
. : . : . : . : . : . :
rJMSF009N01+ CTGAAGTGTTAAGGATGTTGGAAGGTGATGGCTTAGCCGAAAAATGGGAGGCTTCACAG
rJMSF025J12+ CGGAAGTGCTAAGGATGCTGGAAGGCGACGGCCTAGCTGAAAAATGGGAGGCTTCACAGA
rJMSF007A24+ CGGAAGTGCTAAGGATGCTGGAAGGCGACGGCCTAGCTGAAAAATGGGAGGCTTCACAGA
rJMFF015N09+ CGGAAGTGCTAAGGATGCTGGAAGGCGACGGCCTAGCTGAAAAATGGGAGGCTTCACAGA
rJMSF041N05+ CGGAAGTGCTAAGGATGCTGGAAGGCGACGGCCTAGCTGAAAAATGGGAGGCTTCACAGA
rJMSF043E02+ CGGAAGTGCTAAGGATGCTGGAAGGCGACGGCCTAGCTGAAAAATGGGAGGCTTCACAGA
rJMFF026F15+ CGGAAGTGCTAAGGATGCTGGAAGGCGACGGCCTAGCTGAAAAATGGGAGGCTTCACAGA
rJMSF033L24+ CGGAAGTGCTAAGGATGCTGGAAGGCGACGGCCTAGCTGAAAAATGGGAGGCTTCACAGA
____________________________________________________________
consensus CGGAAGTGCTAAGGATGCTGGAAGGCGACGGCCTAGCTGAAAAATGGGAGGCTTCACAGA
. : . : . : . : . : . :
rJMSF025J12+ GAAACGACACTCCAAGGTTTCGCACTCATGAAAATACGCCCCAAAGATACTCCGATTTCA
rJMSF007A24+ GAAACGACACTCCAAGGTTTCGCACTCATGAAAATACGCCCCAAAGATACTCCGATTTCA
rJMFF015N09+ GAAACGACACTCCAAGGTTTCGCACTCATGAAAATACGCCCCAAAGATACTCCGATTTCA
rJMSF006L15+ CGCACTCATGAAAATACGCCCCAAAGATACTCCGATTTCA
rJMSF041N05+ GAAACGACACTCCAAGGTTTCGCACTCATGAAAATACGCCCCAAAGATACTCCGATTTCA
rJMSF043E02+ GAAACGACACTCCAAGGTTTCGCACTCATGAAAATACGCCCCAAAGATACTCCGATTTCA
rJMFF026F15+ NAAACGACACTCCAAGGTTTCGCACTCATGAAAATACGCCCCAAAGATACTCCGATTTCA
rJMSF033L24+ GAAACGACACTCCAAGGTTTCGCACTCATGAAAATACGCCCCAAAGATACTCCGATTTCA
____________________________________________________________
consensus GAAACGACACTCCAAGGTTTCGCACTCATGAAAATACGCCCCAAAGATACTCCGATTTCA
. : . : . : . : . : . :
rJMSF025J12+ TAGAAGAGTCCTCTCTAATCGTCGAAGCAATGGAGCTGTCTGGACCTAGATGACAAGCTG
rJMSF007A24+ TAGAAGAGTCCTCTCTAATCGTCGAAGCAATGGAGCTGTCTGGACCTAGATGACAAGCTG
rJMFF015N09+ TAGAAGAGTCCTCTCTAATCGTCGAAGCAATGGAGCTGTCTGGACCTAGATGACAAGCTG
rJMSF006L15+ TAGAAGAGTCCTCTCTAATCGTCGAAGCAATGGAGCTGTCTGGACCTAGATGACAAGCTG
rJMSF041N05+ TAGAAGAGTCCTCTCTAATCGTCGAAGCAATGGAGCTGTCTGGACCTAGATGACAAGCTG
rJMSF043E02+ TAGAAGAGTCCTCTCTAATCGTCGAAGCAATGGAGCTGTCTGGACCTAGATGACAAGCTG
rJMFF026F15+ TAGAAGAGTCCTCTCTAATCGTCGAAGCAATGGAGCTGTCTGGACCTAGATGACAAGCTG
rJMSF033L24+ TAGAAGAGTCCTCTCTAATCGTCGAAGCAATGGAGCTGTCTGGACCTAGATGACAAGCTG
____________________________________________________________
consensus TAGAAGAGTCCTCTCTAATCGTCGAAGCAATGGAGCTGTCTGGACCTAGATGACAAGCTG
. : . : . : . : . : . :
rJMSF025J12+ GTTGGCTTCATATCAGTCTACTCTTCAGATCACACGTACAATATATATATTTATCTTTAT
rJMSF007A24+ GTTGGCTTCATATCAGTCTACTCTTCAGATCACACGTACAATATATATATTTATCTTTAT
rJMFF015N09+ GTTGGCTTCATATCAGTCTACTCTTCAGATCACACGTACAATATATATATTTATCTTTAT
rJMSF006L15+ GTTGGCTTCATATCAGTCTACTCTTCAGATCACACGTACAATATATATATTTATCTTTAT
rJMSF041N05+ GTTGGCTTCATATCAGTCTACTCTTCAGATCACACGTACAATATATATATTTATCTTTAT
rJMSF043E02+ GTTGGCTTCATATCAGTCTACTCTTCAGATCACACGTACAATATATATATTTATCTTTAT
rJMFF026F15+ GTTGGCTTCATATCAGTCTACTCTTCAGATCACACGTACAATATATATATTTATCTTTAT
rJMSF033L24+ GTTGGCTTCATATCAGTCTACTCTTCAGATCACACGTACAATATATATATTTATCTTTAT
____________________________________________________________
consensus GTTGGCTTCATATCAGTCTACTCTTCAGATCACACGTACAATATATATATTTATCTTTAT
. : . : . : . : . : . :
rJMSF025J12+ AGCTCTCTTCAAAAGGGCATGTAATTCACCTGTAAAAAGAAAAGAGGAAGAATCATGTGT
rJMSF007A24+ AGCTCTCTTCAAAAGGGCATGTAATTCACCTGTAAAAAGAAAAGAGGAAGAATCATGTGT
rJMFF015N09+ AGCTCTCTTCAAAAGGGCATGTAATTCACCTGTAAAAAGAAAAGAGGAAGAATCATGTGT
rJMSF006L15+ AGCTCTCTTCAAAAGGGCATGTAATTCACCTGTAAAAAGAAAAGAGGAAGAATCATGTGT
rJMSF041N05+ AGCTCTCTTCAAAAGGGCATGTAATTCACCTGTAAAAAGAAAAGAGGAAGAATCATGTGT
rJMSF043E02+ AGCTCTCTTCAAAAGGGCATGTAATTCACCTGTAAAAAGAAAAGAGGAAGAATCATGTGT
rJMFF026F15+ AGCTCTCTTCAAAAGGGCATGTAATTCACCTGTAAAAAGAAAAGAGGAAGAATCATGTGT
rJMSF033L24+ AGCTCTCTTCAAAAGGGCATGTAATTCACCTGTAAAAAGAAAAGAGGAAGAATCATGTGT
____________________________________________________________
consensus AGCTCTCTTCAAAAGGGCATGTAATTCACCTGTAAAAAGAAAAGAGGAAGAATCATGTGT
. : . : . : . : . : . :
rJMSF025J12+ AGCT
rJMSF007A24+ AGCTTGTAGCTAGGGATTTG
rJMFF015N09+ AGCTTGTAGCTAGGGATTTGGTTTTTGTTGTCAAGATTTCACTTCATAGAGC
rJMSF006L15+ AGCTTGTAGCTAGGGATTTGGTTTTTGTTGTCAAGATTTCACTTCATAGAGCTTCTTCTC
rJMSF041N05+ AGCTTGTAGCTAGGGATTTGGTTTTTGTTGTCAAGATTTCACTTCATAGAGCTTCTTCTC
rJMSF043E02+ AGCTTGTAGCTAGGGATTTGGTTTTTGTTGTCAAGATTTCACTTCATAGAGCTTCTTCTC
rJMFF026F15+ AGCTTGTAGCTAGGGATTTGGTTTTTGTTGTCAAGATTTCACTTCATAGAGCTTCTTCTC
rJMSF033L24+ AGCTTGTAGCTAGGGATTTGGTTCTTGTTGTCAAGATTTCACTTCATAGAGCTTCTTCTC
____________________________________________________________
consensus AGCTTGTAGCTAGGGATTTGGTTTTTGTTGTCAAGATTTCACTTCATAGAGCTTCTTCTC
. : . : . : . : . : . :
rJMSF006L15+ ACAAGCAGTTTGGAAAACATCCATGTGCAGCAGCATCTGTGTATT
rJMSF041N05+ ACAA-CAGTTTGGAAAACAT-CATGTGCAGCAGCATCTGTGTATTATTCATT
rJMSF043E02+ ACAA-CAGTTTGGAAAACAT-CATGTGCAGCAGCATCTGTGTATTATTCATTTACACTTT
rJMFF026F15+ ACAA-CAGTTTGGAAAACAT-CATGTGCAGCAGCATCTGTGTATTATTCATTTACACTTT
rJMSF033L24+ ACAA-CAGTTTGGAAAACAT-CATGTGCAGCAGCATCTGTGTATTATTCATTTACACTTT
____________________________________________________________
consensus ACAA-CAGTTTGGAAAACAT-CATGTGCAGCAGCATCTGTGTATTATTCATTTACACTTT
. : . : . : . : . : . :
rJMSF043E02+ AATGGAGGG
rJMFF026F15+ AATGGAGGG
rJMSF033L24+ AATGGAGGGTGGAGCACAAAGCATTCCTTCCTCGTCGAAACGAAGTTCAAAACAACACTC
____________________________________________________________
consensus AATGGAGGGTGGAGCACAAAGCATTCCTTCCTCGTCGAAACGAAGTTCAAAACAACACTC
. : . : . : . : . : . :
rJMSF033L24+ TTCAACTCTACAGCATATTCATCTTTACACCCAAACAGTATGTTTGGAAGGTAGTTTTAG
____________________________________________________________
consensus TTCAACTCTACAGCATATTCATCTTTACACCCAAACAGTATGTTTGGAAGGTAGTTTTAG
. : . : . : . : . : . :
rJMSF033L24+ GTTGTAGTTTGTTCCACTTTAATTTGCTGTTTATATGTTGAGGTTGTGTACTGGCTGCTG
____________________________________________________________
consensus GTTGTAGTTTGTTCCACTTTAATTTGCTGTTTATATGTTGAGGTTGTGTACTGGCTGCTG